RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ARID4AP29374 1257 aaPredicted RBP11.4□□□□□ -0.58
VPS26B-207ENST00000532160 UBXN2AP68543 259 aa11.4□□□□□ -0.58
VPS26B-207ENST00000532160 NUCB1Q02818 461 aa11.4□□□□□ -0.58
VPS26B-207ENST00000532160 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
VPS26B-207ENST00000532160 CHRDL2Q6WN34 429 aa11.4□□□□□ -0.58
VPS26B-207ENST00000532160 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
VPS26B-207ENST00000532160 ANKRD13CQ8N6S4 541 aa11.4□□□□□ -0.58
VPS26B-207ENST00000532160 NKX2-3Q8TAU0 364 aa11.4□□□□□ -0.58
VPS26B-207ENST00000532160 SMCR8Q8TEV9 937 aaPredicted RBP11.4□□□□□ -0.58
VPS26B-207ENST00000532160 U2AF1L4Q8WU68 220 aaKnown RBP11.4□□□□□ -0.58
VPS26B-207ENST00000532160 DPF3Q92784 378 aa11.4□□□□□ -0.58
VPS26B-207ENST00000532160 OSBPL5Q9H0X9 879 aaPredicted RBP11.4□□□□□ -0.58
VPS26B-207ENST00000532160 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.4□□□□□ -0.58
VPS26B-207ENST00000532160 COL2A1P02458 1487 aaPredicted RBP11.39□□□□□ -0.59
VPS26B-207ENST00000532160 MAST2Q6P0Q8 1798 aa11.39□□□□□ -0.59
VPS26B-207ENST00000532160 TNPO2O14787 897 aaKnown RBP11.39□□□□□ -0.59
VPS26B-207ENST00000532160 INHAP05111 366 aa11.39□□□□□ -0.59
VPS26B-207ENST00000532160 TTC39AQ5SRH9 613 aa11.39□□□□□ -0.59
VPS26B-207ENST00000532160 CENPQQ7L2Z9 268 aaPredicted RBP11.39□□□□□ -0.59
VPS26B-207ENST00000532160 SNRKQ9NRH2 765 aa11.39□□□□□ -0.59
VPS26B-207ENST00000532160 RAI14Q9P0K7 980 aa11.39□□□□□ -0.59
VPS26B-207ENST00000532160 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
VPS26B-207ENST00000532160 ALPK3Q96L96 1907 aa11.39□□□□□ -0.59
VPS26B-207ENST00000532160 FOCADQ5VW36 1801 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 FARP2O94887 1054 aaPredicted RBP11.38□□□□□ -0.59
VPS26B-207ENST00000532160 PDE4AP27815 886 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 HMGCS2P54868 508 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 GSTO1P78417 241 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 SPP2Q13103 211 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 CCDC158Q5M9N0 1113 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 TEX11Q8IYF3 940 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 ZNF280CQ8ND82 737 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 SH3RF3Q8TEJ3 882 aaPredicted RBP11.38□□□□□ -0.59
VPS26B-207ENST00000532160 RBM27Q9P2N5 1060 aaKnown RBP11.38□□□□□ -0.59
VPS26B-207ENST00000532160 TAOK2Q9UL54 1235 aa11.38□□□□□ -0.59
VPS26B-207ENST00000532160 SGPL1O95470 568 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 MAP4K4O95819 1239 aaPredicted RBP11.37□□□□□ -0.59
VPS26B-207ENST00000532160 LDHCP07864 332 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 IRF5Q13568 498 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 FAM110CQ1W6H9 321 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 SHROOM1Q2M3G4 852 aaPredicted RBP11.37□□□□□ -0.59
VPS26B-207ENST00000532160 PROCA1Q8NCQ7 364 aaPredicted RBP11.37□□□□□ -0.59
VPS26B-207ENST00000532160 PXYLP1Q8TE99 480 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 HTATIP2Q9BUP3 242 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 BOLA2Q9H3K6 86 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 PNMA3Q9UL41 463 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 PLXNB2O15031 1838 aa11.37□□□□□ -0.59
VPS26B-207ENST00000532160 CAP2P40123 477 aa11.36□□□□□ -0.59
VPS26B-207ENST00000532160 JAG1P78504 1218 aa11.36□□□□□ -0.59
VPS26B-207ENST00000532160 ADGRA1Q86SQ6 560 aa11.36□□□□□ -0.59
VPS26B-207ENST00000532160 COA7Q96BR5 231 aa11.36□□□□□ -0.59
VPS26B-207ENST00000532160 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
VPS26B-207ENST00000532160 DEFB118Q96PH6 123 aa11.36□□□□□ -0.59
VPS26B-207ENST00000532160 ASCC2Q9H1I8 757 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-207ENST00000532160 DNAJC18Q9H819 358 aa11.36□□□□□ -0.59
VPS26B-207ENST00000532160 PAK6Q9NQU5 681 aaPredicted RBP11.36□□□□□ -0.59
VPS26B-207ENST00000532160 AATFQ9NY61 560 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS26B-207ENST00000532160 LRP2BPQ9P2M1 347 aa11.36□□□□□ -0.59
VPS26B-207ENST00000532160 SALL3Q9BXA9 1300 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 USP17L5A8MUK1 530 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 PEX10O60683 326 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 TFRCP02786 760 aaKnown RBP11.35□□□□□ -0.59
VPS26B-207ENST00000532160 CYP2E1P05181 493 aaPredicted RBP11.35□□□□□ -0.59
VPS26B-207ENST00000532160 UQCRFS1P1P0C7P4 283 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 MX1P20591 662 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 ZAP70P43403 619 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 NAA16Q6N069 864 aaPredicted RBP11.35□□□□□ -0.59
VPS26B-207ENST00000532160 PLEKHM2Q8IWE5 1019 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 TGFBRAP1Q8WUH2 860 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 DNAJC2Q99543 621 aaKnown RBP11.35□□□□□ -0.59
VPS26B-207ENST00000532160 PRO3102Q9H379 93 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 ECHDC1Q9NTX5 307 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 HERC5Q9UII4 1024 aaKnown RBP11.35□□□□□ -0.59
VPS26B-207ENST00000532160 FLT1P17948 1338 aa11.35□□□□□ -0.59
VPS26B-207ENST00000532160 GCLCP48506 637 aaPredicted RBP11.34□□□□□ -0.59
VPS26B-207ENST00000532160 PDE1AP54750 535 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 TRIM32Q13049 653 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 MTMR2Q13614 643 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 SH3D19Q5HYK7 790 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 MAPKAPK5Q8IW41 473 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 PI4K2BQ8TCG2 481 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 DIS3LQ8TF46 1054 aaKnown RBP11.34□□□□□ -0.59
VPS26B-207ENST00000532160 NOL10Q9BSC4 688 aaKnown RBP11.34□□□□□ -0.59
VPS26B-207ENST00000532160 TBC1D2Q9BYX2 928 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 CRISPLD2Q9H0B8 497 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 ANTXR1Q9H6X2 564 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 PI4KBQ9UBF8 816 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 GJD2Q9UKL4 321 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 COL6A3P12111 3177 aa11.34□□□□□ -0.59
VPS26B-207ENST00000532160 MYH1P12882 1939 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 GDF11O95390 407 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 ATP5JP18859 108 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 BACE1P56817 501 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 PPP4CP60510 307 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 PABPC4Q13310 644 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS26B-207ENST00000532160 METTL16Q86W50 562 aaKnown RBP11.33□□□□□ -0.6
VPS26B-207ENST00000532160 GPATCH3Q96I76 525 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
VPS26B-207ENST00000532160 WDR18Q9BV38 432 aa11.33□□□□□ -0.6
VPS26B-207ENST00000532160 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms