RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 SMARCC1Q92922 1105 aaPredicted RBP5.18□□□□□ -1.58
RNU6-27P-201ENST00000516146 CDC6Q99741 560 aa5.18□□□□□ -1.58
RNU6-27P-201ENST00000516146 CARD10Q9BWT7 1032 aa5.18□□□□□ -1.58
RNU6-27P-201ENST00000516146 RAD18Q9NS91 495 aa5.18□□□□□ -1.58
RNU6-27P-201ENST00000516146 HOMER2Q9NSB8 354 aa5.18□□□□□ -1.58
RNU6-27P-201ENST00000516146 SYNGAP1Q96PV0 1343 aa5.18□□□□□ -1.58
RNU6-27P-201ENST00000516146 TRAV20A0A0B4J274 112 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 CHURC1-FNTBB4DL54 471 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 C11orf95C9JLR9 678 aaPredicted RBP5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 FANCGO15287 622 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 ADCY3O60266 1144 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 DNAJA2O60884 412 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 AOC2O75106 756 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 RFPL3O75679 317 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 ALBP02768 609 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 EPXP11678 715 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 NLRP12P59046 1061 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 ID3Q02535 119 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 HSP90AA2PQ14568 343 aaPredicted RBP5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 MSL1Q68DK7 614 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 SLC6A19Q695T7 634 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 C20orf204Q6ZNR8 217 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 FERMT3Q86UX7 667 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 SLFN12Q8IYM2 578 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 KCT2Q8NC54 265 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 KLHL6Q8WZ60 621 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 ACSF2Q96CM8 615 aaPredicted RBP5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 KLHDC7BQ96G42 594 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 LRP2BPQ9P2M1 347 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 MCM8Q9UJA3 840 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 HIF3AQ9Y2N7 669 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 STARD13Q9Y3M8 1113 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 CSADQ9Y600 493 aa5.17□□□□□ -1.58
RNU6-27P-201ENST00000516146 IGF1RP08069 1367 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 LOC100289279A0A1B0GTE1 492 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 ANKRD34BA5PLL1 514 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 M0R082 166 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 RGS13O14921 159 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 PLD2O14939 933 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 PARNO95453 639 aaKnown RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 CTSBP07858 339 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 MYCLP1P12525 358 aaPredicted RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 STAT3P40763 770 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 PMS1P54277 932 aaKnown RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 PABPC4Q13310 644 aaKnown RBP eCLIP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 C21orf62-AS1Q17RA5 79 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 FNDC3BQ53EP0 1204 aaKnown RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 PPM1JQ5JR12 505 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 ZBTB37Q5TC79 503 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 HID1Q8IV36 788 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 MCATQ8IVS2 390 aaKnown RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 MRPL41Q8IXM3 137 aaKnown RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 DHX37Q8IY37 1157 aaKnown RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 ZNF417Q8TAU3 575 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 ZNF507Q8TCN5 953 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 STAG1Q8WVM7 1258 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 WDR89Q96FK6 387 aaPredicted RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 CCDC136Q96JN2 1154 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 TMEM87BQ96K49 555 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 ZNF587Q96SQ5 575 aaPredicted RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 KIF2CQ99661 725 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 APBA2Q99767 749 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 WDR18Q9BV38 432 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 CAAP1Q9H8G2 361 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 CHPF2Q9P2E5 772 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 SUCOQ9UBS9 1254 aaKnown RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 PCDHGC5Q9Y5F6 944 aa5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 ARID4BQ4LE39 1312 aaPredicted RBP5.16□□□□□ -1.58
RNU6-27P-201ENST00000516146 IRS4O14654 1257 aaPredicted RBP5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 POLR2BP30876 1174 aaKnown RBP5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 GBP1P32455 592 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 CD68P34810 354 aaPredicted RBP5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 RING1Q06587 406 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 SETDB1Q15047 1291 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 ODR4Q5SWX8 454 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 HEATR6Q6AI08 1181 aaKnown RBP5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 WWC2Q6AWC2 1192 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 CDC37L1Q7L3B6 337 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 CCDC74BQ96LY2 380 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 SLC6A18Q96N87 628 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 AARSD1Q9BTE6 412 aaKnown RBP5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 DHRS4Q9BTZ2 278 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 RUSC1Q9BVN2 902 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 NCOA5Q9HCD5 579 aaKnown RBP5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 TJP2Q9UDY2 1190 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 G3BP2Q9UN86 482 aaKnown RBP5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 ATP8A1Q9Y2Q0 1164 aa5.15□□□□□ -1.59
RNU6-27P-201ENST00000516146 TRBV23-1A0A0A0MS06 115 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 ALG1L2C9J202 215 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 CLEC3AO75596 197 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 CPEP16870 476 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 PMLP29590 882 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 AKAP4Q5JQC9 854 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 EXOSC6Q5RKV6 272 aaKnown RBP5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 THNSL2Q86YJ6 484 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 SCUBE1Q8IWY4 988 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 RNF214Q8ND24 703 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 JDP2Q8WYK2 163 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 PPP1R14AQ96A00 147 aa5.14□□□□□ -1.59
RNU6-27P-201ENST00000516146 MRPL4Q9BYD3 311 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms