RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 INTS4Q96HW7 963 aaKnown RBP10.79□□□□□ -0.68
NR1I3-230ENST00000511944 ZSCAN31Q96LW9 406 aaPredicted RBP10.79□□□□□ -0.68
NR1I3-230ENST00000511944 CRNKL1Q9BZJ0 848 aaKnown RBP10.79□□□□□ -0.68
NR1I3-230ENST00000511944 SH2B1Q9NRF2 756 aaPredicted RBP10.79□□□□□ -0.68
NR1I3-230ENST00000511944 ATP8A2Q9NTI2 1148 aa10.79□□□□□ -0.68
NR1I3-230ENST00000511944 IQSEC3Q9UPP2 1182 aaPredicted RBP10.79□□□□□ -0.68
NR1I3-230ENST00000511944 GAKO14976 1311 aa10.79□□□□□ -0.68
NR1I3-230ENST00000511944 LTBP3Q9NS15 1303 aa10.79□□□□□ -0.68
NR1I3-230ENST00000511944 ZNF213O14771 459 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 NR1I2O75469 434 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 ZBTB7AO95365 584 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 FGAP02671 866 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 PDIA4P13667 645 aaKnown RBP10.78□□□□□ -0.68
NR1I3-230ENST00000511944 CASTP20810 708 aaKnown RBP10.78□□□□□ -0.68
NR1I3-230ENST00000511944 RPS6KB1P23443 525 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 PRDX5P30044 214 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 CLK2P49760 499 aaKnown RBP10.78□□□□□ -0.68
NR1I3-230ENST00000511944 HDLBPQ00341 1268 aaKnown RBP10.78□□□□□ -0.68
NR1I3-230ENST00000511944 CHAF1AQ13111 956 aaPredicted RBP10.78□□□□□ -0.68
NR1I3-230ENST00000511944 CUL4AQ13619 759 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 BRICD5Q6PL45 260 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 ZNF384Q8TF68 577 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 JAKMIP1Q96N16 626 aaKnown RBP10.78□□□□□ -0.68
NR1I3-230ENST00000511944 NEK1Q96PY6 1258 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 NOL10Q9BSC4 688 aaKnown RBP10.78□□□□□ -0.68
NR1I3-230ENST00000511944 CNNM2Q9H8M5 875 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 CWC22Q9HCG8 908 aaKnown RBP10.78□□□□□ -0.68
NR1I3-230ENST00000511944 ANAPC4Q9UJX5 808 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 CCDC88AQ3V6T2 1871 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 MROH7-TTC4A0A0A0MT08 1334 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 MYO3BQ8WXR4 1341 aa10.78□□□□□ -0.68
NR1I3-230ENST00000511944 BRCA1P38398 1863 aaKnown RBP10.77□□□□□ -0.69
NR1I3-230ENST00000511944 GSG1L2A8MUP6 293 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 CHGBP05060 677 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 DPEP1P16444 411 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 QPCTQ16769 361 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 CSPP1Q1MSJ5 1256 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 DALRD3Q5D0E6 543 aaKnown RBP10.77□□□□□ -0.69
NR1I3-230ENST00000511944 MFSD14BQ5SR56 506 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 IFNL3Q8IZI9 196 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 AGXT2Q9BYV1 514 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 NAPBQ9H115 298 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 RNF41Q9H4P4 317 aaPredicted RBP10.77□□□□□ -0.69
NR1I3-230ENST00000511944 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 LIMCH1Q9UPQ0 1083 aa10.77□□□□□ -0.69
NR1I3-230ENST00000511944 GPR75-ASB3A0A0A6YYF3 556 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 E7EWF7 191 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 GJA5P36382 358 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 KCNC4Q03721 635 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 TRDNQ13061 729 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 ADCK5Q3MIX3 580 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 SBK1Q52WX2 424 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 HHIPL2Q6UWX4 724 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 DHX32Q7L7V1 743 aaKnown RBP10.76□□□□□ -0.69
NR1I3-230ENST00000511944 LCORLQ8N3X6 602 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 STAG1Q8WVM7 1258 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 ARMT1Q9H993 441 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 SPON1Q9HCB6 807 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 ARPP21Q9UBL0 812 aaPredicted RBP10.76□□□□□ -0.69
NR1I3-230ENST00000511944 SLC4A4Q9Y6R1 1079 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 ROBO3Q96MS0 1386 aa10.76□□□□□ -0.69
NR1I3-230ENST00000511944 MYO5AQ9Y4I1 1855 aaKnown RBP10.75□□□□□ -0.69
NR1I3-230ENST00000511944 A0A0G2JLW4 131 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 USP17L3A6NCW0 530 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 USP17L4A6NCW7 530 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 C21orf2O43822 256 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 ECE2O60344 883 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 CD2BP2O95400 341 aaKnown RBP10.75□□□□□ -0.69
NR1I3-230ENST00000511944 HSP90AA1P07900 732 aaKnown RBP10.75□□□□□ -0.69
NR1I3-230ENST00000511944 DDIT3P35638 169 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 EVCP57679 992 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 SLFNL1Q499Z3 407 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 TTLL5Q6EMB2 1281 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 USP17L1Q7RTZ2 530 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 RALYLQ86SE5 291 aaKnown RBP10.75□□□□□ -0.69
NR1I3-230ENST00000511944 ADGRA1Q86SQ6 560 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 NCOA7Q8NI08 942 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 TMX3Q96JJ7 454 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
NR1I3-230ENST00000511944 UPF3BQ9BZI7 483 aaKnown RBP10.75□□□□□ -0.69
NR1I3-230ENST00000511944 KRT23Q9C075 422 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 EPB41L4AQ9HCS5 686 aaPredicted RBP10.75□□□□□ -0.69
NR1I3-230ENST00000511944 GOPCQ9HD26 462 aa10.75□□□□□ -0.69
NR1I3-230ENST00000511944 APPP05067 770 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 FGRP09769 529 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 MCM5P33992 734 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 TDO2P48775 406 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 RCAN1P53805 252 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 AK2P54819 239 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 GTF2IP78347 998 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 EXOSC10Q01780 885 aaKnown RBP10.74□□□□□ -0.69
NR1I3-230ENST00000511944 SLC51AQ86UW1 340 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 AMOTL1Q8IY63 956 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 FAM160A2Q8N612 972 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-230ENST00000511944 MIGA1Q8NAN2 632 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 GPR101Q96P66 508 aaPredicted RBP10.74□□□□□ -0.69
NR1I3-230ENST00000511944 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
NR1I3-230ENST00000511944 PSME4Q14997 1843 aa10.74□□□□□ -0.69
NR1I3-230ENST00000511944 ZNF646O15015 1829 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms