RNA–Protein interactions for RNA: ENST00000525687.5

CNKSR1-210, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 1,200 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-210ENST00000525687 COA7Q96BR5 231 aa16.54■□□□□ 0.24
CNKSR1-210ENST00000525687 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
CNKSR1-210ENST00000525687 UNC93B1Q9H1C4 597 aa16.54■□□□□ 0.24
CNKSR1-210ENST00000525687 GJB1P08034 283 aa16.53■□□□□ 0.24
CNKSR1-210ENST00000525687 GJA8P48165 433 aa16.53■□□□□ 0.24
CNKSR1-210ENST00000525687 GCLCP48506 637 aaPredicted RBP16.53■□□□□ 0.24
CNKSR1-210ENST00000525687 BACE1P56817 501 aa16.53■□□□□ 0.24
CNKSR1-210ENST00000525687 NKX2-3Q8TAU0 364 aa16.53■□□□□ 0.24
CNKSR1-210ENST00000525687 TMOD4Q9NZQ9 345 aa16.53■□□□□ 0.24
CNKSR1-210ENST00000525687 ZBTB21Q9ULJ3 1066 aa16.53■□□□□ 0.24
CNKSR1-210ENST00000525687 MYH1P12882 1939 aa16.53■□□□□ 0.24
CNKSR1-210ENST00000525687 PEX10O60683 326 aa16.52■□□□□ 0.24
CNKSR1-210ENST00000525687 INHAP05111 366 aa16.52■□□□□ 0.24
CNKSR1-210ENST00000525687 IRX3P78415 501 aaPredicted RBP16.52■□□□□ 0.24
CNKSR1-210ENST00000525687 IRF5Q13568 498 aa16.52■□□□□ 0.24
CNKSR1-210ENST00000525687 SIRT2Q8IXJ6 389 aa16.52■□□□□ 0.24
CNKSR1-210ENST00000525687 CLASRPQ8N2M8 674 aaKnown RBP16.52■□□□□ 0.24
CNKSR1-210ENST00000525687 DDX19BQ9UMR2 479 aa16.52■□□□□ 0.24
CNKSR1-210ENST00000525687 C19orf81C9J6K1 198 aa16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 USP17L10C9JJH3 530 aa16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 GH2P01242 217 aa16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 HABP4Q5JVS0 413 aaKnown RBP16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 CERS3Q8IU89 383 aa16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 RPAP2Q8IXW5 612 aaPredicted RBP16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 PXYLP1Q8TE99 480 aa16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 U2AF1L4Q8WU68 220 aaKnown RBP16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 KIF1BPQ96EK5 621 aa16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 ZBTB40Q9NUA8 1239 aa16.51■□□□□ 0.23
CNKSR1-210ENST00000525687 HMMRO75330 724 aa16.5■□□□□ 0.23
CNKSR1-210ENST00000525687 IFIT2P09913 472 aaKnown RBP16.5■□□□□ 0.23
CNKSR1-210ENST00000525687 DNAJC2Q99543 621 aaKnown RBP16.5■□□□□ 0.23
CNKSR1-210ENST00000525687 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
CNKSR1-210ENST00000525687 RIOK1Q9BRS2 568 aaKnown RBP16.5■□□□□ 0.23
CNKSR1-210ENST00000525687 GINM1Q9NU53 330 aa16.5■□□□□ 0.23
CNKSR1-210ENST00000525687 SERPINB13Q9UIV8 391 aa16.5■□□□□ 0.23
CNKSR1-210ENST00000525687 MAGEB6P1A0A0J9YX57 407 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 GOLIM4O00461 696 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 SGPL1O95470 568 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 PDE6AP16499 860 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 HOXA7P31268 230 aaPredicted RBP16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 HERVK_113P62684 666 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 TTF1Q15361 905 aaPredicted RBP16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 ZYXQ15942 572 aaKnown RBP16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 SLC9C2Q5TAH2 1124 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 TATDN1Q6P1N9 297 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 DPF3Q92784 378 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 EDC3Q96F86 508 aaKnown RBP16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 TXNRD2Q9NNW7 524 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 EMILIN3Q9NT22 766 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
CNKSR1-210ENST00000525687 H0YGN5 161 aa16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 PLCD1P51178 756 aa16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 UBE2Q1Q7Z7E8 422 aa16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 TTC6Q86TZ1 520 aa16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 DEFB118Q96PH6 123 aa16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 EHD4Q9H223 541 aa16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 MORF4L1Q9UBU8 362 aa16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 GJD2Q9UKL4 321 aa16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 COLQQ9Y215 455 aaPredicted RBP16.48■□□□□ 0.23
CNKSR1-210ENST00000525687 ZNF532Q9HCE3 1301 aa16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 FARP2O94887 1054 aaPredicted RBP16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 TFRCP02786 760 aaKnown RBP16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 POLR3DP05423 398 aaPredicted RBP16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 EVX2Q03828 476 aa16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 RAB3GAP1Q15042 981 aa16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 CERKLQ49MI3 558 aaPredicted RBP16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 C20orf194Q5TEA3 1177 aa16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 TMED8Q6PL24 325 aaPredicted RBP16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 FEZ1Q99689 392 aa16.47■□□□□ 0.23
CNKSR1-210ENST00000525687 RAB11FIP3O75154 756 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 TRIM32Q13049 653 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 ABCB5Q2M3G0 1257 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 Q3C1V9 767 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 SDR42E1Q8WUS8 393 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 YTHDC1Q96MU7 727 aaKnown RBP16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 CRNKL1Q9BZJ0 848 aaKnown RBP16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 BOLA2Q9H3K6 86 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 PAK6Q9NQU5 681 aaPredicted RBP16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 RBPJLQ9UBG7 517 aa16.46■□□□□ 0.23
CNKSR1-210ENST00000525687 TCRBV5S4A2TA0A5A2 114 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 HMGCRP04035 888 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 CYP2B6P20813 491 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 SHMT1P34896 483 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 POTEEQ6S8J3 1075 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 LCORLQ8N3X6 602 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 ACER1Q8TDN7 264 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 HTATIP2Q9BUP3 242 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 CABP5Q9NP86 173 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 MCM9Q9NXL9 1143 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 NAV1Q8NEY1 1877 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 DDX60LQ5H9U9 1706 aaKnown RBP16.45■□□□□ 0.22
CNKSR1-210ENST00000525687 CENPBP07199 599 aaPredicted RBP16.44■□□□□ 0.22
CNKSR1-210ENST00000525687 ERVK-9P63128 1117 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms