RNA–Protein interactions for RNA: ENST00000514554.5

TGFBI-213, Transcript of transforming growth factor beta induced, humanhuman

TSL 5

Gene TGFBI, Length 1,691 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBI-213ENST00000514554 KRT40Q6A162 431 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 RCSD1Q6JBY9 416 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 BRAPQ7Z569 592 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 CCDC125Q86Z20 511 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 WASF1Q92558 559 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 ANKS1AQ92625 1134 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 MRIQ9BWK5 157 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 MKNK2Q9HBH9 465 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 FOCADQ5VW36 1801 aa18.39■□□□□ 0.53
TGFBI-213ENST00000514554 ECM29Q5VYK3 1845 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 GRIPAP1Q4V328 841 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 DACT2Q5SW24 774 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 C16orf86Q6ZW13 317 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 DGKHQ86XP1 1220 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 TRIM22Q8IYM9 498 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 SUPT20HQ8NEM7 779 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 USP28Q96RU2 1077 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 IL17RBQ9NRM6 502 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 TCP11L1Q9NUJ3 509 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 SYCE3A1L190 88 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 KIF28PB7ZC32 967 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 UBE2Q2LH0YL09 131 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 KCNA3P22001 575 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 FUT2Q10981 343 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 CCDC178Q5BJE1 867 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 CCDC183Q5T5S1 534 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 LRSAM1Q6UWE0 723 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 TTLL6Q8N841 843 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 SLC44A5Q8NCS7 719 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 PGBD1Q96JS3 809 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 ZNF287Q9HBT7 754 aa18.38■□□□□ 0.53
TGFBI-213ENST00000514554 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
TGFBI-213ENST00000514554 SCN9AQ15858 1988 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 ZNF646O15015 1829 aaPredicted RBP18.37■□□□□ 0.53
TGFBI-213ENST00000514554 C21orf2O43822 256 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 DEXIO95424 95 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 RASA1P20936 1047 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 GUCY1A2P33402 732 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 SCNN1DP51172 638 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 AOC3Q16853 763 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 ZNF444Q8N0Y2 327 aaPredicted RBP18.37■□□□□ 0.53
TGFBI-213ENST00000514554 TEKT1Q969V4 418 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 RNF26Q9BY78 433 aaPredicted RBP18.37■□□□□ 0.53
TGFBI-213ENST00000514554 MYH1P12882 1939 aa18.37■□□□□ 0.53
TGFBI-213ENST00000514554 USP17L3A6NCW0 530 aa18.36■□□□□ 0.53
TGFBI-213ENST00000514554 USP17L4A6NCW7 530 aa18.36■□□□□ 0.53
TGFBI-213ENST00000514554 WDHD1O75717 1129 aaPredicted RBP18.36■□□□□ 0.53
TGFBI-213ENST00000514554 CDK8P49336 464 aa18.36■□□□□ 0.53
TGFBI-213ENST00000514554 APOBEC3HQ6NTF7 200 aaKnown RBP18.36■□□□□ 0.53
TGFBI-213ENST00000514554 USP17L1Q7RTZ2 530 aa18.36■□□□□ 0.53
TGFBI-213ENST00000514554 CMTR1Q8N1G2 835 aaKnown RBP18.36■□□□□ 0.53
TGFBI-213ENST00000514554 FTOQ9C0B1 505 aaKnown RBP eCLIP18.36■□□□□ 0.53
TGFBI-213ENST00000514554 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
TGFBI-213ENST00000514554 RTEL1Q9NZ71 1219 aa18.36■□□□□ 0.53
TGFBI-213ENST00000514554 DPEP1P16444 411 aa18.35■□□□□ 0.53
TGFBI-213ENST00000514554 CRKP46108 304 aa18.35■□□□□ 0.53
TGFBI-213ENST00000514554 HDLBPQ00341 1268 aaKnown RBP18.35■□□□□ 0.53
TGFBI-213ENST00000514554 TRIM29Q14134 588 aa18.35■□□□□ 0.53
TGFBI-213ENST00000514554 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
TGFBI-213ENST00000514554 MYSM1Q5VVJ2 828 aa18.35■□□□□ 0.53
TGFBI-213ENST00000514554 CDC42EP5Q6NZY7 148 aa18.35■□□□□ 0.53
TGFBI-213ENST00000514554 ZDHHC15Q96MV8 337 aa18.35■□□□□ 0.53
TGFBI-213ENST00000514554 GOLGA6L4A6NEF3 574 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 PRPF3O43395 683 aaKnown RBP18.34■□□□□ 0.53
TGFBI-213ENST00000514554 TSPY3P0CV98 308 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 TSPY8P0CW00 308 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 U2AF2P26368 475 aaKnown RBP eCLIP18.34■□□□□ 0.53
TGFBI-213ENST00000514554 CEBPZQ03701 1054 aaKnown RBP18.34■□□□□ 0.53
TGFBI-213ENST00000514554 TMTC3Q6ZXV5 915 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 CCDC82Q8N4S0 544 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 DDX4Q9NQI0 724 aaKnown RBP18.34■□□□□ 0.53
TGFBI-213ENST00000514554 KIF13BQ9NQT8 1826 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 LETM1O95202 739 aaPredicted RBP18.34■□□□□ 0.53
TGFBI-213ENST00000514554 PLEKHA8P1O95397 391 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 LIG1P18858 919 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 CCDC93Q567U6 631 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 RTKN2Q8IZC4 609 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 KLHL34Q8N239 644 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 MAP3K14Q99558 947 aa18.34■□□□□ 0.53
TGFBI-213ENST00000514554 ADAMTSL1Q8N6G6 1762 aa18.33■□□□□ 0.53
TGFBI-213ENST00000514554 PPIP5K2O43314 1243 aa18.33■□□□□ 0.52
TGFBI-213ENST00000514554 GABPAQ06546 454 aa18.33■□□□□ 0.52
TGFBI-213ENST00000514554 PKN1Q16512 942 aa18.33■□□□□ 0.52
TGFBI-213ENST00000514554 KIAA0825Q8IV33 1275 aa18.33■□□□□ 0.52
TGFBI-213ENST00000514554 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.52
TGFBI-213ENST00000514554 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.52
TGFBI-213ENST00000514554 PSMD1Q99460 953 aa18.33■□□□□ 0.52
TGFBI-213ENST00000514554 KAT14Q9H8E8 782 aa18.33■□□□□ 0.52
TGFBI-213ENST00000514554 POLR3EQ9NVU0 708 aa18.33■□□□□ 0.52
TGFBI-213ENST00000514554 MMP1P03956 469 aa18.32■□□□□ 0.52
TGFBI-213ENST00000514554 NASPP49321 788 aaPredicted RBP18.32■□□□□ 0.52
TGFBI-213ENST00000514554 PICALMQ13492 652 aa18.32■□□□□ 0.52
TGFBI-213ENST00000514554 LINC00301Q8NCQ3 95 aa18.32■□□□□ 0.52
TGFBI-213ENST00000514554 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.32■□□□□ 0.52
TGFBI-213ENST00000514554 YDJCA8MPS7 323 aa18.31■□□□□ 0.52
TGFBI-213ENST00000514554 YEATS4O95619 227 aa18.31■□□□□ 0.52
TGFBI-213ENST00000514554 AKAP17AQ02040 695 aaKnown RBP18.31■□□□□ 0.52
TGFBI-213ENST00000514554 SRBD1Q8N5C6 995 aaKnown RBP18.31■□□□□ 0.52
TGFBI-213ENST00000514554 PNMA1Q8ND90 353 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms