RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 KCNJ6P48051 423 aa23.41■■□□□ 1.34
SMIM3-201ENST00000526627 LINC00116Q8NCU8 138 aa23.41■■□□□ 1.34
SMIM3-201ENST00000526627 MAN1B1Q9UKM7 699 aa23.41■■□□□ 1.34
SMIM3-201ENST00000526627 PRR29P0C7W0 189 aa23.4■■□□□ 1.34
SMIM3-201ENST00000526627 UBASH3AP57075 661 aa23.4■■□□□ 1.34
SMIM3-201ENST00000526627 PPP4R3BQ5MIZ7 849 aa23.4■■□□□ 1.34
SMIM3-201ENST00000526627 NT5DC1Q5TFE4 455 aa23.4■■□□□ 1.34
SMIM3-201ENST00000526627 OLFM4Q6UX06 510 aa23.4■■□□□ 1.34
SMIM3-201ENST00000526627 SMARCC1Q92922 1105 aaPredicted RBP23.4■■□□□ 1.34
SMIM3-201ENST00000526627 ZSCAN10Q96SZ4 725 aaPredicted RBP23.4■■□□□ 1.34
SMIM3-201ENST00000526627 FANCLQ9NW38 375 aa23.4■■□□□ 1.34
SMIM3-201ENST00000526627 SRPRBQ9Y5M8 271 aaKnown RBP23.4■■□□□ 1.34
SMIM3-201ENST00000526627 FGRP09769 529 aa23.39■■□□□ 1.34
SMIM3-201ENST00000526627 SARSP49591 514 aaKnown RBP23.39■■□□□ 1.34
SMIM3-201ENST00000526627 PPP2R5BQ15173 497 aa23.39■■□□□ 1.34
SMIM3-201ENST00000526627 PPP1R13BQ96KQ4 1090 aa23.39■■□□□ 1.34
SMIM3-201ENST00000526627 BRIP1Q9BX63 1249 aa23.39■■□□□ 1.34
SMIM3-201ENST00000526627 SERTAD1Q9UHV2 236 aa23.39■■□□□ 1.34
SMIM3-201ENST00000526627 POLR2DO15514 142 aaKnown RBP23.39■■□□□ 1.33
SMIM3-201ENST00000526627 POSTNQ15063 836 aa23.39■■□□□ 1.33
SMIM3-201ENST00000526627 BARGINQ6ZT62 677 aa23.39■■□□□ 1.33
SMIM3-201ENST00000526627 CELF1Q92879 486 aaKnown RBP23.39■■□□□ 1.33
SMIM3-201ENST00000526627 CABP5Q9NP86 173 aa23.39■■□□□ 1.33
SMIM3-201ENST00000526627 FAM205CA6NFA0 338 aa23.38■■□□□ 1.33
SMIM3-201ENST00000526627 DHX8Q14562 1220 aaKnown RBP23.38■■□□□ 1.33
SMIM3-201ENST00000526627 USP49Q70CQ1 688 aa23.38■■□□□ 1.33
SMIM3-201ENST00000526627 DLEC1Q9Y238 1755 aa23.38■■□□□ 1.33
SMIM3-201ENST00000526627 PSDA5PKW4 1024 aaPredicted RBP23.38■■□□□ 1.33
SMIM3-201ENST00000526627 INTS13Q9NVM9 706 aa23.38■■□□□ 1.33
SMIM3-201ENST00000526627 ZNF831Q5JPB2 1677 aa23.38■■□□□ 1.33
SMIM3-201ENST00000526627 ACTN4O43707 911 aaKnown RBP23.37■■□□□ 1.33
SMIM3-201ENST00000526627 MYO1BO43795 1136 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 SERPINC1P01008 464 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 CAVIN4Q5BKX8 364 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 EARS2Q5JPH6 523 aaKnown RBP23.37■■□□□ 1.33
SMIM3-201ENST00000526627 FBXO33Q7Z6M2 555 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 PHF20Q9BVI0 1012 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 VPS54Q9P1Q0 977 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 TMEM232C9JQI7 657 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 CBFA2T2O43439 604 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 KLRK1P26718 216 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 CTR9Q6PD62 1173 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 VSTM4Q8IW00 320 aa23.37■■□□□ 1.33
SMIM3-201ENST00000526627 MORC2Q9Y6X9 1032 aaPredicted RBP23.37■■□□□ 1.33
SMIM3-201ENST00000526627 PRPF3O43395 683 aaKnown RBP23.36■■□□□ 1.33
SMIM3-201ENST00000526627 PLEKHA8P1O95397 391 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 ATP2B1P20020 1258 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 SLC10A5Q5PT55 438 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 CSRNP2Q9H175 543 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 TMX1Q9H3N1 280 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 PRDM1O75626 825 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 EVX2Q03828 476 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 FMR1Q06787 632 aaKnown RBP eCLIP23.36■■□□□ 1.33
SMIM3-201ENST00000526627 TROAPQ12815 778 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 MORC3Q14149 939 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 SMIM5Q71RC9 77 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 GRAMD1CQ8IYS0 662 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 HOOK1Q9UJC3 728 aaKnown RBP23.36■■□□□ 1.33
SMIM3-201ENST00000526627 CEP131Q9UPN4 1083 aa23.36■■□□□ 1.33
SMIM3-201ENST00000526627 hCG_1642624A0A1W2PR95 340 aa23.35■■□□□ 1.33
SMIM3-201ENST00000526627 KIF2AO00139 706 aaPredicted RBP23.35■■□□□ 1.33
SMIM3-201ENST00000526627 KCNQ4P56696 695 aa23.35■■□□□ 1.33
SMIM3-201ENST00000526627 CFAP100Q494V2 611 aa23.35■■□□□ 1.33
SMIM3-201ENST00000526627 IFIT1BQ5T764 474 aaKnown RBP23.35■■□□□ 1.33
SMIM3-201ENST00000526627 KIF18AQ8NI77 898 aa23.35■■□□□ 1.33
SMIM3-201ENST00000526627 TBC1D9BQ66K14 1250 aa23.34■■□□□ 1.33
SMIM3-201ENST00000526627 MED15Q96RN5 788 aa23.34■■□□□ 1.33
SMIM3-201ENST00000526627 ZNF215Q9UL58 517 aaPredicted RBP23.34■■□□□ 1.33
SMIM3-201ENST00000526627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.34■■□□□ 1.33
SMIM3-201ENST00000526627 PTPN21Q16825 1174 aa23.34■■□□□ 1.33
SMIM3-201ENST00000526627 BICDL1Q6ZP65 573 aa23.34■■□□□ 1.33
SMIM3-201ENST00000526627 CATIPQ7Z7H3 387 aa23.34■■□□□ 1.33
SMIM3-201ENST00000526627 SPATA20Q8TB22 786 aa23.34■■□□□ 1.33
SMIM3-201ENST00000526627 NSUN4Q96CB9 384 aaKnown RBP23.34■■□□□ 1.33
SMIM3-201ENST00000526627 V9GY48 417 aaPredicted RBP23.34■■□□□ 1.33
SMIM3-201ENST00000526627 WNT7AO00755 349 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 ZNF18P17022 549 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 NPY5RQ15761 445 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 ZNF827Q17R98 1081 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 A0A087X0B3 334 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 USP17L12C9JPN9 530 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 USP17L21D6R901 530 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 PCP11498 1178 aaKnown RBP23.33■■□□□ 1.33
SMIM3-201ENST00000526627 AKAP17AQ02040 695 aaKnown RBP23.33■■□□□ 1.33
SMIM3-201ENST00000526627 PDILTQ8N807 584 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 MLKLQ8NB16 471 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 SMARCE1Q969G3 411 aa23.33■■□□□ 1.33
SMIM3-201ENST00000526627 AATFQ9NY61 560 aaKnown RBP eCLIP23.33■■□□□ 1.33
SMIM3-201ENST00000526627 TRIM75PA6NK02 468 aa23.32■■□□□ 1.32
SMIM3-201ENST00000526627 KRT2P35908 639 aa23.32■■□□□ 1.32
SMIM3-201ENST00000526627 TNFRSF25Q93038 417 aa23.32■■□□□ 1.32
SMIM3-201ENST00000526627 RBM28Q9NW13 759 aaKnown RBP23.32■■□□□ 1.32
SMIM3-201ENST00000526627 SEMA3EO15041 775 aa23.32■■□□□ 1.32
SMIM3-201ENST00000526627 MECOMQ03112 1051 aa23.32■■□□□ 1.32
SMIM3-201ENST00000526627 IQCA1Q86XH1 822 aa23.32■■□□□ 1.32
SMIM3-201ENST00000526627 TRIML1Q8N9V2 468 aa23.32■■□□□ 1.32
SMIM3-201ENST00000526627 ENOX1Q8TC92 643 aaKnown RBP23.32■■□□□ 1.32
SMIM3-201ENST00000526627 XBP1P17861 261 aa23.31■■□□□ 1.32
SMIM3-201ENST00000526627 GOLGA8FQ08AF8 430 aa23.31■■□□□ 1.32
SMIM3-201ENST00000526627 GOLGA8DPQ0D2H9 430 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms