RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PHIPQ8WWQ0 1821 aa15.21■□□□□ 0.03
CCDC90B-216ENST00000529856 ATAD5Q96QE3 1844 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 PATL2C9JE40 543 aaKnown RBP15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 BTBD19C9JJ37 291 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 ASNSP08243 561 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 SHMT1P34896 483 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 MOGSQ13724 837 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 CTR9Q6PD62 1173 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 CCDC84Q86UT8 332 aaPredicted RBP15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 AMOTL1Q8IY63 956 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 FAM43AQ8N2R8 423 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 R3HDMLQ9H3Y0 253 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 HELLSQ9NRZ9 838 aa15.2■□□□□ 0.02
CCDC90B-216ENST00000529856 CYP2D7A0A087X1C5 515 aa15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 A0A0G2JLL6 359 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 GDF11O95390 407 aa15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 SHROOM1Q2M3G4 852 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 CERKLQ49MI3 558 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 SBK1Q52WX2 424 aa15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 NOM1Q5C9Z4 860 aaKnown RBP15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 PRRT2Q7Z6L0 340 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 WDR18Q9BV38 432 aa15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 ZCCHC17Q9NP64 241 aaKnown RBP15.19■□□□□ 0.02
CCDC90B-216ENST00000529856 CASP8AP2Q9UKL3 1982 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 TRIM75PA6NK02 468 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 SMIM22K7EJ46 135 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 APPP05067 770 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 NEFLP07196 543 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 SDSP20132 328 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 SPP2Q13103 211 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 CCDC129Q6ZRS4 1044 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 CENPQQ7L2Z9 268 aaPredicted RBP15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 ANKRD23Q86SG2 305 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 IFNL3Q8IZI9 196 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 ZNF280CQ8ND82 737 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 DYNLL2Q96FJ2 89 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 FAM227BQ96M60 508 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 AS3MTQ9HBK9 375 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 EPB41L4AQ9HCS5 686 aaPredicted RBP15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 ARPP21Q9UBL0 812 aaPredicted RBP15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 SWAP70Q9UH65 585 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 ZBTB21Q9ULJ3 1066 aa15.18■□□□□ 0.02
CCDC90B-216ENST00000529856 GPR25O00155 361 aa15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 GH2P01242 217 aa15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 CRHR2Q13324 411 aa15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 ABCB5Q2M3G0 1257 aa15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 MCMDC2Q4G0Z9 681 aa15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 TTC22Q5TAA0 569 aa15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 GPAT2Q6NUI2 795 aa15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 FASTKD5Q7L8L6 764 aaKnown RBP15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 NACAP1Q9BZK3 213 aa15.17■□□□□ 0.02
CCDC90B-216ENST00000529856 PTPRFP10586 1907 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 A0A0D9SFI3 127 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 PDHXO00330 501 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 TDO2P48775 406 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 CDK8P49336 464 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 NMIQ13287 307 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 TAF1CQ15572 869 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 C16orf86Q6ZW13 317 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 SLC44A5Q8NCS7 719 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 ZFYVE28Q9HCC9 887 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 CABP5Q9NP86 173 aa15.16■□□□□ 0.02
CCDC90B-216ENST00000529856 MINDY4BA8MYZ0 360 aa15.15■□□□□ 0.02
CCDC90B-216ENST00000529856 GSPT1P15170 499 aaKnown RBP15.15■□□□□ 0.02
CCDC90B-216ENST00000529856 GUCY1A2P33402 732 aa15.15■□□□□ 0.02
CCDC90B-216ENST00000529856 SH3D19Q5HYK7 790 aa15.15■□□□□ 0.02
CCDC90B-216ENST00000529856 GADL1Q6ZQY3 521 aa15.15■□□□□ 0.02
CCDC90B-216ENST00000529856 ZNF296Q8WUU4 475 aaPredicted RBP15.15■□□□□ 0.02
CCDC90B-216ENST00000529856 C19orf81C9J6K1 198 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 HIP1O00291 1037 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 FOXP2O15409 715 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 FKTNO75072 461 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 BACE1P56817 501 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 RAB3GAP1Q15042 981 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 VPS53Q5VIR6 699 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 PROCA1Q8NCQ7 364 aaPredicted RBP15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 CCDC17Q96LX7 622 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 NAPBQ9H115 298 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 SLC45A1Q9Y2W3 748 aa15.14■□□□□ 0.01
CCDC90B-216ENST00000529856 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 TLR2O60603 784 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 AKR1B1P15121 316 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 HMGCS2P54868 508 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 MTMR2Q13614 643 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 SEPT2Q15019 361 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 ALX1Q15699 326 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 ZNF589Q86UQ0 364 aaPredicted RBP15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 DIAPH3Q9NSV4 1193 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 MYH8P13535 1937 aa15.13■□□□□ 0.01
CCDC90B-216ENST00000529856 ROBO3Q96MS0 1386 aa15.12■□□□□ 0.01
CCDC90B-216ENST00000529856 HSPD1P10809 573 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-216ENST00000529856 MFAP1P55081 439 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-216ENST00000529856 TREML2Q5T2D2 321 aa15.12■□□□□ 0.01
CCDC90B-216ENST00000529856 CWC27Q6UX04 472 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms