RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 CHRDL2Q6WN34 429 aa17.78■□□□□ 0.44
SEC24D-208ENST00000506622 METTL16Q86W50 562 aaKnown RBP17.78■□□□□ 0.44
SEC24D-208ENST00000506622 PIH1D3Q9NQM4 214 aaKnown RBP17.78■□□□□ 0.44
SEC24D-208ENST00000506622 SAP30BPQ9UHR5 308 aaKnown RBP17.78■□□□□ 0.44
SEC24D-208ENST00000506622 SIPA1L1O43166 1804 aa17.78■□□□□ 0.44
SEC24D-208ENST00000506622 MYH1P12882 1939 aa17.78■□□□□ 0.44
SEC24D-208ENST00000506622 USP17L10C9JJH3 530 aa17.77■□□□□ 0.44
SEC24D-208ENST00000506622 IDH1O75874 414 aaKnown RBP17.77■□□□□ 0.44
SEC24D-208ENST00000506622 EAF2Q96CJ1 260 aaPredicted RBP17.77■□□□□ 0.44
SEC24D-208ENST00000506622 PAK6Q9NQU5 681 aaPredicted RBP17.77■□□□□ 0.44
SEC24D-208ENST00000506622 TLR7Q9NYK1 1049 aaKnown RBP17.77■□□□□ 0.44
SEC24D-208ENST00000506622 GDF11O95390 407 aa17.76■□□□□ 0.43
SEC24D-208ENST00000506622 RLBP1P12271 317 aa17.76■□□□□ 0.43
SEC24D-208ENST00000506622 HOXA7P31268 230 aaPredicted RBP17.76■□□□□ 0.43
SEC24D-208ENST00000506622 DYNLL1P63167 89 aaKnown RBP17.76■□□□□ 0.43
SEC24D-208ENST00000506622 CERS3Q8IU89 383 aa17.76■□□□□ 0.43
SEC24D-208ENST00000506622 DNAJC18Q9H819 358 aa17.76■□□□□ 0.43
SEC24D-208ENST00000506622 MORF4L1Q9UBU8 362 aa17.76■□□□□ 0.43
SEC24D-208ENST00000506622 HMGCRP04035 888 aa17.75■□□□□ 0.43
SEC24D-208ENST00000506622 USP5P45974 858 aa17.75■□□□□ 0.43
SEC24D-208ENST00000506622 JAG1P78504 1218 aa17.75■□□□□ 0.43
SEC24D-208ENST00000506622 ERC1Q8IUD2 1116 aa17.75■□□□□ 0.43
SEC24D-208ENST00000506622 P2RX7Q99572 595 aaKnown RBP17.75■□□□□ 0.43
SEC24D-208ENST00000506622 GJD2Q9UKL4 321 aa17.75■□□□□ 0.43
SEC24D-208ENST00000506622 ZBTB21Q9ULJ3 1066 aa17.75■□□□□ 0.43
SEC24D-208ENST00000506622 LAMA3Q16787 3333 aa17.74■□□□□ 0.43
SEC24D-208ENST00000506622 EVI5O60447 810 aa17.74■□□□□ 0.43
SEC24D-208ENST00000506622 MAP3K12Q12852 859 aa17.74■□□□□ 0.43
SEC24D-208ENST00000506622 CEP85Q6P2H3 762 aa17.74■□□□□ 0.43
SEC24D-208ENST00000506622 MAGEB6Q8N7X4 407 aa17.74■□□□□ 0.43
SEC24D-208ENST00000506622 MIGA1Q8NAN2 632 aa17.74■□□□□ 0.43
SEC24D-208ENST00000506622 GPRC5AQ8NFJ5 357 aa17.74■□□□□ 0.43
SEC24D-208ENST00000506622 CRISPLD2Q9H0B8 497 aa17.74■□□□□ 0.43
SEC24D-208ENST00000506622 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.74■□□□□ 0.43
SEC24D-208ENST00000506622 HERVK_113P62684 666 aa17.73■□□□□ 0.43
SEC24D-208ENST00000506622 TMED8Q6PL24 325 aaPredicted RBP17.73■□□□□ 0.43
SEC24D-208ENST00000506622 AACSQ86V21 672 aa17.73■□□□□ 0.43
SEC24D-208ENST00000506622 CCAR1Q8IX12 1150 aaKnown RBP17.73■□□□□ 0.43
SEC24D-208ENST00000506622 HMX1Q9NP08 348 aaPredicted RBP17.73■□□□□ 0.43
SEC24D-208ENST00000506622 RBM27Q9P2N5 1060 aaKnown RBP17.73■□□□□ 0.43
SEC24D-208ENST00000506622 EXOC6BQ9Y2D4 811 aa17.73■□□□□ 0.43
SEC24D-208ENST00000506622 SHROOM1Q2M3G4 852 aaPredicted RBP17.72■□□□□ 0.43
SEC24D-208ENST00000506622 HSP90AB4PQ58FF6 505 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 USP17L2Q6R6M4 530 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 NECAB2Q7Z6G3 386 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 MIER1Q8N108 512 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 PAWRQ96IZ0 340 aaKnown RBP17.72■□□□□ 0.43
SEC24D-208ENST00000506622 SERPINB13Q9UIV8 391 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 NDUFB9Q9Y6M9 179 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 RPTORQ8N122 1335 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 GH2P01242 217 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 CYP2B6P20813 491 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 TTC6Q86TZ1 520 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 ANKLE1Q8NAG6 615 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 GTF3C2Q8WUA4 911 aaPredicted RBP17.72■□□□□ 0.43
SEC24D-208ENST00000506622 NUDT12Q9BQG2 462 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
SEC24D-208ENST00000506622 PLXNB2O15031 1838 aa17.71■□□□□ 0.43
SEC24D-208ENST00000506622 MAPK4P31152 587 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 PDE3AQ14432 1141 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 TATDN1Q6P1N9 297 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 PANK1Q8TE04 598 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 SOCS4Q8WXH5 440 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 FEZ1Q99689 392 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 EHD4Q9H223 541 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 TXNRD2Q9NNW7 524 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 EMILIN3Q9NT22 766 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 RBPJLQ9UBG7 517 aa17.71■□□□□ 0.42
SEC24D-208ENST00000506622 PEX10O60683 326 aa17.7■□□□□ 0.42
SEC24D-208ENST00000506622 MS4A1P11836 297 aa17.7■□□□□ 0.42
SEC24D-208ENST00000506622 ERVK-9P63128 1117 aa17.7■□□□□ 0.42
SEC24D-208ENST00000506622 ERVK-24P63145 666 aa17.7■□□□□ 0.42
SEC24D-208ENST00000506622 TRIM32Q13049 653 aa17.7■□□□□ 0.42
SEC24D-208ENST00000506622 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
SEC24D-208ENST00000506622 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
SEC24D-208ENST00000506622 CERKLQ49MI3 558 aaPredicted RBP17.7■□□□□ 0.42
SEC24D-208ENST00000506622 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
SEC24D-208ENST00000506622 CWC22Q9HCG8 908 aaKnown RBP17.7■□□□□ 0.42
SEC24D-208ENST00000506622 DNAH12Q6ZR08 3092 aa17.7■□□□□ 0.42
SEC24D-208ENST00000506622 XRCC5P13010 732 aaKnown RBP17.69■□□□□ 0.42
SEC24D-208ENST00000506622 USP14P54578 494 aa17.69■□□□□ 0.42
SEC24D-208ENST00000506622 ZYXQ15942 572 aaKnown RBP17.69■□□□□ 0.42
SEC24D-208ENST00000506622 Q3C1V9 767 aa17.69■□□□□ 0.42
SEC24D-208ENST00000506622 TRMT44Q8IYL2 757 aaKnown RBP17.69■□□□□ 0.42
SEC24D-208ENST00000506622 RHPN1Q8TCX5 695 aa17.69■□□□□ 0.42
SEC24D-208ENST00000506622 TRIB2Q92519 343 aa17.69■□□□□ 0.42
SEC24D-208ENST00000506622 IL1RAPL2Q9NP60 686 aa17.69■□□□□ 0.42
SEC24D-208ENST00000506622 CABP5Q9NP86 173 aa17.69■□□□□ 0.42
SEC24D-208ENST00000506622 MAGEB6P1A0A0J9YX57 407 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L15C9J2P7 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L13C9JLJ4 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L11C9JVI0 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L18D6R9N7 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L22D6RA61 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L17D6RBQ6 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L19D6RCP7 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L20D6RJB6 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 USP17L24Q0WX57 530 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 ABCB5Q2M3G0 1257 aa17.68■□□□□ 0.42
SEC24D-208ENST00000506622 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 235.2 ms