RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 IFNL3Q8IZI9 196 aa18.08■□□□□ 0.48
SF3B2-202ENST00000524475 FAM227BQ96M60 508 aa18.08■□□□□ 0.48
SF3B2-202ENST00000524475 AFG3L2Q9Y4W6 797 aa18.08■□□□□ 0.48
SF3B2-202ENST00000524475 CCDC171Q6TFL3 1326 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 FOXN1O15353 648 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 FOXP2O15409 715 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 CYP2D6P10635 497 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 CTCFP49711 727 aaPredicted RBP18.07■□□□□ 0.48
SF3B2-202ENST00000524475 ALX1Q15699 326 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 SLC4A8Q2Y0W8 1093 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 NOM1Q5C9Z4 860 aaKnown RBP18.07■□□□□ 0.48
SF3B2-202ENST00000524475 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 IFNL1Q8IU54 200 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 BRI3BPQ8WY22 251 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 WDR18Q9BV38 432 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 DIAPH3Q9NSV4 1193 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 RNF186Q9NXI6 227 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 ZBTB21Q9ULJ3 1066 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 ZHX2Q9Y6X8 837 aa18.07■□□□□ 0.48
SF3B2-202ENST00000524475 A0A0G2JLL6 359 aaPredicted RBP18.06■□□□□ 0.48
SF3B2-202ENST00000524475 USP17L5A8MUK1 530 aa18.06■□□□□ 0.48
SF3B2-202ENST00000524475 TDO2P48775 406 aa18.06■□□□□ 0.48
SF3B2-202ENST00000524475 CERKLQ49MI3 558 aaPredicted RBP18.06■□□□□ 0.48
SF3B2-202ENST00000524475 PRRT2Q7Z6L0 340 aaPredicted RBP18.06■□□□□ 0.48
SF3B2-202ENST00000524475 AS3MTQ9HBK9 375 aa18.06■□□□□ 0.48
SF3B2-202ENST00000524475 RAD50Q92878 1312 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 LOC285556D6RIA3 1793 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 CCL15-CCL14A0A0B4J2E2 113 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 IGF2BP3O00425 579 aaKnown RBP eCLIP18.05■□□□□ 0.48
SF3B2-202ENST00000524475 APPP05067 770 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 CCL15Q16663 113 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 BMP2KLQ5H9B9 411 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 CCDC129Q6ZRS4 1044 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 ZNF280CQ8ND82 737 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 CCDC17Q96LX7 622 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 PTPN18Q99952 460 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 NAPBQ9H115 298 aa18.05■□□□□ 0.48
SF3B2-202ENST00000524475 HSPA8P11142 646 aaKnown RBP18.04■□□□□ 0.48
SF3B2-202ENST00000524475 CDK8P49336 464 aa18.04■□□□□ 0.48
SF3B2-202ENST00000524475 JAG1P78504 1218 aa18.04■□□□□ 0.48
SF3B2-202ENST00000524475 EVX2Q03828 476 aa18.04■□□□□ 0.48
SF3B2-202ENST00000524475 MOGSQ13724 837 aa18.04■□□□□ 0.48
SF3B2-202ENST00000524475 ABCB5Q2M3G0 1257 aa18.04■□□□□ 0.48
SF3B2-202ENST00000524475 FASTKD5Q7L8L6 764 aaKnown RBP18.04■□□□□ 0.48
SF3B2-202ENST00000524475 ZNF589Q86UQ0 364 aaPredicted RBP18.04■□□□□ 0.48
SF3B2-202ENST00000524475 PRDM10Q9NQV6 1147 aa18.04■□□□□ 0.48
SF3B2-202ENST00000524475 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.04■□□□□ 0.48
SF3B2-202ENST00000524475 CYP2D7A0A087X1C5 515 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 TRPA1O75762 1119 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 GDF11O95390 407 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 GH2P01242 217 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 HSPD1P10809 573 aaKnown RBP18.03■□□□□ 0.48
SF3B2-202ENST00000524475 SH3D19Q5HYK7 790 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 VPS53Q5VIR6 699 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 CWC27Q6UX04 472 aaKnown RBP18.03■□□□□ 0.48
SF3B2-202ENST00000524475 ANKRD23Q86SG2 305 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 DYNLL2Q96FJ2 89 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 ZNF287Q9HBT7 754 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 ANAPC4Q9UJX5 808 aa18.03■□□□□ 0.48
SF3B2-202ENST00000524475 GREB1LQ9C091 1923 aaPredicted RBP18.03■□□□□ 0.48
SF3B2-202ENST00000524475 CHMLP26374 656 aa18.02■□□□□ 0.48
SF3B2-202ENST00000524475 TMEM179Q6ZVK1 233 aa18.02■□□□□ 0.48
SF3B2-202ENST00000524475 PROCA1Q8NCQ7 364 aaPredicted RBP18.02■□□□□ 0.48
SF3B2-202ENST00000524475 SLC44A5Q8NCS7 719 aa18.02■□□□□ 0.48
SF3B2-202ENST00000524475 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.02■□□□□ 0.48
SF3B2-202ENST00000524475 SLC45A1Q9Y2W3 748 aa18.02■□□□□ 0.48
SF3B2-202ENST00000524475 MINDY4BA8MYZ0 360 aa18.01■□□□□ 0.47
SF3B2-202ENST00000524475 BTBD19C9JJ37 291 aa18.01■□□□□ 0.47
SF3B2-202ENST00000524475 SLC3A2P08195 630 aaKnown RBP18.01■□□□□ 0.47
SF3B2-202ENST00000524475 PPARAQ07869 468 aa18.01■□□□□ 0.47
SF3B2-202ENST00000524475 RUFY2Q8WXA3 655 aa18.01■□□□□ 0.47
SF3B2-202ENST00000524475 DSCC1Q9BVC3 393 aa18.01■□□□□ 0.47
SF3B2-202ENST00000524475 LAMA4Q16363 1823 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 TRIM75PA6NK02 468 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 C19orf81C9J6K1 198 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 SMIM22K7EJ46 135 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 FGAP02671 866 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 GUCY1A2P33402 732 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 BACE1P56817 501 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 SPP2Q13103 211 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 SHROOM1Q2M3G4 852 aaPredicted RBP18■□□□□ 0.47
SF3B2-202ENST00000524475 CCDC84Q86UT8 332 aaPredicted RBP18■□□□□ 0.47
SF3B2-202ENST00000524475 FAM43AQ8N2R8 423 aa18■□□□□ 0.47
SF3B2-202ENST00000524475 USP17L10C9JJH3 530 aa17.99■□□□□ 0.47
SF3B2-202ENST00000524475 FGRP09769 529 aa17.99■□□□□ 0.47
SF3B2-202ENST00000524475 PDE4BQ07343 736 aa17.99■□□□□ 0.47
SF3B2-202ENST00000524475 GPAT2Q6NUI2 795 aa17.99■□□□□ 0.47
SF3B2-202ENST00000524475 C12orf42Q96LP6 360 aa17.99■□□□□ 0.47
SF3B2-202ENST00000524475 PLIN4Q96Q06 1357 aa17.99■□□□□ 0.47
SF3B2-202ENST00000524475 PCP11498 1178 aaKnown RBP17.98■□□□□ 0.47
SF3B2-202ENST00000524475 AKR1B1P15121 316 aa17.98■□□□□ 0.47
SF3B2-202ENST00000524475 RASA1P20936 1047 aa17.98■□□□□ 0.47
SF3B2-202ENST00000524475 NT5C2P49902 561 aa17.98■□□□□ 0.47
SF3B2-202ENST00000524475 LBX1P52954 281 aa17.98■□□□□ 0.47
SF3B2-202ENST00000524475 RAB3GAP1Q15042 981 aa17.98■□□□□ 0.47
SF3B2-202ENST00000524475 KIAA1683Q9H0B3 1180 aa17.98■□□□□ 0.47
SF3B2-202ENST00000524475 MKNK2Q9HBH9 465 aa17.98■□□□□ 0.47
SF3B2-202ENST00000524475 AGTPBP1Q9UPW5 1226 aa17.98■□□□□ 0.47
SF3B2-202ENST00000524475 SGSM2O43147 1006 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms