RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 TMTC2Q8N394 836 aa31.87■■■□□ 2.69
TRNP1-201ENST00000522111 WDR33Q9C0J8 1336 aaKnown RBP31.86■■■□□ 2.69
TRNP1-201ENST00000522111 VPS37CA5D8V6 355 aaPredicted RBP31.86■■■□□ 2.69
TRNP1-201ENST00000522111 DHX16O60231 1041 aaKnown RBP31.86■■■□□ 2.69
TRNP1-201ENST00000522111 CDC27P30260 824 aa31.86■■■□□ 2.69
TRNP1-201ENST00000522111 ZSCAN29Q8IWY8 852 aaPredicted RBP31.86■■■□□ 2.69
TRNP1-201ENST00000522111 ZNF654Q8IZM8 581 aa31.86■■■□□ 2.69
TRNP1-201ENST00000522111 NUP133Q8WUM0 1156 aa31.86■■■□□ 2.69
TRNP1-201ENST00000522111 GJA3Q9Y6H8 435 aa31.86■■■□□ 2.69
TRNP1-201ENST00000522111 FAM184AQ8NB25 1140 aa31.85■■■□□ 2.69
TRNP1-201ENST00000522111 SLURP2P0DP57 97 aa31.85■■■□□ 2.69
TRNP1-201ENST00000522111 EIF6P56537 245 aaKnown RBP31.85■■■□□ 2.69
TRNP1-201ENST00000522111 CHAMP1Q96JM3 812 aa31.85■■■□□ 2.69
TRNP1-201ENST00000522111 IL17RBQ9NRM6 502 aa31.85■■■□□ 2.69
TRNP1-201ENST00000522111 SERPINB13Q9UIV8 391 aa31.85■■■□□ 2.69
TRNP1-201ENST00000522111 HLA-DOAP06340 250 aa31.84■■■□□ 2.69
TRNP1-201ENST00000522111 FOSBP53539 338 aa31.84■■■□□ 2.69
TRNP1-201ENST00000522111 MYH8P13535 1937 aa31.84■■■□□ 2.69
TRNP1-201ENST00000522111 DDTLA6NHG4 134 aaPredicted RBP31.83■■■□□ 2.69
TRNP1-201ENST00000522111 FOXD4L6Q3SYB3 417 aaPredicted RBP31.83■■■□□ 2.69
TRNP1-201ENST00000522111 FOXD4L3Q6VB84 417 aaPredicted RBP31.83■■■□□ 2.69
TRNP1-201ENST00000522111 FZD9O00144 591 aa31.83■■■□□ 2.69
TRNP1-201ENST00000522111 GABPAQ06546 454 aa31.83■■■□□ 2.69
TRNP1-201ENST00000522111 CHMP4CQ96CF2 233 aa31.83■■■□□ 2.69
TRNP1-201ENST00000522111 GBP4Q96PP9 640 aa31.83■■■□□ 2.69
TRNP1-201ENST00000522111 TCP10L2B9ZVM9 353 aa31.82■■■□□ 2.68
TRNP1-201ENST00000522111 PDCP20941 246 aa31.82■■■□□ 2.68
TRNP1-201ENST00000522111 HMGN5P82970 282 aaKnown RBP31.82■■■□□ 2.68
TRNP1-201ENST00000522111 TMOD2Q9NZR1 351 aa31.82■■■□□ 2.68
TRNP1-201ENST00000522111 ZNF541Q9H0D2 1346 aa31.82■■■□□ 2.68
TRNP1-201ENST00000522111 ZSCAN22P10073 491 aaPredicted RBP31.81■■■□□ 2.68
TRNP1-201ENST00000522111 SH3BP5LQ7L8J4 393 aa31.81■■■□□ 2.68
TRNP1-201ENST00000522111 FAM217BQ9NTX9 383 aaPredicted RBP31.81■■■□□ 2.68
TRNP1-201ENST00000522111 MTMR6Q9Y217 621 aa31.81■■■□□ 2.68
TRNP1-201ENST00000522111 SIPA1L1O43166 1804 aa31.81■■■□□ 2.68
TRNP1-201ENST00000522111 FAM196BA6NMK8 535 aa31.8■■■□□ 2.68
TRNP1-201ENST00000522111 MCM4P33991 863 aa31.8■■■□□ 2.68
TRNP1-201ENST00000522111 GMPSP49915 693 aaPredicted RBP31.8■■■□□ 2.68
TRNP1-201ENST00000522111 RCSD1Q6JBY9 416 aa31.8■■■□□ 2.68
TRNP1-201ENST00000522111 CATIPQ7Z7H3 387 aa31.8■■■□□ 2.68
TRNP1-201ENST00000522111 VEZTQ9HBM0 779 aa31.8■■■□□ 2.68
TRNP1-201ENST00000522111 MYOZ2Q9NPC6 264 aa31.8■■■□□ 2.68
TRNP1-201ENST00000522111 ZNF70Q9UC06 446 aaPredicted RBP31.8■■■□□ 2.68
TRNP1-201ENST00000522111 BAG4O95429 457 aaKnown RBP31.79■■■□□ 2.68
TRNP1-201ENST00000522111 FDPSP14324 419 aaKnown RBP31.79■■■□□ 2.68
TRNP1-201ENST00000522111 RTN1Q16799 776 aa31.79■■■□□ 2.68
TRNP1-201ENST00000522111 CDC37L1Q7L3B6 337 aa31.79■■■□□ 2.68
TRNP1-201ENST00000522111 PHKBQ93100 1093 aa31.79■■■□□ 2.68
TRNP1-201ENST00000522111 DHX36Q9H2U1 1008 aaKnown RBP31.79■■■□□ 2.68
TRNP1-201ENST00000522111 LMNB1P20700 586 aa31.79■■■□□ 2.68
TRNP1-201ENST00000522111 RBM26Q5T8P6 1007 aaKnown RBP31.79■■■□□ 2.68
TRNP1-201ENST00000522111 CRACR2BQ8N4Y2 399 aaPredicted RBP31.79■■■□□ 2.68
TRNP1-201ENST00000522111 YBX3P16989 372 aaKnown RBP eCLIP31.78■■■□□ 2.68
TRNP1-201ENST00000522111 NBPF9Q3BBW0 867 aa31.78■■■□□ 2.68
TRNP1-201ENST00000522111 CMTR1Q8N1G2 835 aaKnown RBP31.78■■■□□ 2.68
TRNP1-201ENST00000522111 TAOK2Q9UL54 1235 aa31.78■■■□□ 2.68
TRNP1-201ENST00000522111 STX8Q9UNK0 236 aa31.78■■■□□ 2.68
TRNP1-201ENST00000522111 NT5C2P49902 561 aa31.77■■■□□ 2.68
TRNP1-201ENST00000522111 SPDYE2Q495Y8 402 aa31.77■■■□□ 2.68
TRNP1-201ENST00000522111 FANCBQ8NB91 859 aa31.77■■■□□ 2.68
TRNP1-201ENST00000522111 NID2Q14112 1375 aa31.77■■■□□ 2.68
TRNP1-201ENST00000522111 NPM3O75607 178 aaKnown RBP31.77■■■□□ 2.68
TRNP1-201ENST00000522111 EGFRP00533 1210 aa31.77■■■□□ 2.68
TRNP1-201ENST00000522111 RPS12P25398 132 aaKnown RBP31.77■■■□□ 2.68
TRNP1-201ENST00000522111 CPLX2Q6PUV4 134 aaKnown RBP31.77■■■□□ 2.68
TRNP1-201ENST00000522111 CCDC82Q8N4S0 544 aa31.77■■■□□ 2.68
TRNP1-201ENST00000522111 DNAJC18Q9H819 358 aa31.77■■■□□ 2.68
TRNP1-201ENST00000522111 ORC3Q9UBD5 711 aaPredicted RBP31.77■■■□□ 2.68
TRNP1-201ENST00000522111 WNT10BO00744 389 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 ENTPD3O75355 529 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 F13A1P00488 732 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 SHMT1P34896 483 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 FERMT3Q86UX7 667 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 MICALL2Q8IY33 904 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 MTMR14Q8NCE2 650 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 PI4KBQ9UBF8 816 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 SWAP70Q9UH65 585 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 KIF3AQ9Y496 699 aa31.76■■■□□ 2.68
TRNP1-201ENST00000522111 SBF1O95248 1867 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 H3BQV1 296 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 CDKL5O76039 1030 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 AKR1B1P15121 316 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 TROAPQ12815 778 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 NTRK3Q16288 839 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 IFFO2Q5TF58 517 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 NEDD1Q8NHV4 660 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 EHD4Q9H223 541 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 KAT14Q9H8E8 782 aa31.76■■■□□ 2.67
TRNP1-201ENST00000522111 DGKHQ86XP1 1220 aa31.75■■■□□ 2.67
TRNP1-201ENST00000522111 ANP32EQ9BTT0 268 aa31.75■■■□□ 2.67
TRNP1-201ENST00000522111 TCP11L1Q9NUJ3 509 aa31.75■■■□□ 2.67
TRNP1-201ENST00000522111 DICER1Q9UPY3 1922 aaKnown RBP31.75■■■□□ 2.67
TRNP1-201ENST00000522111 MYO1BO43795 1136 aa31.74■■■□□ 2.67
TRNP1-201ENST00000522111 MCTP1Q6DN14 999 aa31.74■■■□□ 2.67
TRNP1-201ENST00000522111 CEP95Q96GE4 821 aa31.74■■■□□ 2.67
TRNP1-201ENST00000522111 CSRNP1Q96S65 589 aa31.74■■■□□ 2.67
TRNP1-201ENST00000522111 RCAN1P53805 252 aa31.74■■■□□ 2.67
TRNP1-201ENST00000522111 CLEC17AQ6ZS10 378 aa31.74■■■□□ 2.67
TRNP1-201ENST00000522111 TRIM34Q9BYJ4 488 aa31.74■■■□□ 2.67
TRNP1-201ENST00000522111 CNOT7Q9UIV1 285 aaKnown RBP31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms