RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 UBE3CQ15386 1083 aa20.62■□□□□ 0.89
SQLE-205ENST00000521232 SHROOM1Q2M3G4 852 aaPredicted RBP20.62■□□□□ 0.89
SQLE-205ENST00000521232 LCORLQ8N3X6 602 aa20.62■□□□□ 0.89
SQLE-205ENST00000521232 TRIM47Q96LD4 638 aa20.62■□□□□ 0.89
SQLE-205ENST00000521232 ZBTB21Q9ULJ3 1066 aa20.62■□□□□ 0.89
SQLE-205ENST00000521232 LOC285556D6RIA3 1793 aa20.62■□□□□ 0.89
SQLE-205ENST00000521232 HOXD10P28358 340 aa20.61■□□□□ 0.89
SQLE-205ENST00000521232 SLFNL1Q499Z3 407 aa20.61■□□□□ 0.89
SQLE-205ENST00000521232 PNMA3Q9UL41 463 aa20.61■□□□□ 0.89
SQLE-205ENST00000521232 MYH7P12883 1935 aa20.61■□□□□ 0.89
SQLE-205ENST00000521232 C19orf81C9J6K1 198 aa20.6■□□□□ 0.89
SQLE-205ENST00000521232 FMNL1O95466 1100 aaPredicted RBP20.6■□□□□ 0.89
SQLE-205ENST00000521232 POLR3DP05423 398 aaPredicted RBP20.6■□□□□ 0.89
SQLE-205ENST00000521232 PABPC4Q13310 644 aaKnown RBP eCLIP20.6■□□□□ 0.894e-32■■■□□ 17.8
SQLE-205ENST00000521232 ZSCAN25Q6NSZ9 544 aa20.6■□□□□ 0.89
SQLE-205ENST00000521232 NBPF11Q86T75 865 aa20.6■□□□□ 0.89
SQLE-205ENST00000521232 SMCR8Q8TEV9 937 aaPredicted RBP20.6■□□□□ 0.89
SQLE-205ENST00000521232 SDR42E1Q8WUS8 393 aa20.6■□□□□ 0.89
SQLE-205ENST00000521232 CRBNQ96SW2 442 aa20.6■□□□□ 0.89
SQLE-205ENST00000521232 ARMT1Q9H993 441 aa20.6■□□□□ 0.89
SQLE-205ENST00000521232 DCP1AQ9NPI6 582 aaPredicted RBP20.6■□□□□ 0.89
SQLE-205ENST00000521232 MCM9Q9NXL9 1143 aa20.6■□□□□ 0.89
SQLE-205ENST00000521232 SRRDQ9UH36 339 aa20.6■□□□□ 0.89
SQLE-205ENST00000521232 DDX60LQ5H9U9 1706 aaKnown RBP20.59■□□□□ 0.89
SQLE-205ENST00000521232 USP17L10C9JJH3 530 aa20.59■□□□□ 0.89
SQLE-205ENST00000521232 GH2P01242 217 aa20.59■□□□□ 0.89
SQLE-205ENST00000521232 OSBPP22059 807 aa20.59■□□□□ 0.89
SQLE-205ENST00000521232 GABPAQ06546 454 aa20.59■□□□□ 0.89
SQLE-205ENST00000521232 MTMR2Q13614 643 aa20.59■□□□□ 0.89
SQLE-205ENST00000521232 CERKLQ49MI3 558 aaPredicted RBP20.59■□□□□ 0.89
SQLE-205ENST00000521232 SLC9C1Q4G0N8 1177 aa20.59■□□□□ 0.89
SQLE-205ENST00000521232 GPATCH3Q96I76 525 aa20.59■□□□□ 0.89
SQLE-205ENST00000521232 ZNF333Q96JL9 665 aa20.59■□□□□ 0.89
SQLE-205ENST00000521232 MGAMO43451 1857 aa20.58■□□□□ 0.89
SQLE-205ENST00000521232 NAV1Q8NEY1 1877 aa20.58■□□□□ 0.89
SQLE-205ENST00000521232 ECM2O94769 699 aaPredicted RBP20.58■□□□□ 0.89
SQLE-205ENST00000521232 MBD4O95243 580 aa20.58■□□□□ 0.89
SQLE-205ENST00000521232 CHGBP05060 677 aa20.58■□□□□ 0.89
SQLE-205ENST00000521232 HOXA7P31268 230 aaPredicted RBP20.58■□□□□ 0.89
SQLE-205ENST00000521232 SHMT1P34896 483 aa20.58■□□□□ 0.89
SQLE-205ENST00000521232 FCGRTP55899 365 aa20.58■□□□□ 0.89
SQLE-205ENST00000521232 ATP8A2Q9NTI2 1148 aa20.58■□□□□ 0.89
SQLE-205ENST00000521232 TMOD4Q9NZQ9 345 aa20.58■□□□□ 0.89
SQLE-205ENST00000521232 PDE4DIPQ5VU43 2346 aa20.58■□□□□ 0.88
SQLE-205ENST00000521232 MKI67P46013 3256 aaKnown RBP20.57■□□□□ 0.88
SQLE-205ENST00000521232 PRKAB2O43741 272 aa20.57■□□□□ 0.88
SQLE-205ENST00000521232 ASCC2Q9H1I8 757 aaPredicted RBP20.57■□□□□ 0.88
SQLE-205ENST00000521232 TAOK2Q9UL54 1235 aa20.57■□□□□ 0.88
SQLE-205ENST00000521232 GCLCP48506 637 aaPredicted RBP20.56■□□□□ 0.88
SQLE-205ENST00000521232 FAM110CQ1W6H9 321 aa20.56■□□□□ 0.88
SQLE-205ENST00000521232 ABCB5Q2M3G0 1257 aa20.56■□□□□ 0.88
SQLE-205ENST00000521232 ANKRD13CQ8N6S4 541 aa20.56■□□□□ 0.88
SQLE-205ENST00000521232 KBTBD3Q8NAB2 608 aa20.56■□□□□ 0.88
SQLE-205ENST00000521232 PUS7LQ9H0K6 701 aaKnown RBP20.56■□□□□ 0.88
SQLE-205ENST00000521232 TTC41PQ6P2S7 1318 aa20.55■□□□□ 0.88
SQLE-205ENST00000521232 DOCK3Q8IZD9 2030 aa20.55■□□□□ 0.88
SQLE-205ENST00000521232 POTEFA5A3E0 1075 aa20.55■□□□□ 0.88
SQLE-205ENST00000521232 EVX2Q03828 476 aa20.55■□□□□ 0.88
SQLE-205ENST00000521232 TSHZ3Q63HK5 1081 aa20.55■□□□□ 0.88
SQLE-205ENST00000521232 USP17L2Q6R6M4 530 aa20.55■□□□□ 0.88
SQLE-205ENST00000521232 CABP5Q9NP86 173 aa20.55■□□□□ 0.88
SQLE-205ENST00000521232 EMILIN3Q9NT22 766 aa20.55■□□□□ 0.88
SQLE-205ENST00000521232 MYPNQ86TC9 1320 aa20.54■□□□□ 0.88
SQLE-205ENST00000521232 RBBP6Q7Z6E9 1792 aaKnown RBP20.54■□□□□ 0.88
SQLE-205ENST00000521232 AAMPQ13685 434 aa20.54■□□□□ 0.88
SQLE-205ENST00000521232 RAB3GAP1Q15042 981 aa20.54■□□□□ 0.88
SQLE-205ENST00000521232 RAET1EQ8TD07 263 aa20.54■□□□□ 0.88
SQLE-205ENST00000521232 SH3TC2Q8TF17 1288 aa20.54■□□□□ 0.88
SQLE-205ENST00000521232 BAZ2AQ9UIF9 1905 aaKnown RBP20.54■□□□□ 0.88
SQLE-205ENST00000521232 CYP2D6P10635 497 aa20.53■□□□□ 0.88
SQLE-205ENST00000521232 GUCY1A2P33402 732 aa20.53■□□□□ 0.88
SQLE-205ENST00000521232 PRKCZQ05513 592 aa20.53■□□□□ 0.88
SQLE-205ENST00000521232 HDAC1Q13547 482 aaPredicted RBP20.53■□□□□ 0.88
SQLE-205ENST00000521232 C12orf42Q96LP6 360 aa20.53■□□□□ 0.88
SQLE-205ENST00000521232 P2RX7Q99572 595 aaKnown RBP20.53■□□□□ 0.88
SQLE-205ENST00000521232 TMEM106CQ9BVX2 250 aa20.53■□□□□ 0.88
SQLE-205ENST00000521232 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
SQLE-205ENST00000521232 GABRQQ9UN88 632 aa20.53■□□□□ 0.88
SQLE-205ENST00000521232 SLC4A4Q9Y6R1 1079 aa20.53■□□□□ 0.88
SQLE-205ENST00000521232 ERC2O15083 957 aa20.52■□□□□ 0.88
SQLE-205ENST00000521232 USP14P54578 494 aa20.52■□□□□ 0.88
SQLE-205ENST00000521232 IRX3P78415 501 aaPredicted RBP20.52■□□□□ 0.88
SQLE-205ENST00000521232 C12orf60Q5U649 245 aa20.52■□□□□ 0.88
SQLE-205ENST00000521232 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.88
SQLE-205ENST00000521232 GCC1Q96CN9 775 aa20.52■□□□□ 0.88
SQLE-205ENST00000521232 STRBPQ96SI9 672 aaKnown RBP20.52■□□□□ 0.88
SQLE-205ENST00000521232 KIAA1683Q9H0B3 1180 aa20.52■□□□□ 0.88
SQLE-205ENST00000521232 MORF4L1Q9UBU8 362 aa20.52■□□□□ 0.88
SQLE-205ENST00000521232 USP17L12C9JPN9 530 aa20.51■□□□□ 0.87
SQLE-205ENST00000521232 USP17L21D6R901 530 aa20.51■□□□□ 0.87
SQLE-205ENST00000521232 TNPO2O14787 897 aaKnown RBP20.51■□□□□ 0.87
SQLE-205ENST00000521232 RNF113AO15541 343 aaKnown RBP20.51■□□□□ 0.87
SQLE-205ENST00000521232 GLRX3O76003 335 aaKnown RBP20.51■□□□□ 0.87
SQLE-205ENST00000521232 ZFYP08048 801 aaPredicted RBP20.51■□□□□ 0.87
SQLE-205ENST00000521232 GRK4P32298 578 aa20.51■□□□□ 0.87
SQLE-205ENST00000521232 ACER1Q8TDN7 264 aa20.51■□□□□ 0.87
SQLE-205ENST00000521232 OTUD7AQ8TE49 926 aaPredicted RBP20.51■□□□□ 0.87
SQLE-205ENST00000521232 DYNLL2Q96FJ2 89 aa20.51■□□□□ 0.87
SQLE-205ENST00000521232 DDRGK1Q96HY6 314 aa20.51■□□□□ 0.87
SQLE-205ENST00000521232 EN2P19622 333 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms