RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SMARCA1P28370 1054 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 MYL5Q02045 173 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 ST3GAL1Q11201 340 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 DIS3L2Q8IYB7 885 aaKnown RBP8.45□□□□□ -1.06
PDGFC-203ENST00000502773 SEC63Q9UGP8 760 aaKnown RBP8.45□□□□□ -1.06
PDGFC-203ENST00000502773 KCNH3Q9ULD8 1083 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 STK24Q9Y6E0 443 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-203ENST00000502773 PHLPP1O60346 1717 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 SCARF1Q14162 830 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 SAMD1Q6SPF0 538 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-203ENST00000502773 TXLNBQ8N3L3 684 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 RASSF8Q8NHQ8 419 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 TSPYL1Q9H0U9 437 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 GGA1Q9UJY5 639 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 ANKRD36CQ5JPF3 1778 aa8.45□□□□□ -1.06
PDGFC-203ENST00000502773 KCNJ6P48051 423 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 GRIPAP1Q4V328 841 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 AXDND1Q5T1B0 1012 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-203ENST00000502773 FMR1NBQ8N0W7 255 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-203ENST00000502773 IQUBQ8NA54 791 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 PGBD1Q96JS3 809 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 SEC31BQ9NQW1 1179 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 CTDNEP1O95476 244 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 FGFR1OPO95684 399 aaKnown RBP8.44□□□□□ -1.06
PDGFC-203ENST00000502773 ALDH1B1P30837 517 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 IQCDQ96DY2 449 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 CALCOCO1Q9P1Z2 691 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 TNKSO95271 1327 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 FAM237AA0A1B0GTK4 181 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 CCDC194A0A1B0GVG4 234 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 ERCC5P28715 1186 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-203ENST00000502773 ITPK1Q13572 414 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 ARL6IP4Q66PJ3 421 aaKnown RBP8.44□□□□□ -1.06
PDGFC-203ENST00000502773 SLC4A9Q96Q91 983 aa8.44□□□□□ -1.06
PDGFC-203ENST00000502773 ZBTB12Q9Y330 459 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-203ENST00000502773 ADD1P35611 737 aaKnown RBP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 ANTXR2P58335 489 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 FCHSD1Q86WN1 690 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 TBC1D10CQ8IV04 446 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 CCDC94Q9BW85 323 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 CUEDC2Q9H467 287 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 HPS5Q9UPZ3 1129 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 SRPRBQ9Y5M8 271 aaKnown RBP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 TJP1Q07157 1748 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 TSPY3P0CV98 308 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 TSPY8P0CW00 308 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 PLCD1P51178 756 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 CTDSPL2Q05D32 466 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 RESP18Q5W5W9 173 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 MPNDQ8N594 471 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 SRRTQ9BXP5 876 aaKnown RBP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 TMX1Q9H3N1 280 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 C6orf50Q9HD87 102 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 TCP11L1Q9NUJ3 509 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 GLI3P10071 1580 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 DUOX1Q9NRD9 1551 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 ZNF831Q5JPB2 1677 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 HLA-DOAP06340 250 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 PFKFB1P16118 471 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 PPP4CP60510 307 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 TUBB2AQ13885 445 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 PTPN14Q15678 1187 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 NOM1Q5C9Z4 860 aaKnown RBP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 LCORLQ8N3X6 602 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 MIGA1Q8NAN2 632 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 SPC24Q8NBT2 197 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 ENGASEQ8NFI3 743 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 KIF18AQ8NI77 898 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 FAM84BQ96KN1 310 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 TUBB2BQ9BVA1 445 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 SPTLC3Q9NUV7 552 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 MYCNP04198 464 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 SYCP1Q15431 976 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 FAM173BQ6P4H8 233 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 KRBA2Q6ZNG9 492 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 CCDC186Q7Z3E2 898 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 LUZP1Q86V48 1076 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 NOC3LQ8WTT2 800 aaKnown RBP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 ZNF622Q969S3 477 aaKnown RBP eCLIP8.43□□□□□ -1.06
PDGFC-203ENST00000502773 MCM9Q9NXL9 1143 aa8.43□□□□□ -1.06
PDGFC-203ENST00000502773 MYH3P11055 1940 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 FGRP09769 529 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 FDPSP14324 419 aaKnown RBP8.42□□□□□ -1.06
PDGFC-203ENST00000502773 PTPREP23469 700 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 CYB5R4Q7L1T6 521 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 PPFIBP1Q86W92 1011 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 PLA2G4DQ86XP0 818 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 FAM114A1Q8IWE2 563 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 CRAMP1Q96RY5 1269 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 AATFQ9NY61 560 aaKnown RBP eCLIP8.42□□□□□ -1.06
PDGFC-203ENST00000502773 ITGB4P16144 1822 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 A0A1B0GVL5 298 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 TOP1P11387 765 aaKnown RBP8.42□□□□□ -1.06
PDGFC-203ENST00000502773 TRIM14Q14142 442 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 TEX35Q5T0J7 233 aa8.42□□□□□ -1.06
PDGFC-203ENST00000502773 KRT25Q7Z3Z0 450 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms