RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 RCAN3Q9UKA8 241 aa16.21■□□□□ 0.19
PFDN1-206ENST00000514611 DDX60LQ5H9U9 1706 aaKnown RBP16.2■□□□□ 0.18
PFDN1-206ENST00000514611 ADCY3O60266 1144 aa16.2■□□□□ 0.18
PFDN1-206ENST00000514611 UBXN2AP68543 259 aa16.2■□□□□ 0.18
PFDN1-206ENST00000514611 PABPC4Q13310 644 aaKnown RBP eCLIP16.2■□□□□ 0.18
PFDN1-206ENST00000514611 RPAP2Q8IXW5 612 aaPredicted RBP16.2■□□□□ 0.18
PFDN1-206ENST00000514611 CLASRPQ8N2M8 674 aaKnown RBP16.2■□□□□ 0.18
PFDN1-206ENST00000514611 DNAJC2Q99543 621 aaKnown RBP16.2■□□□□ 0.18
PFDN1-206ENST00000514611 RIOK1Q9BRS2 568 aaKnown RBP16.2■□□□□ 0.18
PFDN1-206ENST00000514611 RNF208Q9H0X6 261 aa16.2■□□□□ 0.18
PFDN1-206ENST00000514611 TAOK2Q9UL54 1235 aa16.2■□□□□ 0.18
PFDN1-206ENST00000514611 PEX10O60683 326 aa16.19■□□□□ 0.18
PFDN1-206ENST00000514611 HMMRO75330 724 aa16.19■□□□□ 0.18
PFDN1-206ENST00000514611 GH2P01242 217 aa16.19■□□□□ 0.18
PFDN1-206ENST00000514611 INHAP05111 366 aa16.19■□□□□ 0.18
PFDN1-206ENST00000514611 C20orf194Q5TEA3 1177 aa16.19■□□□□ 0.18
PFDN1-206ENST00000514611 CERS3Q8IU89 383 aa16.19■□□□□ 0.18
PFDN1-206ENST00000514611 EDC3Q96F86 508 aaKnown RBP16.19■□□□□ 0.18
PFDN1-206ENST00000514611 UNC93B1Q9H1C4 597 aa16.19■□□□□ 0.18
PFDN1-206ENST00000514611 TMOD4Q9NZQ9 345 aa16.19■□□□□ 0.18
PFDN1-206ENST00000514611 GOLIM4O00461 696 aa16.18■□□□□ 0.18
PFDN1-206ENST00000514611 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
PFDN1-206ENST00000514611 PDE6AP16499 860 aa16.18■□□□□ 0.18
PFDN1-206ENST00000514611 GJA8P48165 433 aa16.18■□□□□ 0.18
PFDN1-206ENST00000514611 GCLCP48506 637 aaPredicted RBP16.18■□□□□ 0.18
PFDN1-206ENST00000514611 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
PFDN1-206ENST00000514611 EVX2Q03828 476 aa16.18■□□□□ 0.18
PFDN1-206ENST00000514611 IRF5Q13568 498 aa16.18■□□□□ 0.18
PFDN1-206ENST00000514611 COA7Q96BR5 231 aa16.18■□□□□ 0.18
PFDN1-206ENST00000514611 MAGEB6P1A0A0J9YX57 407 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 USP17L10C9JJH3 530 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 GJB1P08034 283 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 TTF1Q15361 905 aaPredicted RBP16.17■□□□□ 0.18
PFDN1-206ENST00000514611 SLC9C2Q5TAH2 1124 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 PXYLP1Q8TE99 480 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.17■□□□□ 0.18
PFDN1-206ENST00000514611 EHD4Q9H223 541 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 TXNRD2Q9NNW7 524 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 GINM1Q9NU53 330 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 SERPINB13Q9UIV8 391 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 ZNF532Q9HCE3 1301 aa16.17■□□□□ 0.18
PFDN1-206ENST00000514611 NAV1Q8NEY1 1877 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 TCRBV5S4A2TA0A5A2 114 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 C19orf81C9J6K1 198 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 RAB11FIP3O75154 756 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 HOXA7P31268 230 aaPredicted RBP16.16■□□□□ 0.18
PFDN1-206ENST00000514611 PLCD1P51178 756 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 HERVK_113P62684 666 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 ZYXQ15942 572 aaKnown RBP16.16■□□□□ 0.18
PFDN1-206ENST00000514611 SLFNL1Q499Z3 407 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 TMED8Q6PL24 325 aaPredicted RBP16.16■□□□□ 0.18
PFDN1-206ENST00000514611 NKX2-3Q8TAU0 364 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 U2AF1L4Q8WU68 220 aaKnown RBP16.16■□□□□ 0.18
PFDN1-206ENST00000514611 P2RX7Q99572 595 aaKnown RBP16.16■□□□□ 0.18
PFDN1-206ENST00000514611 EMILIN3Q9NT22 766 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 MORF4L1Q9UBU8 362 aa16.16■□□□□ 0.18
PFDN1-206ENST00000514611 MYH1P12882 1939 aa16.15■□□□□ 0.18
PFDN1-206ENST00000514611 SHMT1P34896 483 aa16.15■□□□□ 0.18
PFDN1-206ENST00000514611 RAB3GAP1Q15042 981 aa16.15■□□□□ 0.18
PFDN1-206ENST00000514611 UBE2Q1Q7Z7E8 422 aa16.15■□□□□ 0.18
PFDN1-206ENST00000514611 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
PFDN1-206ENST00000514611 SDR42E1Q8WUS8 393 aa16.15■□□□□ 0.18
PFDN1-206ENST00000514611 GCC1Q96CN9 775 aa16.15■□□□□ 0.18
PFDN1-206ENST00000514611 BOLA2Q9H3K6 86 aa16.15■□□□□ 0.18
PFDN1-206ENST00000514611 CHGBP05060 677 aa16.14■□□□□ 0.17
PFDN1-206ENST00000514611 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
PFDN1-206ENST00000514611 CERKLQ49MI3 558 aaPredicted RBP16.14■□□□□ 0.17
PFDN1-206ENST00000514611 TTC6Q86TZ1 520 aa16.14■□□□□ 0.17
PFDN1-206ENST00000514611 FEZ1Q99689 392 aa16.14■□□□□ 0.17
PFDN1-206ENST00000514611 CRNKL1Q9BZJ0 848 aaKnown RBP16.14■□□□□ 0.17
PFDN1-206ENST00000514611 GJD2Q9UKL4 321 aa16.14■□□□□ 0.17
PFDN1-206ENST00000514611 GABPAQ06546 454 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 TRIM32Q13049 653 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 ABCB5Q2M3G0 1257 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 HABP4Q5JVS0 413 aaKnown RBP16.13■□□□□ 0.17
PFDN1-206ENST00000514611 USP17L2Q6R6M4 530 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 POTEEQ6S8J3 1075 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 ACER1Q8TDN7 264 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 C12orf42Q96LP6 360 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 DEFB118Q96PH6 123 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 PAGR1Q9BTK6 254 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 CHMP4BQ9H444 224 aaKnown RBP16.13■□□□□ 0.17
PFDN1-206ENST00000514611 ARMT1Q9H993 441 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 PAK6Q9NQU5 681 aaPredicted RBP16.13■□□□□ 0.17
PFDN1-206ENST00000514611 PAG1Q9NWQ8 432 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
PFDN1-206ENST00000514611 H0YGN5 161 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 SMARCA5O60264 1052 aaPredicted RBP16.12■□□□□ 0.17
PFDN1-206ENST00000514611 FARP2O94887 1054 aaPredicted RBP16.12■□□□□ 0.17
PFDN1-206ENST00000514611 SGPL1O95470 568 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 CYP2D6P10635 497 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 GUCY1A2P33402 732 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 ADD2P35612 726 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 ERVK-24P63145 666 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 GPRC5AQ8NFJ5 357 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 PORCNQ9H237 461 aa16.12■□□□□ 0.17
PFDN1-206ENST00000514611 DCP1AQ9NPI6 582 aaPredicted RBP16.12■□□□□ 0.17
PFDN1-206ENST00000514611 RBPJLQ9UBG7 517 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms