RNA–Protein interactions for RNA: ENST00000523805.5

PTK2-253, Transcript of protein tyrosine kinase 2, human

TSL 3

Gene PTK2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-253	ENST00000523805	RBM5	P52756	815 aa	Known RBP eCLIP	10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	LDHAL6A	Q6ZMR3	332 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	ZNF804A	Q7Z570	1209 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	LINC00528	Q8N1L1	170 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	ZSCAN1	Q8NBB4	408 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	SUCLG2	Q96I99	432 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	CSRNP1	Q96S65	589 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	SRCIN1	Q9C0H9	1055 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	VEZT	Q9HBM0	779 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	AK9	Q5TCS8	1911 aa		10.13	□□□□□ -0.79
PTK2-253	ENST00000523805	AOX1	Q06278	1338 aa		10.12	□□□□□ -0.79
PTK2-253	ENST00000523805	TBC1D8	O95759	1140 aa		10.12	□□□□□ -0.79
PTK2-253	ENST00000523805	GYG1	P46976	350 aa		10.12	□□□□□ -0.79
PTK2-253	ENST00000523805	DLGAP5	Q15398	846 aa		10.12	□□□□□ -0.79
PTK2-253	ENST00000523805	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.12	□□□□□ -0.79
PTK2-253	ENST00000523805	PUS3	Q9BZE2	481 aa	Known RBP	10.12	□□□□□ -0.79
PTK2-253	ENST00000523805	ANGEL1	Q9UNK9	670 aa	Known RBP	10.12	□□□□□ -0.79
PTK2-253	ENST00000523805	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.12	□□□□□ -0.79
PTK2-253	ENST00000523805	IRS2	Q9Y4H2	1338 aa		10.11	□□□□□ -0.79
PTK2-253	ENST00000523805	SSC5D	A1L4H1	1573 aa		10.11	□□□□□ -0.79
PTK2-253	ENST00000523805	NBPF7	P0C2Y1	421 aa	Predicted RBP	10.11	□□□□□ -0.79
PTK2-253	ENST00000523805	SOX10	P56693	466 aa		10.11	□□□□□ -0.79
PTK2-253	ENST00000523805	FKBP1B	P68106	108 aa		10.11	□□□□□ -0.79
PTK2-253	ENST00000523805	CFAP100	Q494V2	611 aa		10.11	□□□□□ -0.79
PTK2-253	ENST00000523805	C6orf118	Q5T5N4	469 aa		10.11	□□□□□ -0.79
PTK2-253	ENST00000523805	MAGEB6P1	A0A0J9YX57	407 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	FAM181B	A6NEQ2	426 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	CCER2	I3L3R5	266 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	ALDH1L1	O75891	902 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	PTPN12	Q05209	780 aa	Known RBP	10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	CHAF1A	Q13111	956 aa	Predicted RBP	10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	VASH1	Q7L8A9	365 aa	Predicted RBP	10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	ARMC9	Q7Z3E5	817 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	KLHDC4	Q8TBB5	520 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	BICC1	Q9H694	974 aa	Known RBP	10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	POLR3E	Q9NVU0	708 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	SAGE1	Q9NXZ1	904 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	LAMB1	P07942	1786 aa		10.1	□□□□□ -0.79
PTK2-253	ENST00000523805	MYO1B	O43795	1136 aa		10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	MAN1A2	O60476	641 aa		10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	MLLT1	Q03111	559 aa	Predicted RBP	10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	MFSD14B	Q5SR56	506 aa		10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	KAZALD1	Q96I82	304 aa		10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	CLMN	Q96JQ2	1002 aa		10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	DEFB129	Q9H1M3	183 aa		10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	TTF2	Q9UNY4	1162 aa	Known RBP	10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	COL1A1	P02452	1464 aa	Predicted RBP	10.09	□□□□□ -0.79
PTK2-253	ENST00000523805	ZNF521	Q96K83	1311 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	UPP2	O95045	317 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	BMP2	P12643	396 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	IL1R1	P14778	569 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	CTDSPL2	Q05D32	466 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	LRRC24	Q50LG9	513 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	METTL24	Q5JXM2	366 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	VPS37D	Q86XT2	251 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	CCDC116	Q8IYX3	515 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	SSH1	Q8WYL5	1049 aa		10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	ZBED3	Q96IU2	234 aa	Predicted RBP	10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	PRMT6	Q96LA8	375 aa	Predicted RBP	10.08	□□□□□ -0.8
PTK2-253	ENST00000523805	FRAT2	O75474	233 aa	Predicted RBP	10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	HIBADH	P31937	336 aa	Known RBP	10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	GRIK5	Q16478	980 aa		10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	NBPF12	Q5TAG4	269 aa	Predicted RBP	10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	C15orf52	Q6ZUT6	534 aa	Known RBP	10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	CTU1	Q7Z7A3	348 aa	Known RBP	10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	ANKRD44	Q8N8A2	993 aa		10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	ZNF296	Q8WUU4	475 aa	Predicted RBP	10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	TDRD3	Q9H7E2	651 aa	Known RBP	10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	SMC4	Q9NTJ3	1288 aa		10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	DNMT3L	Q9UJW3	386 aa		10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	ZSWIM8	A7E2V4	1837 aa		10.07	□□□□□ -0.8
PTK2-253	ENST00000523805	TCP10L2	B9ZVM9	353 aa		10.06	□□□□□ -0.8
PTK2-253	ENST00000523805	CACNB3	P54284	484 aa		10.06	□□□□□ -0.8
PTK2-253	ENST00000523805	SREBF2	Q12772	1141 aa		10.06	□□□□□ -0.8
PTK2-253	ENST00000523805	UBE4A	Q14139	1066 aa		10.06	□□□□□ -0.8
PTK2-253	ENST00000523805	PDXDC2P	Q6P474	469 aa		10.06	□□□□□ -0.8
PTK2-253	ENST00000523805	FAM84B	Q96KN1	310 aa	Predicted RBP	10.06	□□□□□ -0.8
PTK2-253	ENST00000523805	TSEN34	Q9BSV6	310 aa	Known RBP	10.06	□□□□□ -0.8
PTK2-253	ENST00000523805	R3HDML	Q9H3Y0	253 aa		10.06	□□□□□ -0.8
PTK2-253	ENST00000523805	MROH5	Q6ZUA9	1318 aa		10.06	□□□□□ -0.8
PTK2-253	ENST00000523805		E9PSI1	815 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	PPP1R12B	O60237	982 aa	Predicted RBP	10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	RASA3	Q14644	834 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	SH3D19	Q5HYK7	790 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	TDRD7	Q8NHU6	1098 aa	Known RBP	10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	LRRN4	Q8WUT4	740 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	SLC10A4	Q96EP9	437 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	WNK4	Q96J92	1243 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	SIL1	Q9H173	461 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	ELP3	Q9H9T3	547 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	ZNF70	Q9UC06	446 aa	Predicted RBP	10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	FKBPL	Q9UIM3	349 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	RIPOR2	Q9Y4F9	1068 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	MYH2	Q9UKX2	1941 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	DOCK2	Q92608	1830 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	PTPRC	P08575	1304 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	FAM205A	Q6ZU69	1335 aa		10.05	□□□□□ -0.8
PTK2-253	ENST00000523805	PDE4DIP	Q5VU43	2346 aa		10.04	□□□□□ -0.8
PTK2-253	ENST00000523805	GPR25	O00155	361 aa		10.04	□□□□□ -0.8

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