RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 ISL2Q96A47 359 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 LENG1Q96BZ8 264 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-207ENST00000513819 TMEM87BQ96K49 555 aa6.56□□□□□ -1.36
NIPBL-207ENST00000513819 SRPK1Q96SB4 655 aaKnown RBP6.56□□□□□ -1.36
NIPBL-207ENST00000513819 DPH2Q9BQC3 489 aaPredicted RBP6.56□□□□□ -1.36
NIPBL-207ENST00000513819 GLB1P16278 677 aa6.55□□□□□ -1.36
NIPBL-207ENST00000513819 POLR2BP30876 1174 aaKnown RBP6.55□□□□□ -1.36
NIPBL-207ENST00000513819 NFE2L2Q16236 605 aa6.55□□□□□ -1.36
NIPBL-207ENST00000513819 CDCP2Q5VXM1 449 aa6.55□□□□□ -1.36
NIPBL-207ENST00000513819 CDC37L1Q7L3B6 337 aa6.55□□□□□ -1.36
NIPBL-207ENST00000513819 HID1Q8IV36 788 aa6.55□□□□□ -1.36
NIPBL-207ENST00000513819 SLC9A7Q96T83 725 aa6.55□□□□□ -1.36
NIPBL-207ENST00000513819 GSX1Q9H4S2 264 aaPredicted RBP6.55□□□□□ -1.36
NIPBL-207ENST00000513819 CNNM2Q9H8M5 875 aa6.55□□□□□ -1.36
NIPBL-207ENST00000513819 SSU72Q9NP77 194 aaKnown RBP6.55□□□□□ -1.36
NIPBL-207ENST00000513819 FAM221BA6H8Z2 402 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 B2RBV5 119 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 TNFRSF10CO14798 259 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 SART1O43290 800 aaKnown RBP6.54□□□□□ -1.36
NIPBL-207ENST00000513819 APBA3O96018 575 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 RAG1P15918 1043 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 RAB6AP20340 208 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 NOS3P29474 1203 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 IREB2P48200 963 aaKnown RBP6.54□□□□□ -1.36
NIPBL-207ENST00000513819 DDR2Q16832 855 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 SLC6A19Q695T7 634 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 UNC5AQ6ZN44 842 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 MRPL41Q8IXM3 137 aaKnown RBP6.54□□□□□ -1.36
NIPBL-207ENST00000513819 C19orf47Q8N9M1 422 aaKnown RBP6.54□□□□□ -1.36
NIPBL-207ENST00000513819 WFDC12Q8WWY7 111 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 MKL1Q969V6 931 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 SCARF2Q96GP6 870 aaPredicted RBP6.54□□□□□ -1.36
NIPBL-207ENST00000513819 MRFAP1L1Q96HT8 127 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 DEPDC7Q96QD5 511 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 SNTG2Q9NY99 539 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 MAPK8IP1Q9UQF2 711 aa6.54□□□□□ -1.36
NIPBL-207ENST00000513819 LTBP3Q9NS15 1303 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 C9orf172C9J069 976 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 DDAH1O94760 285 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 YARSP54577 528 aaKnown RBP6.53□□□□□ -1.36
NIPBL-207ENST00000513819 SLBPQ14493 270 aaKnown RBP eCLIP6.53□□□□□ -1.36
NIPBL-207ENST00000513819 RASA3Q14644 834 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 FXNQ16595 210 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 PRAMEF13Q5VWM6 474 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 CDPF1Q6NVV7 123 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 C6orf15Q6UXA7 325 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-207ENST00000513819 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.53□□□□□ -1.36
NIPBL-207ENST00000513819 SMYD4Q8IYR2 804 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-207ENST00000513819 PHACTR4Q8IZ21 702 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 FAM177A1Q8N128 213 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-207ENST00000513819 TAB3Q8N5C8 712 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-207ENST00000513819 KCT2Q8NC54 265 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 XAGE3Q8WTP9 111 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 UBL7Q96S82 380 aaPredicted RBP6.53□□□□□ -1.36
NIPBL-207ENST00000513819 KIF2CQ99661 725 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 CEP41Q9BYV8 373 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 LGR6Q9HBX8 967 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 MSRB2Q9Y3D2 182 aa6.53□□□□□ -1.36
NIPBL-207ENST00000513819 GAS2O43903 313 aaKnown RBP6.52□□□□□ -1.37
NIPBL-207ENST00000513819 GJB6O95452 261 aa6.52□□□□□ -1.37
NIPBL-207ENST00000513819 USP11P51784 963 aa6.52□□□□□ -1.37
NIPBL-207ENST00000513819 NRG1Q02297 640 aaPredicted RBP6.52□□□□□ -1.37
NIPBL-207ENST00000513819 INTS3Q68E01 1043 aaKnown RBP6.52□□□□□ -1.37
NIPBL-207ENST00000513819 ZNF746Q6NUN9 644 aaPredicted RBP6.52□□□□□ -1.37
NIPBL-207ENST00000513819 Q6ZS46 218 aa6.52□□□□□ -1.37
NIPBL-207ENST00000513819 SLFN12Q8IYM2 578 aa6.52□□□□□ -1.37
NIPBL-207ENST00000513819 BAHD1Q8TBE0 780 aaPredicted RBP6.52□□□□□ -1.37
NIPBL-207ENST00000513819 NACC1Q96RE7 527 aa6.52□□□□□ -1.37
NIPBL-207ENST00000513819 PCDHB10Q9UN67 800 aa6.52□□□□□ -1.37
NIPBL-207ENST00000513819 TMA7Q9Y2S6 64 aaKnown RBP6.52□□□□□ -1.37
NIPBL-207ENST00000513819 DAGLAQ9Y4D2 1042 aa6.52□□□□□ -1.37
NIPBL-207ENST00000513819 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-207ENST00000513819 TLDC2A0PJX2 215 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 FAM181BA6NEQ2 426 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 CST3P01034 146 aaPredicted RBP6.51□□□□□ -1.37
NIPBL-207ENST00000513819 ADGRE1Q14246 886 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 MBTPS1Q14703 1052 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 SGO2Q562F6 1265 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 JAZF1Q86VZ6 243 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 FAM178BQ8IXR5 827 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 FBLIM1Q8WUP2 373 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 FAM46AQ96IP4 442 aaKnown RBP6.51□□□□□ -1.37
NIPBL-207ENST00000513819 ACSS3Q9H6R3 686 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 TBX22Q9Y458 520 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 SLC12A7Q9Y666 1083 aa6.51□□□□□ -1.37
NIPBL-207ENST00000513819 RGS13O14921 159 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 NFICP08651 508 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 CAP2P40123 477 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 MRM1Q6IN84 353 aaKnown RBP6.5□□□□□ -1.37
NIPBL-207ENST00000513819 VHLLQ6RSH7 139 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 ARMCX6Q7L4S7 300 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 MEGF10Q96KG7 1140 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 CCDC74BQ96LY2 380 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 FOXQ1Q9C009 403 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 CCDC113Q9H0I3 377 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 SEMA6CQ9H3T2 930 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 FAM86C1Q9NVL1 165 aa6.5□□□□□ -1.37
NIPBL-207ENST00000513819 CADPSQ9ULU8 1353 aa6.49□□□□□ -1.37
NIPBL-207ENST00000513819 PDPK1O15530 556 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms