RNA–Protein interactions for RNA: ENST00000532465.1

LMNB2-205, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-205ENST00000532465 MBD4O95243 580 aa22.59■■□□□ 1.21
LMNB2-205ENST00000532465 POLR3DP05423 398 aaPredicted RBP22.59■■□□□ 1.21
LMNB2-205ENST00000532465 EVX2Q03828 476 aa22.59■■□□□ 1.21
LMNB2-205ENST00000532465 TATDN1Q6P1N9 297 aa22.59■■□□□ 1.21
LMNB2-205ENST00000532465 GPATCH3Q96I76 525 aa22.59■■□□□ 1.21
LMNB2-205ENST00000532465 WDR18Q9BV38 432 aa22.59■■□□□ 1.21
LMNB2-205ENST00000532465 MCM9Q9NXL9 1143 aa22.59■■□□□ 1.21
LMNB2-205ENST00000532465 MYH7P12883 1935 aa22.59■■□□□ 1.21
LMNB2-205ENST00000532465 PRKAB2O43741 272 aa22.58■■□□□ 1.21
LMNB2-205ENST00000532465 PSMC4P43686 418 aa22.58■■□□□ 1.21
LMNB2-205ENST00000532465 MTMR2Q13614 643 aa22.58■■□□□ 1.21
LMNB2-205ENST00000532465 UBE3CQ15386 1083 aa22.58■■□□□ 1.21
LMNB2-205ENST00000532465 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.21
LMNB2-205ENST00000532465 TRIM47Q96LD4 638 aa22.58■■□□□ 1.21
LMNB2-205ENST00000532465 DCP1AQ9NPI6 582 aaPredicted RBP22.58■■□□□ 1.21
LMNB2-205ENST00000532465 GINM1Q9NU53 330 aa22.58■■□□□ 1.21
LMNB2-205ENST00000532465 GH2P01242 217 aa22.57■■□□□ 1.2
LMNB2-205ENST00000532465 BACE1P56817 501 aa22.57■■□□□ 1.2
LMNB2-205ENST00000532465 SMCR8Q8TEV9 937 aaPredicted RBP22.57■■□□□ 1.2
LMNB2-205ENST00000532465 FMNL1O95466 1100 aaPredicted RBP22.56■■□□□ 1.2
LMNB2-205ENST00000532465 CYP2D6P10635 497 aa22.56■■□□□ 1.2
LMNB2-205ENST00000532465 SHMT1P34896 483 aa22.56■■□□□ 1.2
LMNB2-205ENST00000532465 ZSCAN25Q6NSZ9 544 aa22.56■■□□□ 1.2
LMNB2-205ENST00000532465 OTUD7AQ8TE49 926 aaPredicted RBP22.56■■□□□ 1.2
LMNB2-205ENST00000532465 ARMC5Q96C12 935 aa22.56■■□□□ 1.2
LMNB2-205ENST00000532465 GNRH1P01148 92 aa22.55■■□□□ 1.2
LMNB2-205ENST00000532465 GABPAQ06546 454 aa22.55■■□□□ 1.2
LMNB2-205ENST00000532465 CERKLQ49MI3 558 aaPredicted RBP22.55■■□□□ 1.2
LMNB2-205ENST00000532465 PUS7LQ9H0K6 701 aaKnown RBP22.55■■□□□ 1.2
LMNB2-205ENST00000532465 PNMA3Q9UL41 463 aa22.55■■□□□ 1.2
LMNB2-205ENST00000532465 USP17L10C9JJH3 530 aa22.54■■□□□ 1.2
LMNB2-205ENST00000532465 OSBPP22059 807 aa22.54■■□□□ 1.2
LMNB2-205ENST00000532465 SLC9C1Q4G0N8 1177 aa22.54■■□□□ 1.2
LMNB2-205ENST00000532465 KBTBD3Q8NAB2 608 aa22.54■■□□□ 1.2
LMNB2-205ENST00000532465 TMOD4Q9NZQ9 345 aa22.54■■□□□ 1.2
LMNB2-205ENST00000532465 SRRDQ9UH36 339 aa22.54■■□□□ 1.2
LMNB2-205ENST00000532465 PABPC4Q13310 644 aaKnown RBP eCLIP22.53■■□□□ 1.26e-9■■■■□ 22.6
LMNB2-205ENST00000532465 ABCB5Q2M3G0 1257 aa22.53■■□□□ 1.2
LMNB2-205ENST00000532465 ANKRD13CQ8N6S4 541 aa22.53■■□□□ 1.2
LMNB2-205ENST00000532465 ASCC2Q9H1I8 757 aaPredicted RBP22.53■■□□□ 1.2
LMNB2-205ENST00000532465 ATP8A2Q9NTI2 1148 aa22.53■■□□□ 1.2
LMNB2-205ENST00000532465 C19orf81C9J6K1 198 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 PRMT2P55345 433 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 FCGRTP55899 365 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 RAB3GAP1Q15042 981 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 SLC44A5Q8NCS7 719 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 PI4K2BQ8TCG2 481 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 SH3TC2Q8TF17 1288 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 ZNF333Q96JL9 665 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 SLC4A4Q9Y6R1 1079 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 BAZ2AQ9UIF9 1905 aaKnown RBP22.52■■□□□ 1.2
LMNB2-205ENST00000532465 TTC41PQ6P2S7 1318 aa22.52■■□□□ 1.2
LMNB2-205ENST00000532465 MGAMO43451 1857 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 CENPFP49454 3210 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 POTEFA5A3E0 1075 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 SMIM22K7EJ46 135 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 HOXD10P28358 340 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 DYNLL2Q96FJ2 89 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 CABP5Q9NP86 173 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 EMILIN3Q9NT22 766 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 MYPNQ86TC9 1320 aa22.51■■□□□ 1.19
LMNB2-205ENST00000532465 CYP2D7A0A087X1C5 515 aa22.5■■□□□ 1.19
LMNB2-205ENST00000532465 GUCY1A2P33402 732 aa22.5■■□□□ 1.19
LMNB2-205ENST00000532465 PRKCZQ05513 592 aa22.5■■□□□ 1.19
LMNB2-205ENST00000532465 HDAC1Q13547 482 aaPredicted RBP22.5■■□□□ 1.19
LMNB2-205ENST00000532465 ZYXQ15942 572 aaKnown RBP22.5■■□□□ 1.19
LMNB2-205ENST00000532465 FAM110CQ1W6H9 321 aa22.5■■□□□ 1.19
LMNB2-205ENST00000532465 ANKRD45Q5TZF3 282 aa22.5■■□□□ 1.19
LMNB2-205ENST00000532465 OSBP2Q969R2 916 aa22.5■■□□□ 1.19
LMNB2-205ENST00000532465 FEZ1Q99689 392 aa22.5■■□□□ 1.19
LMNB2-205ENST00000532465 ERC2O15083 957 aa22.49■■□□□ 1.19
LMNB2-205ENST00000532465 RNF113AO15541 343 aaKnown RBP22.49■■□□□ 1.19
LMNB2-205ENST00000532465 MX1P20591 662 aa22.49■■□□□ 1.19
LMNB2-205ENST00000532465 HOXA7P31268 230 aaPredicted RBP22.49■■□□□ 1.19
LMNB2-205ENST00000532465 IRX3P78415 501 aaPredicted RBP22.49■■□□□ 1.19
LMNB2-205ENST00000532465 USP17L2Q6R6M4 530 aa22.49■■□□□ 1.19
LMNB2-205ENST00000532465 NBPF11Q86T75 865 aa22.49■■□□□ 1.19
LMNB2-205ENST00000532465 ACER1Q8TDN7 264 aa22.49■■□□□ 1.19
LMNB2-205ENST00000532465 GABRQQ9UN88 632 aa22.49■■□□□ 1.19
LMNB2-205ENST00000532465 USP17L12C9JPN9 530 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 USP17L21D6R901 530 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 MPHOSPH10O00566 681 aaKnown RBP22.48■■□□□ 1.19
LMNB2-205ENST00000532465 GLRX3O76003 335 aaKnown RBP22.48■■□□□ 1.19
LMNB2-205ENST00000532465 MYCP01106 439 aaPredicted RBP22.48■■□□□ 1.19
LMNB2-205ENST00000532465 GCLCP48506 637 aaPredicted RBP22.48■■□□□ 1.19
LMNB2-205ENST00000532465 SEPT2Q15019 361 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 C12orf60Q5U649 245 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 RAET1EQ8TD07 263 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 APPBP2Q92624 585 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 GCC1Q96CN9 775 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 STRBPQ96SI9 672 aaKnown RBP22.48■■□□□ 1.19
LMNB2-205ENST00000532465 P2RX7Q99572 595 aaKnown RBP22.48■■□□□ 1.19
LMNB2-205ENST00000532465 SWAP70Q9UH65 585 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 SALL3Q9BXA9 1300 aa22.48■■□□□ 1.19
LMNB2-205ENST00000532465 TNPO2O14787 897 aaKnown RBP22.47■■□□□ 1.19
LMNB2-205ENST00000532465 DDRGK1Q96HY6 314 aa22.47■■□□□ 1.19
LMNB2-205ENST00000532465 ZBTB47Q9UFB7 747 aaPredicted RBP22.47■■□□□ 1.19
LMNB2-205ENST00000532465 KIAA0100Q14667 2235 aaKnown RBP22.46■■□□□ 1.19
LMNB2-205ENST00000532465 PEX10O60683 326 aa22.46■■□□□ 1.19
LMNB2-205ENST00000532465 ZFYP08048 801 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms