RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 BCS1LQ9Y276 419 aa5.22□□□□□ -1.57
CD44-226ENST00000527889 INPP5FQ9Y2H2 1132 aa5.22□□□□□ -1.57
CD44-226ENST00000527889 MYH13Q9UKX3 1938 aa5.22□□□□□ -1.57
CD44-226ENST00000527889 CACNA1SQ13698 1873 aa5.22□□□□□ -1.57
CD44-226ENST00000527889 LAMB2P55268 1798 aa5.21□□□□□ -1.57
CD44-226ENST00000527889 RREB1Q92766 1687 aa5.21□□□□□ -1.57
CD44-226ENST00000527889 PRAMEF22A3QJZ6 481 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 ANKRD62A6NC57 917 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 FIGNL2A6NMB9 653 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 TTLL8A6PVC2 850 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 IPO8O15397 1037 aaKnown RBP5.21□□□□□ -1.58
CD44-226ENST00000527889 KCNQ2O43526 872 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 CPNE3O75131 537 aaKnown RBP5.21□□□□□ -1.58
CD44-226ENST00000527889 UPP2O95045 317 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 NCLP19338 710 aaKnown RBP5.21□□□□□ -1.58
CD44-226ENST00000527889 EIF2S2P20042 333 aaKnown RBP5.21□□□□□ -1.58
CD44-226ENST00000527889 MVPQ14764 893 aaKnown RBP5.21□□□□□ -1.58
CD44-226ENST00000527889 C8orf34Q49A92 452 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.21□□□□□ -1.58
CD44-226ENST00000527889 LCE2CQ5TA81 110 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 ITPRIPQ8IWB1 547 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 TMEM57Q8N5G2 664 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 KLRG1Q96E93 195 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 DCAF5Q96JK2 942 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 OSBPL7Q9BZF2 842 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 SLC52A2Q9HAB3 445 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 BABAM1Q9NWV8 329 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 CICQ96RK0 1608 aaPredicted RBP5.21□□□□□ -1.58
CD44-226ENST00000527889 UBR3Q6ZT12 1888 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 ATRNO75882 1429 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 ZNF831Q5JPB2 1677 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 SPATA31A1Q5TZJ5 1347 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 SPATA31A5Q5VU36 1347 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 SPATA31A7Q8IWB4 1347 aa5.21□□□□□ -1.58
CD44-226ENST00000527889 C4AP0C0L4 1744 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 C4BP0C0L5 1744 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 ANXA1P04083 346 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 RPLP1P05386 114 aaKnown RBP5.2□□□□□ -1.58
CD44-226ENST00000527889 HSP90AB1P08238 724 aaKnown RBP5.2□□□□□ -1.58
CD44-226ENST00000527889 TXLNAP40222 546 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 CABP4P57796 275 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 HTRA3P83110 453 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 CCDC30Q5VVM6 783 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 PI16Q6UXB8 463 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 ZNF662Q6ZS27 426 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 HS2ST1Q7LGA3 356 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 SKAP1Q86WV1 359 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 MCF2L2Q86YR7 1114 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 RNF217Q8TC41 542 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 STK31Q9BXU1 1019 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 NIFKQ9BYG3 293 aaKnown RBP5.2□□□□□ -1.58
CD44-226ENST00000527889 PIF1Q9H611 641 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 C12orf49Q9H741 205 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 TMA7Q9Y2S6 64 aaKnown RBP5.2□□□□□ -1.58
CD44-226ENST00000527889 ABCC4O15439 1325 aa5.2□□□□□ -1.58
CD44-226ENST00000527889 A0A1B0GUL6 1792 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 HEG1Q9ULI3 1381 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 TLDC2A0PJX2 215 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 F6X3S4 739 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 GIPC1O14908 333 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 MAN1A2O60476 641 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 MICAL2O94851 1124 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 FGRP09769 529 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 PROSER3Q2NL68 480 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 MEI1Q5TIA1 1274 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 USPL1Q5W0Q7 1092 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 ZNF790Q6PG37 636 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 UNC5CLQ8IV45 518 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 C7orf43Q8WVR3 580 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 ARHGAP45Q92619 1136 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 CCDC74AQ96AQ1 378 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 ZNF496Q96IT1 587 aaPredicted RBP5.19□□□□□ -1.58
CD44-226ENST00000527889 API5Q9BZZ5 524 aaKnown RBP5.19□□□□□ -1.58
CD44-226ENST00000527889 PHAXQ9H814 394 aaKnown RBP5.19□□□□□ -1.58
CD44-226ENST00000527889 POLMQ9NP87 494 aaPredicted RBP5.19□□□□□ -1.58
CD44-226ENST00000527889 FAM13BQ9NYF5 915 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 CHPF2Q9P2E5 772 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 GGT7Q9UJ14 662 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 FOXD3Q9UJU5 478 aaPredicted RBP5.19□□□□□ -1.58
CD44-226ENST00000527889 DDX60Q8IY21 1712 aaKnown RBP5.19□□□□□ -1.58
CD44-226ENST00000527889 PTPRCP08575 1304 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 SOS1Q07889 1333 aaPredicted RBP5.19□□□□□ -1.58
CD44-226ENST00000527889 KDM2BQ8NHM5 1336 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 PXDNLA1KZ92 1463 aa5.19□□□□□ -1.58
CD44-226ENST00000527889 A0A0U1RQG5 324 aaPredicted RBP5.18□□□□□ -1.58
CD44-226ENST00000527889 ERVV-2B6SEH9 535 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 TGFBR3LH3BV60 316 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 MEN1O00255 615 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 EXOC5O00471 708 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 TNFRSF21O75509 655 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 HOXB7P09629 217 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 HSPA1AP0DMV8 641 aaKnown RBP5.18□□□□□ -1.58
CD44-226ENST00000527889 HSPA1BP0DMV9 641 aaKnown RBP5.18□□□□□ -1.58
CD44-226ENST00000527889 IRS1P35568 1242 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 GJA8P48165 433 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 PIP4K2AP48426 406 aaPredicted RBP5.18□□□□□ -1.58
CD44-226ENST00000527889 ST13P50502 369 aaKnown RBP5.18□□□□□ -1.58
CD44-226ENST00000527889 TAF1CQ15572 869 aaPredicted RBP5.18□□□□□ -1.58
CD44-226ENST00000527889 DDB1Q16531 1140 aa5.18□□□□□ -1.58
CD44-226ENST00000527889 SOGA3Q5TF21 947 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms