RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 METTL16Q86W50 562 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 ANKLE1Q8NAG6 615 aa13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 GPRC5AQ8NFJ5 357 aa13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 MORF4L1Q9UBU8 362 aa13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-219ENST00000505207 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 ABCB7O75027 752 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 CYP7A1P22680 504 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 ZAP70P43403 619 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 USP5P45974 858 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 ERC1Q8IUD2 1116 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 ITPRIPQ8IWB1 547 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 SOCS4Q8WXH5 440 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 NUDT12Q9BQG2 462 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 CRISPLD2Q9H0B8 497 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 PALD1Q9ULE6 856 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 TNNQ9UQP3 1299 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 MGAMO43451 1857 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 FLT1P17948 1338 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 RPTORQ8N122 1335 aa13.56□□□□□ -0.24
UBE2D3-219ENST00000505207 A0A1W2PPC1 479 aa13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 IDH1O75874 414 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 MAPK4P31152 587 aa13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 MAP3K12Q12852 859 aa13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 RRP1BQ14684 758 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 HSP90AB4PQ58FF6 505 aa13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 USP17L2Q6R6M4 530 aa13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 P2RX7Q99572 595 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 CWC22Q9HCG8 908 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 GJD2Q9UKL4 321 aa13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 TRIOBPQ9H2D6 2365 aa13.55□□□□□ -0.24
UBE2D3-219ENST00000505207 BRCA2P51587 3418 aa13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 GLRX3O76003 335 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 MS4A1P11836 297 aa13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 XRCC5P13010 732 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 HERVK_113P62684 666 aa13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 PAWRQ96IZ0 340 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 NBPF3Q9H094 633 aa13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 SAP30BPQ9UHR5 308 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 ZBTB21Q9ULJ3 1066 aa13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 PHIPQ8WWQ0 1821 aa13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 PTPRFP10586 1907 aa13.54□□□□□ -0.24
UBE2D3-219ENST00000505207 GDF11O95390 407 aa13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 USP14P54578 494 aa13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 CCNA1P78396 465 aa13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 HNRNPUQ00839 825 aaKnown RBP eCLIP13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 FEZ1Q99689 392 aa13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 CABP5Q9NP86 173 aa13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 PIH1D3Q9NQM4 214 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-219ENST00000505207 USP17L15C9J2P7 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 USP17L13C9JLJ4 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 USP17L11C9JVI0 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 USP17L18D6R9N7 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 USP17L22D6RA61 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 USP17L17D6RBQ6 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 USP17L19D6RCP7 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 USP17L20D6RJB6 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 CYP2B6P20813 491 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 USP17L24Q0WX57 530 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 ADGRA1Q86SQ6 560 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 EAF2Q96CJ1 260 aaPredicted RBP13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 EHD4Q9H223 541 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 C1orf115Q9H7X2 142 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 SERPINB13Q9UIV8 391 aa13.52□□□□□ -0.25
UBE2D3-219ENST00000505207 GH2P01242 217 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 ZKSCAN1P17029 563 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 RGS2P41220 211 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 ERVK-9P63128 1117 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 ERVK-24P63145 666 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 DYNLL1P63167 89 aaKnown RBP13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 CERKLQ49MI3 558 aaPredicted RBP13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 TATDN1Q6P1N9 297 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 PLEKHH3Q7Z736 793 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 C11orf49Q9H6J7 331 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 DNAJC18Q9H819 358 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 RBPJLQ9UBG7 517 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 RABGAP1Q9Y3P9 1069 aa13.51□□□□□ -0.25
UBE2D3-219ENST00000505207 POLR3DP05423 398 aaPredicted RBP13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 ABCB5Q2M3G0 1257 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 AACSQ86V21 672 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 MIGA1Q8NAN2 632 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 C12orf42Q96LP6 360 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 PAGR1Q9BTK6 254 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 PRO3102Q9H379 93 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 OGDHLQ9ULD0 1010 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 DOCK3Q8IZD9 2030 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 LOC285556D6RIA3 1793 aa13.5□□□□□ -0.25
UBE2D3-219ENST00000505207 HMMRO75330 724 aa13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-219ENST00000505207 JAG1P78504 1218 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms