RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 MFSD14BQ5SR56 506 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 Q6ZUG5 572 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 BRAPQ7Z569 592 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 GPR161Q8N6U8 529 aaKnown RBP13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 NAPGQ99747 312 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 IQCGQ9H095 443 aaKnown RBP13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 SUDS3Q9H7L9 328 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 PRPHP41219 470 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 CCDC93Q567U6 631 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 CCDC117Q8IWD4 279 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 ZBTB9Q96C00 473 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 ARPP21Q9UBL0 812 aaPredicted RBP13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 BAIAP2L1Q9UHR4 511 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 NOP56O00567 594 aaKnown RBP13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 ATL3Q6DD88 541 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 SPATA5Q8NB90 893 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 CCDC42Q96M95 316 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 IMPACTQ9P2X3 320 aa13.68□□□□□ -0.22
PCDHGA6-201ENST00000517434 JCADQ9P266 1359 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 GOLGA6BA6NDN3 693 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 ACTN2P35609 894 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 CRKLP46109 303 aaKnown RBP13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 BRINP3Q76B58 766 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 HACE1Q8IYU2 909 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 CCDC110Q8TBZ0 833 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 TSPOAP1O95153 1857 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 VIMP08670 466 aaKnown RBP13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 ZNF853P0CG23 659 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 HSP90AA4PQ58FG1 418 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 JRKLQ9Y4A0 524 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 ELP1O95163 1332 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 XDHP47989 1333 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 M0QZ92 97 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 LPXNO60711 386 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 PPM1FP49593 454 aaPredicted RBP13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 GTF2IP78347 998 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 USPL1Q5W0Q7 1092 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 HAUS3Q68CZ6 603 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 RTKN2Q8IZC4 609 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 CDC42BPBQ9Y5S2 1711 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 ADRA2BP18089 450 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 TIMM10P62072 90 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 VCX3BQ9H321 246 aa13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.67□□□□□ -0.22
PCDHGA6-201ENST00000517434 CCNA1P78396 465 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 RRAGBQ5VZM2 374 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 KBTBD3Q8NAB2 608 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 LMBR1Q8WVP7 490 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 SYNCQ9H7C4 482 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 USP40Q9NVE5 1235 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 MTRF1LQ9UGC7 380 aaKnown RBP13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 USP6P35125 1406 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 PABPN1LA6NDY0 278 aaKnown RBP13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 SERPINB2P05120 415 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 TSHZ3Q63HK5 1081 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 AZI2Q9H6S1 392 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 RRP15Q9Y3B9 282 aaKnown RBP13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 ERVV-1B6SEH8 477 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 RPL13P26373 211 aaKnown RBP13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 MYL5Q02045 173 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 DTHD1Q6ZMT9 781 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 RUFY4Q6ZNE9 571 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 SAP30BPQ9UHR5 308 aaKnown RBP13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 AFF2P51816 1311 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 NEURL1BA8MQ27 555 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 HPDP32754 393 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 RFC1P35251 1148 aaPredicted RBP13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 SMTNP53814 917 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 NEDD9Q14511 834 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 ZNF365Q70YC5 407 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 SPAG5Q96R06 1193 aa13.66□□□□□ -0.22
PCDHGA6-201ENST00000517434 ERBB3P21860 1342 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 AKR1B15C9JRZ8 316 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 PPFIA4O75335 1185 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 ASIC1P78348 528 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 CCDC97Q96F63 343 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 SPATA31A6Q5VVP1 1343 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 FERP16591 822 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 DNM2P50570 870 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 ZNF215Q9UL58 517 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 BICDL2A1A5D9 508 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 LIG3P49916 1009 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 CREB3L3Q68CJ9 461 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 TBC1D31Q96DN5 1066 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 FAM114A2Q9NRY5 505 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 JAG2Q9Y219 1238 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 USP19O94966 1318 aa13.65□□□□□ -0.22
PCDHGA6-201ENST00000517434 SPTLC2O15270 562 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 ARHGAP6O43182 974 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 CIB2O75838 187 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 SEC62Q99442 399 aaKnown RBP13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 DBNDD2Q9BQY9 259 aa13.64□□□□□ -0.23
PCDHGA6-201ENST00000517434 LMBRD1Q9NUN5 540 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms