RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 BACH1O14867 736 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 KRT9P35527 623 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 ZAP70P43403 619 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 CYP27A1Q02318 531 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 CT47A1Q5JQC4 288 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 BRAPQ7Z569 592 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 NCOA7Q8NI08 942 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 OXER1Q8TDS5 423 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 SMCR8Q8TEV9 937 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 RRP36Q96EU6 259 aaKnown RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 EHD2Q9NZN4 543 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 PLEKHG1Q9ULL1 1385 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 SYF2O95926 243 aaKnown RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 TUBB4AP04350 444 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 ATP1A1P05023 1023 aaKnown RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 ERVK-24P63145 666 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 GNGT1P63211 74 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 SND1Q7KZF4 910 aaKnown RBP eCLIP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 NUTM2AQ8IVF1 878 aaPredicted RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 KRI1Q8N9T8 703 aaKnown RBP8.63□□□□□ -1.03
NEDD9-208ENST00000504387 NCAPGQ9BPX3 1015 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 MTMR7Q9Y216 660 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 FAM169AQ9Y6X4 670 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 PALLDQ8WX93 1383 aa8.63□□□□□ -1.03
NEDD9-208ENST00000504387 ADGRL3Q9HAR2 1447 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 GOLGA6CA6NDK9 693 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 EBAG9O00559 213 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 PRDM1O75626 825 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 GOLGA6DP0CG33 693 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 ATF3P18847 181 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 TBX2Q13207 712 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-208ENST00000504387 PDCLQ13371 301 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 ZMYM1Q5SVZ6 1142 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 ATL3Q6DD88 541 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 DIS3L2Q8IYB7 885 aaKnown RBP8.62□□□□□ -1.03
NEDD9-208ENST00000504387 SYNE4Q8N205 404 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 FAM71BQ8TC56 605 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 HDAC7Q8WUI4 952 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 CSRNP2Q9H175 543 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 GOLGA6AQ9NYA3 693 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 IQSEC3Q9UPP2 1182 aaPredicted RBP8.62□□□□□ -1.03
NEDD9-208ENST00000504387 SETD1AO15047 1707 aaKnown RBP8.62□□□□□ -1.03
NEDD9-208ENST00000504387 XRN1Q8IZH2 1706 aaKnown RBP8.62□□□□□ -1.03
NEDD9-208ENST00000504387 BAZ2BQ9UIF8 2168 aaKnown RBP8.62□□□□□ -1.03
NEDD9-208ENST00000504387 SNAP23O00161 211 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 PPFIA4O75335 1185 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 KCNJ6P48051 423 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 PDIA6Q15084 440 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 PTPAQ15257 358 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 PTPROQ16827 1216 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 IFNL2Q8IZJ0 200 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 ANKRD13CQ8N6S4 541 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 AIDAQ96BJ3 306 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 SLC52A2Q9HAB3 445 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 CD248Q9HCU0 757 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 CNNM1Q9NRU3 951 aa8.62□□□□□ -1.03
NEDD9-208ENST00000504387 GPAA1O43292 621 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 GYPCP04921 128 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 MAP2K2P36507 400 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 EVA1CP58658 441 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 ACTN3Q08043 901 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 NR1I3Q14994 352 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 TMEM67Q5HYA8 995 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 CCDC122Q5T0U0 273 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 RESP18Q5W5W9 173 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 KIAA1328Q86T90 577 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 ARHGEF25Q86VW2 580 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 ANKRD20A12PQ8NF67 263 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 DSCC1Q9BVC3 393 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 PATL2C9JE40 543 aaKnown RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 IFIT3O14879 490 aaKnown RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 ZBTB43O43298 467 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 RANBP6O60518 1105 aaKnown RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 HNRNPH1P31943 449 aaKnown RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 RFX5P48382 616 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 ZNF174Q15697 407 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 SLC4A8Q2Y0W8 1093 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 FILIP1LQ4L180 1135 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 RRAGBQ5VZM2 374 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 CPLX2Q6PUV4 134 aaKnown RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 CEP57Q86XR8 500 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 TBC1D10CQ8IV04 446 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 PROCA1Q8NCQ7 364 aaPredicted RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 BANK1Q8NDB2 785 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 ACBD3Q9H3P7 528 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 CXorf56Q9H5V9 222 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 PSD3Q9NYI0 1048 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 VPS54Q9P1Q0 977 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 HOXB7P09629 217 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 ENOX2Q16206 610 aaKnown RBP8.61□□□□□ -1.03
NEDD9-208ENST00000504387 METTL24Q5JXM2 366 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 RASSF8Q8NHQ8 419 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 FAM76AQ8TAV0 307 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 NBPF3Q9H094 633 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 COPRSQ9NQ92 184 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 BABAM1Q9NWV8 329 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 HPSEQ9Y251 543 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
NEDD9-208ENST00000504387 NRXN3Q9Y4C0 1643 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms