RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 C16orf86Q6ZW13 317 aa18.57■□□□□ 0.56
CPNE1-228ENST00000498814 PCNTO95613 3336 aa18.57■□□□□ 0.56
CPNE1-228ENST00000498814 FGAP02671 866 aa18.56■□□□□ 0.56
CPNE1-228ENST00000498814 ASNSP08243 561 aa18.56■□□□□ 0.56
CPNE1-228ENST00000498814 CDK8P49336 464 aa18.56■□□□□ 0.56
CPNE1-228ENST00000498814 CERKLQ49MI3 558 aaPredicted RBP18.56■□□□□ 0.56
CPNE1-228ENST00000498814 SLC44A5Q8NCS7 719 aa18.56■□□□□ 0.56
CPNE1-228ENST00000498814 IL25Q9H293 177 aa18.56■□□□□ 0.56
CPNE1-228ENST00000498814 PTPRFP10586 1907 aa18.56■□□□□ 0.56
CPNE1-228ENST00000498814 MANSC4A6NHS7 340 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-228ENST00000498814 IRF6O14896 467 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 SGSM2O43147 1006 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 INHBEP58166 350 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 JAG1P78504 1218 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 MAP2K1Q02750 393 aaPredicted RBP18.55■□□□□ 0.56
CPNE1-228ENST00000498814 PPARAQ07869 468 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 DSCC1Q9BVC3 393 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 TBC1D2Q9BYX2 928 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 ZBTB21Q9ULJ3 1066 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 ZHX2Q9Y6X8 837 aa18.55■□□□□ 0.56
CPNE1-228ENST00000498814 LAMA4Q16363 1823 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 USP17L5A8MUK1 530 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 GDF11O95390 407 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 TM4SF4P48230 202 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 GTF2A2P52657 109 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 SREBF2Q12772 1141 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 ABCB5Q2M3G0 1257 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 MS4A4AQ96JQ5 239 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 CCDC17Q96LX7 622 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 ANAPC4Q9UJX5 808 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 KCNH4Q9UQ05 1017 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
CPNE1-228ENST00000498814 TESPA1A2RU30 521 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-228ENST00000498814 CXCL11O14625 94 aa18.53■□□□□ 0.56
CPNE1-228ENST00000498814 GH2P01242 217 aa18.53■□□□□ 0.56
CPNE1-228ENST00000498814 SLC3A2P08195 630 aaKnown RBP18.53■□□□□ 0.56
CPNE1-228ENST00000498814 SNAPC2Q13487 334 aa18.53■□□□□ 0.56
CPNE1-228ENST00000498814 SHROOM1Q2M3G4 852 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-228ENST00000498814 ZNF287Q9HBT7 754 aa18.53■□□□□ 0.56
CPNE1-228ENST00000498814 CABP5Q9NP86 173 aa18.53■□□□□ 0.56
CPNE1-228ENST00000498814 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.53■□□□□ 0.56
CPNE1-228ENST00000498814 CDC45O75419 566 aa18.52■□□□□ 0.56
CPNE1-228ENST00000498814 ESYT1Q9BSJ8 1104 aa18.52■□□□□ 0.56
CPNE1-228ENST00000498814 WDR18Q9BV38 432 aa18.52■□□□□ 0.56
CPNE1-228ENST00000498814 AS3MTQ9HBK9 375 aa18.52■□□□□ 0.56
CPNE1-228ENST00000498814 WBP1LQ9NX94 342 aa18.52■□□□□ 0.56
CPNE1-228ENST00000498814 GREB1LQ9C091 1923 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-228ENST00000498814 CETPP11597 493 aa18.51■□□□□ 0.55
CPNE1-228ENST00000498814 PDE4BQ07343 736 aa18.51■□□□□ 0.55
CPNE1-228ENST00000498814 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
CPNE1-228ENST00000498814 CCDC84Q86UT8 332 aaPredicted RBP18.51■□□□□ 0.55
CPNE1-228ENST00000498814 ZNF280CQ8ND82 737 aa18.51■□□□□ 0.55
CPNE1-228ENST00000498814 MKNK2Q9HBH9 465 aa18.51■□□□□ 0.55
CPNE1-228ENST00000498814 CTNNA3Q9UI47 895 aa18.51■□□□□ 0.55
CPNE1-228ENST00000498814 CCL15-CCL14A0A0B4J2E2 113 aa18.5■□□□□ 0.55
CPNE1-228ENST00000498814 RASA1P20936 1047 aa18.5■□□□□ 0.55
CPNE1-228ENST00000498814 GUCY1A2P33402 732 aa18.5■□□□□ 0.55
CPNE1-228ENST00000498814 CTDSPL2Q05D32 466 aa18.5■□□□□ 0.55
CPNE1-228ENST00000498814 CCL15Q16663 113 aa18.5■□□□□ 0.55
CPNE1-228ENST00000498814 TMEM179Q6ZVK1 233 aa18.5■□□□□ 0.55
CPNE1-228ENST00000498814 STK11IPQ8N1F8 1099 aa18.5■□□□□ 0.55
CPNE1-228ENST00000498814 BRI3BPQ8WY22 251 aa18.5■□□□□ 0.55
CPNE1-228ENST00000498814 A0A0G2JLL6 359 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-228ENST00000498814 TRIM75PA6NK02 468 aa18.49■□□□□ 0.55
CPNE1-228ENST00000498814 MPHOSPH10O00566 681 aaKnown RBP18.49■□□□□ 0.55
CPNE1-228ENST00000498814 FGRP09769 529 aa18.49■□□□□ 0.55
CPNE1-228ENST00000498814 AKR1B1P15121 316 aa18.49■□□□□ 0.55
CPNE1-228ENST00000498814 SPP2Q13103 211 aa18.49■□□□□ 0.55
CPNE1-228ENST00000498814 PRRT2Q7Z6L0 340 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-228ENST00000498814 ZNF444Q8N0Y2 327 aaPredicted RBP18.49■□□□□ 0.55
CPNE1-228ENST00000498814 PTPN18Q99952 460 aa18.49■□□□□ 0.55
CPNE1-228ENST00000498814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.49■□□□□ 0.55
CPNE1-228ENST00000498814 LOC285556D6RIA3 1793 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 ZNF213O14771 459 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 PTH1RQ03431 593 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 MOGSQ13724 837 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 SEPT2Q15019 361 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 RAB3GAP1Q15042 981 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 KIAA1211Q6ZU35 1233 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 IFNL1Q8IU54 200 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 BEGAINQ9BUH8 593 aa18.48■□□□□ 0.55
CPNE1-228ENST00000498814 IGF2BP3O00425 579 aaKnown RBP eCLIP18.47■□□□□ 0.552e-7■■■■□ 20.3
CPNE1-228ENST00000498814 CA12O43570 354 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 ORC4O43929 436 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 PRDM1O75626 825 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 ALDH1A1P00352 501 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 PCP11498 1178 aaKnown RBP18.47■□□□□ 0.55
CPNE1-228ENST00000498814 BACE1P56817 501 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 HAND2P61296 217 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 IMMTQ16891 758 aaKnown RBP18.47■□□□□ 0.55
CPNE1-228ENST00000498814 SH3D19Q5HYK7 790 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 OTUD7BQ6GQQ9 843 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 FASTKD5Q7L8L6 764 aaKnown RBP18.47■□□□□ 0.55
CPNE1-228ENST00000498814 MAP4K1Q92918 833 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 NBPF3Q9H094 633 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 RNF186Q9NXI6 227 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 SAGE1Q9NXZ1 904 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 TACC3Q9Y6A5 838 aa18.47■□□□□ 0.55
CPNE1-228ENST00000498814 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
CPNE1-228ENST00000498814 C19orf81C9J6K1 198 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms