RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 SHROOM1Q2M3G4 852 aaPredicted RBP11.48□□□□□ -0.57
SF3B2-204ENST00000525207 SLC4A8Q2Y0W8 1093 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 SH3D19Q5HYK7 790 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 DNAJC2Q99543 621 aaKnown RBP11.48□□□□□ -0.57
SF3B2-204ENST00000525207 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 EHD4Q9H223 541 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 AS3MTQ9HBK9 375 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 GINM1Q9NU53 330 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 ZBTB21Q9ULJ3 1066 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 MYPNQ86TC9 1320 aa11.48□□□□□ -0.57
SF3B2-204ENST00000525207 PLXNB2O15031 1838 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 GOLIM4O00461 696 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 FMNL1O95466 1100 aaPredicted RBP11.47□□□□□ -0.57
SF3B2-204ENST00000525207 USP5P45974 858 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 FCGRTP55899 365 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 JAG1P78504 1218 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 PRKCZQ05513 592 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 MTMR2Q13614 643 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 FAM110CQ1W6H9 321 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 NBPF11Q86T75 865 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 FOXP4Q8IVH2 680 aaPredicted RBP11.47□□□□□ -0.57
SF3B2-204ENST00000525207 SH3TC2Q8TF17 1288 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 WDR18Q9BV38 432 aa11.47□□□□□ -0.57
SF3B2-204ENST00000525207 ZNF532Q9HCE3 1301 aa11.46□□□□□ -0.57
SF3B2-204ENST00000525207 TCRBV5S4A2TA0A5A2 114 aa11.46□□□□□ -0.57
SF3B2-204ENST00000525207 HOXD10P28358 340 aa11.46□□□□□ -0.57
SF3B2-204ENST00000525207 BACE1P56817 501 aa11.46□□□□□ -0.57
SF3B2-204ENST00000525207 SLC9C2Q5TAH2 1124 aa11.46□□□□□ -0.57
SF3B2-204ENST00000525207 PRPF38BQ5VTL8 546 aaKnown RBP11.46□□□□□ -0.57
SF3B2-204ENST00000525207 EDC3Q96F86 508 aaKnown RBP11.46□□□□□ -0.57
SF3B2-204ENST00000525207 LRRCC1Q9C099 1032 aa11.46□□□□□ -0.57
SF3B2-204ENST00000525207 SERPINB13Q9UIV8 391 aa11.46□□□□□ -0.57
SF3B2-204ENST00000525207 MAGEB6P1A0A0J9YX57 407 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 ATP5JP18859 108 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 PABPC4Q13310 644 aaKnown RBP eCLIP11.45□□□□□ -0.58
SF3B2-204ENST00000525207 TATDN1Q6P1N9 297 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 ANKRD13CQ8N6S4 541 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 RAET1EQ8TD07 263 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 CRNKL1Q9BZJ0 848 aaKnown RBP11.45□□□□□ -0.58
SF3B2-204ENST00000525207 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 ASCC2Q9H1I8 757 aaPredicted RBP11.45□□□□□ -0.58
SF3B2-204ENST00000525207 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 PAG1Q9NWQ8 432 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 A0A0G2JMZ2 1700 aa11.45□□□□□ -0.58
SF3B2-204ENST00000525207 USP17L10C9JJH3 530 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 TNPO2O14787 897 aaKnown RBP11.44□□□□□ -0.58
SF3B2-204ENST00000525207 GH2P01242 217 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 EN2P19622 333 aaPredicted RBP11.44□□□□□ -0.58
SF3B2-204ENST00000525207 GRK4P32298 578 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 ADD2P35612 726 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 GCLCP48506 637 aaPredicted RBP11.44□□□□□ -0.58
SF3B2-204ENST00000525207 GABPAQ06546 454 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 TTC6Q86TZ1 520 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 LCORLQ8N3X6 602 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 SLAIN1Q8ND83 568 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 HAUS7Q99871 368 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 TMOD4Q9NZQ9 345 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 GABRQQ9UN88 632 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 PARP14Q460N5 1801 aa11.44□□□□□ -0.58
SF3B2-204ENST00000525207 GREB1LQ9C091 1923 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-204ENST00000525207 C19orf81C9J6K1 198 aa11.43□□□□□ -0.58
SF3B2-204ENST00000525207 SMARCA5O60264 1052 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-204ENST00000525207 MYCP01106 439 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-204ENST00000525207 HOXA7P31268 230 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-204ENST00000525207 SHMT1P34896 483 aa11.43□□□□□ -0.58
SF3B2-204ENST00000525207 PLCD1P51178 756 aa11.43□□□□□ -0.58
SF3B2-204ENST00000525207 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-204ENST00000525207 IRF5Q13568 498 aa11.43□□□□□ -0.58
SF3B2-204ENST00000525207 MTFR1Q15390 333 aa11.43□□□□□ -0.58
SF3B2-204ENST00000525207 SDR42E1Q8WUS8 393 aa11.43□□□□□ -0.58
SF3B2-204ENST00000525207 SHISA4Q96DD7 197 aa11.43□□□□□ -0.58
SF3B2-204ENST00000525207 C12orf42Q96LP6 360 aa11.43□□□□□ -0.58
SF3B2-204ENST00000525207 DCP1AQ9NPI6 582 aaPredicted RBP11.43□□□□□ -0.58
SF3B2-204ENST00000525207 MBD4O95243 580 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 FLT3LGP49771 235 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 EVX2Q03828 476 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 SLFNL1Q499Z3 407 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 FEZ1Q99689 392 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.42□□□□□ -0.584e-6■■■□□ 18.8
SF3B2-204ENST00000525207 ARMT1Q9H993 441 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 MCM9Q9NXL9 1143 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 MORF4L1Q9UBU8 362 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 RLFQ13129 1914 aa11.42□□□□□ -0.58
SF3B2-204ENST00000525207 CHGBP05060 677 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 POLR3DP05423 398 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-204ENST00000525207 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
SF3B2-204ENST00000525207 HERVK_113P62684 666 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 UBXN2AP68543 259 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 UBE3CQ15386 1083 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 ABCB5Q2M3G0 1257 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 CERKLQ49MI3 558 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-204ENST00000525207 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 PXYLP1Q8TE99 480 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 GTF3C2Q8WUA4 911 aaPredicted RBP11.41□□□□□ -0.58
SF3B2-204ENST00000525207 COA7Q96BR5 231 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 DCTPP1Q9H773 170 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 EMILIN3Q9NT22 766 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 ECHDC1Q9NTX5 307 aa11.41□□□□□ -0.58
SF3B2-204ENST00000525207 ZNF236Q9UL36 1845 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms