RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 PRMT2P55345 433 aa27.84■■■□□ 2.05
CLDND1-230ENST00000514537 GPATCH3Q96I76 525 aa27.84■■■□□ 2.05
CLDND1-230ENST00000514537 TRIM47Q96LD4 638 aa27.84■■■□□ 2.05
CLDND1-230ENST00000514537 DCP1AQ9NPI6 582 aaPredicted RBP27.84■■■□□ 2.05
CLDND1-230ENST00000514537 MCM9Q9NXL9 1143 aa27.84■■■□□ 2.05
CLDND1-230ENST00000514537 CHGBP05060 677 aa27.83■■■□□ 2.05
CLDND1-230ENST00000514537 ZSCAN25Q6NSZ9 544 aa27.83■■■□□ 2.05
CLDND1-230ENST00000514537 SDR42E1Q8WUS8 393 aa27.83■■■□□ 2.05
CLDND1-230ENST00000514537 PNMA3Q9UL41 463 aa27.83■■■□□ 2.05
CLDND1-230ENST00000514537 PTPRFP10586 1907 aa27.82■■■□□ 2.04
CLDND1-230ENST00000514537 MBD4O95243 580 aa27.82■■■□□ 2.04
CLDND1-230ENST00000514537 GH2P01242 217 aa27.82■■■□□ 2.04
CLDND1-230ENST00000514537 MTMR2Q13614 643 aa27.82■■■□□ 2.04
CLDND1-230ENST00000514537 SMCR8Q8TEV9 937 aaPredicted RBP27.82■■■□□ 2.04
CLDND1-230ENST00000514537 C19orf81C9J6K1 198 aa27.81■■■□□ 2.04
CLDND1-230ENST00000514537 ECM2O94769 699 aaPredicted RBP27.81■■■□□ 2.04
CLDND1-230ENST00000514537 FMNL1O95466 1100 aaPredicted RBP27.81■■■□□ 2.04
CLDND1-230ENST00000514537 HOXD10P28358 340 aa27.81■■■□□ 2.04
CLDND1-230ENST00000514537 GABPAQ06546 454 aa27.81■■■□□ 2.04
CLDND1-230ENST00000514537 PABPC4Q13310 644 aaKnown RBP eCLIP27.81■■■□□ 2.04
CLDND1-230ENST00000514537 CERKLQ49MI3 558 aaPredicted RBP27.81■■■□□ 2.04
CLDND1-230ENST00000514537 TSHZ3Q63HK5 1081 aa27.81■■■□□ 2.04
CLDND1-230ENST00000514537 SRRDQ9UH36 339 aa27.81■■■□□ 2.04
CLDND1-230ENST00000514537 MYH1P12882 1939 aa27.8■■■□□ 2.04
CLDND1-230ENST00000514537 USP17L10C9JJH3 530 aa27.8■■■□□ 2.04
CLDND1-230ENST00000514537 PRKAB2O43741 272 aa27.8■■■□□ 2.04
CLDND1-230ENST00000514537 OSBPP22059 807 aa27.8■■■□□ 2.04
CLDND1-230ENST00000514537 SHMT1P34896 483 aa27.8■■■□□ 2.04
CLDND1-230ENST00000514537 ATP8A2Q9NTI2 1148 aa27.8■■■□□ 2.04
CLDND1-230ENST00000514537 ATAD5Q96QE3 1844 aa27.79■■■□□ 2.04
CLDND1-230ENST00000514537 SLC9C1Q4G0N8 1177 aa27.79■■■□□ 2.04
CLDND1-230ENST00000514537 NBPF11Q86T75 865 aa27.79■■■□□ 2.04
CLDND1-230ENST00000514537 TMOD4Q9NZQ9 345 aa27.79■■■□□ 2.04
CLDND1-230ENST00000514537 FCGRTP55899 365 aa27.78■■■□□ 2.04
CLDND1-230ENST00000514537 EVX2Q03828 476 aa27.78■■■□□ 2.04
CLDND1-230ENST00000514537 ABCB5Q2M3G0 1257 aa27.78■■■□□ 2.04
CLDND1-230ENST00000514537 KBTBD3Q8NAB2 608 aa27.78■■■□□ 2.04
CLDND1-230ENST00000514537 ZNF333Q96JL9 665 aa27.78■■■□□ 2.04
CLDND1-230ENST00000514537 PUS7LQ9H0K6 701 aaKnown RBP27.78■■■□□ 2.04
CLDND1-230ENST00000514537 ASCC2Q9H1I8 757 aaPredicted RBP27.78■■■□□ 2.04
CLDND1-230ENST00000514537 TTC41PQ6P2S7 1318 aa27.77■■■□□ 2.04
CLDND1-230ENST00000514537 HOXA7P31268 230 aaPredicted RBP27.77■■■□□ 2.04
CLDND1-230ENST00000514537 ANKRD13CQ8N6S4 541 aa27.77■■■□□ 2.04
CLDND1-230ENST00000514537 TAOK2Q9UL54 1235 aa27.77■■■□□ 2.04
CLDND1-230ENST00000514537 CYP2D6P10635 497 aa27.76■■■□□ 2.03
CLDND1-230ENST00000514537 GCLCP48506 637 aaPredicted RBP27.76■■■□□ 2.03
CLDND1-230ENST00000514537 HDAC1Q13547 482 aaPredicted RBP27.76■■■□□ 2.03
CLDND1-230ENST00000514537 OTUD7AQ8TE49 926 aaPredicted RBP27.76■■■□□ 2.03
CLDND1-230ENST00000514537 CABP5Q9NP86 173 aa27.76■■■□□ 2.03
CLDND1-230ENST00000514537 EMILIN3Q9NT22 766 aa27.76■■■□□ 2.03
CLDND1-230ENST00000514537 ZSWIM8A7E2V4 1837 aa27.76■■■□□ 2.03
CLDND1-230ENST00000514537 AAMPQ13685 434 aa27.75■■■□□ 2.03
CLDND1-230ENST00000514537 FAM110CQ1W6H9 321 aa27.75■■■□□ 2.03
CLDND1-230ENST00000514537 USP17L2Q6R6M4 530 aa27.75■■■□□ 2.03
CLDND1-230ENST00000514537 DDX60LQ5H9U9 1706 aaKnown RBP27.75■■■□□ 2.03
CLDND1-230ENST00000514537 MYPNQ86TC9 1320 aa27.74■■■□□ 2.03
CLDND1-230ENST00000514537 LOC285556D6RIA3 1793 aa27.74■■■□□ 2.03
CLDND1-230ENST00000514537 POTEFA5A3E0 1075 aa27.74■■■□□ 2.03
CLDND1-230ENST00000514537 GUCY1A2P33402 732 aa27.74■■■□□ 2.03
CLDND1-230ENST00000514537 RAB3GAP1Q15042 981 aa27.74■■■□□ 2.03
CLDND1-230ENST00000514537 PI4K2BQ8TCG2 481 aa27.74■■■□□ 2.03
CLDND1-230ENST00000514537 SLC4A4Q9Y6R1 1079 aa27.74■■■□□ 2.03
CLDND1-230ENST00000514537 ERC2O15083 957 aa27.73■■■□□ 2.03
CLDND1-230ENST00000514537 SH3TC2Q8TF17 1288 aa27.73■■■□□ 2.03
CLDND1-230ENST00000514537 GCC1Q96CN9 775 aa27.73■■■□□ 2.03
CLDND1-230ENST00000514537 SWAP70Q9UH65 585 aa27.73■■■□□ 2.03
CLDND1-230ENST00000514537 RNF113AO15541 343 aaKnown RBP27.72■■■□□ 2.03
CLDND1-230ENST00000514537 GLRX3O76003 335 aaKnown RBP27.72■■■□□ 2.03
CLDND1-230ENST00000514537 IRX3P78415 501 aaPredicted RBP27.72■■■□□ 2.03
CLDND1-230ENST00000514537 PRKCZQ05513 592 aa27.72■■■□□ 2.03
CLDND1-230ENST00000514537 C12orf60Q5U649 245 aa27.72■■■□□ 2.03
CLDND1-230ENST00000514537 RAET1EQ8TD07 263 aa27.72■■■□□ 2.03
CLDND1-230ENST00000514537 DYNLL2Q96FJ2 89 aa27.72■■■□□ 2.03
CLDND1-230ENST00000514537 C12orf42Q96LP6 360 aa27.72■■■□□ 2.03
CLDND1-230ENST00000514537 STRBPQ96SI9 672 aaKnown RBP27.72■■■□□ 2.03
CLDND1-230ENST00000514537 P2RX7Q99572 595 aaKnown RBP27.72■■■□□ 2.03
CLDND1-230ENST00000514537 KIAA0100Q14667 2235 aaKnown RBP27.71■■■□□ 2.03
CLDND1-230ENST00000514537 TNRC18O15417 2968 aaPredicted RBP27.71■■■□□ 2.03
CLDND1-230ENST00000514537 USP17L12C9JPN9 530 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 USP17L21D6R901 530 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 ZFYP08048 801 aaPredicted RBP27.71■■■□□ 2.03
CLDND1-230ENST00000514537 ANKRD45Q5TZF3 282 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 SLC44A5Q8NCS7 719 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 NAV1Q8NEY1 1877 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 ACER1Q8TDN7 264 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 APPBP2Q92624 585 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 OSBP2Q969R2 916 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 DDRGK1Q96HY6 314 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 KIAA1683Q9H0B3 1180 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 GABRQQ9UN88 632 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 BRCA2P51587 3418 aa27.71■■■□□ 2.03
CLDND1-230ENST00000514537 SALL3Q9BXA9 1300 aa27.7■■■□□ 2.03
CLDND1-230ENST00000514537 TNPO2O14787 897 aaKnown RBP27.7■■■□□ 2.02
CLDND1-230ENST00000514537 MX1P20591 662 aa27.7■■■□□ 2.02
CLDND1-230ENST00000514537 USP14P54578 494 aa27.7■■■□□ 2.02
CLDND1-230ENST00000514537 SEPT2Q15019 361 aa27.7■■■□□ 2.02
CLDND1-230ENST00000514537 AMOTL1Q8IY63 956 aa27.7■■■□□ 2.02
CLDND1-230ENST00000514537 FEZ1Q99689 392 aa27.7■■■□□ 2.02
CLDND1-230ENST00000514537 TMEM106CQ9BVX2 250 aa27.7■■■□□ 2.02
CLDND1-230ENST00000514537 CYP2D7A0A087X1C5 515 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms