RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CTGFP29279 349 aa22.44■■□□□ 1.18
CAPN1-203ENST00000525013 WDR18Q9BV38 432 aa22.44■■□□□ 1.18
CAPN1-203ENST00000525013 ECHDC1Q9NTX5 307 aa22.44■■□□□ 1.18
CAPN1-203ENST00000525013 GINM1Q9NU53 330 aa22.44■■□□□ 1.18
CAPN1-203ENST00000525013 PNMA3Q9UL41 463 aa22.44■■□□□ 1.18
CAPN1-203ENST00000525013 ZBTB21Q9ULJ3 1066 aa22.44■■□□□ 1.18
CAPN1-203ENST00000525013 PCDHB15Q9Y5E8 787 aa22.44■■□□□ 1.18
CAPN1-203ENST00000525013 HOXD10P28358 340 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 ADD2P35612 726 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 PRMT2P55345 433 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 PABPC4Q13310 644 aaKnown RBP eCLIP22.43■■□□□ 1.18
CAPN1-203ENST00000525013 MTMR2Q13614 643 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 SLFNL1Q499Z3 407 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 LCORLQ8N3X6 602 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 GPATCH3Q96I76 525 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 EHD4Q9H223 541 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 ARMT1Q9H993 441 aa22.43■■□□□ 1.18
CAPN1-203ENST00000525013 GH2P01242 217 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 OSBPP22059 807 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 PLCD1P51178 756 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 FCGRTP55899 365 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 BACE1P56817 501 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 SDR42E1Q8WUS8 393 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 MCM9Q9NXL9 1143 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 TMOD4Q9NZQ9 345 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 SRRDQ9UH36 339 aa22.42■■□□□ 1.18
CAPN1-203ENST00000525013 MBD4O95243 580 aa22.41■■□□□ 1.18
CAPN1-203ENST00000525013 MYCP01106 439 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-203ENST00000525013 SH3D19Q5HYK7 790 aa22.41■■□□□ 1.18
CAPN1-203ENST00000525013 SH3TC2Q8TF17 1288 aa22.41■■□□□ 1.18
CAPN1-203ENST00000525013 DOCK3Q8IZD9 2030 aa22.41■■□□□ 1.18
CAPN1-203ENST00000525013 BAZ2AQ9UIF9 1905 aaKnown RBP22.41■■□□□ 1.18
CAPN1-203ENST00000525013 POTEFA5A3E0 1075 aa22.4■■□□□ 1.18
CAPN1-203ENST00000525013 USP17L10C9JJH3 530 aa22.4■■□□□ 1.18
CAPN1-203ENST00000525013 CERKLQ49MI3 558 aaPredicted RBP22.4■■□□□ 1.18
CAPN1-203ENST00000525013 TATDN1Q6P1N9 297 aa22.4■■□□□ 1.18
CAPN1-203ENST00000525013 ANKRD13CQ8N6S4 541 aa22.4■■□□□ 1.18
CAPN1-203ENST00000525013 RAET1EQ8TD07 263 aa22.4■■□□□ 1.18
CAPN1-203ENST00000525013 ZNF333Q96JL9 665 aa22.4■■□□□ 1.18
CAPN1-203ENST00000525013 CRBNQ96SW2 442 aa22.4■■□□□ 1.18
CAPN1-203ENST00000525013 TMEM106CQ9BVX2 250 aa22.4■■□□□ 1.18
CAPN1-203ENST00000525013 DDX60LQ5H9U9 1706 aaKnown RBP22.4■■□□□ 1.18
CAPN1-203ENST00000525013 MYPNQ86TC9 1320 aa22.39■■□□□ 1.18
CAPN1-203ENST00000525013 C19orf81C9J6K1 198 aa22.39■■□□□ 1.17
CAPN1-203ENST00000525013 RAB3GAP1Q15042 981 aa22.39■■□□□ 1.17
CAPN1-203ENST00000525013 ABCB5Q2M3G0 1257 aa22.39■■□□□ 1.17
CAPN1-203ENST00000525013 TSHZ3Q63HK5 1081 aa22.39■■□□□ 1.17
CAPN1-203ENST00000525013 ZSCAN25Q6NSZ9 544 aa22.39■■□□□ 1.17
CAPN1-203ENST00000525013 ASCC2Q9H1I8 757 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-203ENST00000525013 DCP1AQ9NPI6 582 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-203ENST00000525013 PRKAB2O43741 272 aa22.38■■□□□ 1.17
CAPN1-203ENST00000525013 CHGBP05060 677 aa22.38■■□□□ 1.17
CAPN1-203ENST00000525013 GCLCP48506 637 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-203ENST00000525013 IRX3P78415 501 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-203ENST00000525013 UBE3CQ15386 1083 aa22.38■■□□□ 1.17
CAPN1-203ENST00000525013 CABP5Q9NP86 173 aa22.38■■□□□ 1.17
CAPN1-203ENST00000525013 MYH8P13535 1937 aa22.37■■□□□ 1.17
CAPN1-203ENST00000525013 SHMT1P34896 483 aa22.37■■□□□ 1.17
CAPN1-203ENST00000525013 PRKCZQ05513 592 aa22.37■■□□□ 1.17
CAPN1-203ENST00000525013 FEZ1Q99689 392 aa22.37■■□□□ 1.17
CAPN1-203ENST00000525013 RBBP6Q7Z6E9 1792 aaKnown RBP22.37■■□□□ 1.17
CAPN1-203ENST00000525013 TNPO2O14787 897 aaKnown RBP22.36■■□□□ 1.17
CAPN1-203ENST00000525013 CYP2D6P10635 497 aa22.36■■□□□ 1.17
CAPN1-203ENST00000525013 EVX2Q03828 476 aa22.36■■□□□ 1.17
CAPN1-203ENST00000525013 USP17L2Q6R6M4 530 aa22.36■■□□□ 1.17
CAPN1-203ENST00000525013 BIN2Q9UBW5 565 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-203ENST00000525013 GRK4P32298 578 aa22.35■■□□□ 1.17
CAPN1-203ENST00000525013 ZYXQ15942 572 aaKnown RBP22.35■■□□□ 1.17
CAPN1-203ENST00000525013 FAM110CQ1W6H9 321 aa22.35■■□□□ 1.17
CAPN1-203ENST00000525013 DDRGK1Q96HY6 314 aa22.35■■□□□ 1.17
CAPN1-203ENST00000525013 ATP8A2Q9NTI2 1148 aa22.35■■□□□ 1.17
CAPN1-203ENST00000525013 GABRQQ9UN88 632 aa22.35■■□□□ 1.17
CAPN1-203ENST00000525013 MPHOSPH10O00566 681 aaKnown RBP22.34■■□□□ 1.17
CAPN1-203ENST00000525013 EN2P19622 333 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-203ENST00000525013 HOXA7P31268 230 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-203ENST00000525013 GABPAQ06546 454 aa22.34■■□□□ 1.17
CAPN1-203ENST00000525013 AMOTL1Q8IY63 956 aa22.34■■□□□ 1.17
CAPN1-203ENST00000525013 KBTBD3Q8NAB2 608 aa22.34■■□□□ 1.17
CAPN1-203ENST00000525013 P2RX7Q99572 595 aaKnown RBP22.34■■□□□ 1.17
CAPN1-203ENST00000525013 PUS7LQ9H0K6 701 aaKnown RBP22.34■■□□□ 1.17
CAPN1-203ENST00000525013 EMILIN3Q9NT22 766 aa22.34■■□□□ 1.17
CAPN1-203ENST00000525013 ZBTB47Q9UFB7 747 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-203ENST00000525013 SLC4A4Q9Y6R1 1079 aa22.34■■□□□ 1.17
CAPN1-203ENST00000525013 SLC44A5Q8NCS7 719 aa22.33■■□□□ 1.17
CAPN1-203ENST00000525013 COA7Q96BR5 231 aa22.33■■□□□ 1.17
CAPN1-203ENST00000525013 DYNLL2Q96FJ2 89 aa22.33■■□□□ 1.17
CAPN1-203ENST00000525013 FLT3LGP49771 235 aa22.32■■□□□ 1.16
CAPN1-203ENST00000525013 ACER1Q8TDN7 264 aa22.32■■□□□ 1.16
CAPN1-203ENST00000525013 OTUD7AQ8TE49 926 aaPredicted RBP22.32■■□□□ 1.16
CAPN1-203ENST00000525013 TAOK2Q9UL54 1235 aa22.32■■□□□ 1.16
CAPN1-203ENST00000525013 TTC41PQ6P2S7 1318 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 CYP2D7A0A087X1C5 515 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L12C9JPN9 530 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 USP17L21D6R901 530 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 ERC2O15083 957 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 USP14P54578 494 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 HERVK_113P62684 666 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 SEPT2Q15019 361 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 SWAP70Q9UH65 585 aa22.31■■□□□ 1.16
CAPN1-203ENST00000525013 RNF113AO15541 343 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms