RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 SATB1Q01826 763 aa15.84■□□□□ 0.13
ATP13A1-214ENST00000497556 RPAINQ86UA6 219 aa15.84■□□□□ 0.13
ATP13A1-214ENST00000497556 CCNL1Q9UK58 526 aaPredicted RBP15.84■□□□□ 0.13
ATP13A1-214ENST00000497556 TMEM232C9JQI7 657 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 SERPINC1P01008 464 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 SLC3A2P08195 630 aaKnown RBP15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 HNRNPH1P31943 449 aaKnown RBP15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 GREM2Q9H772 168 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 GJB4Q9NTQ9 266 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 PUF60Q9UHX1 559 aaKnown RBP15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 STX10O60499 249 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 PDE8AO60658 829 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 PTPN21Q16825 1174 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 SMIM5Q71RC9 77 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 CEP112Q8N8E3 955 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 SH3TC1Q8TE82 1336 aa15.83■□□□□ 0.12
ATP13A1-214ENST00000497556 PFKFB2O60825 505 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 ITGA6P23229 1130 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 VSNL1P62760 191 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 PARP10Q53GL7 1025 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 RAB11FIP4Q86YS3 637 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 LLPHQ9BRT6 129 aaKnown RBP15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 ZNF652Q9Y2D9 606 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 LRRIQ3A6PVS8 624 aaPredicted RBP15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 RNF40O75150 1001 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 ATP5JP18859 108 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 USP8P40818 1118 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 LIG3P49916 1009 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 AFAP1L1Q8TED9 768 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 ACBD3Q9H3P7 528 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 GPR108Q9NPR9 543 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 CDC23Q9UJX2 597 aa15.82■□□□□ 0.12
ATP13A1-214ENST00000497556 EP400Q96L91 3159 aa15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 TDO2P48775 406 aa15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 TBX2Q13207 712 aaPredicted RBP15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 KARSQ15046 597 aaKnown RBP15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 RC3H1Q5TC82 1133 aaKnown RBP15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 ISM2Q6H9L7 571 aa15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 DHX37Q8IY37 1157 aaKnown RBP15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 CLIC6Q96NY7 704 aa15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 GBP3Q9H0R5 595 aa15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 C4BP0C0L5 1744 aa15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 CASZ1Q86V15 1759 aa15.81■□□□□ 0.12
ATP13A1-214ENST00000497556 CCDC189A1A4V9 331 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 TUBB4BP68371 445 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 MYL5Q02045 173 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 TTLL5Q6EMB2 1281 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 NEUROD6Q96NK8 337 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 IRX2Q9BZI1 471 aaPredicted RBP15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 MRPL44Q9H9J2 332 aaKnown RBP15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 INTS13Q9NVM9 706 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 ANKRD18BA2A2Z9 1011 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 GNPATO15228 680 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 PRPF6O94906 941 aaKnown RBP15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 NTSR2O95665 410 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 FDPSP14324 419 aaKnown RBP15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 TIMM10P62072 90 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 KRT32Q14532 448 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 MCMDC2Q4G0Z9 681 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 FBXW10Q5XX13 1052 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 RTEL1Q9NZ71 1219 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 CEP126Q9P2H0 1117 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 RIC1Q4ADV7 1423 aa15.8■□□□□ 0.12
ATP13A1-214ENST00000497556 SPEF2Q9C093 1822 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 AARSP49588 968 aaKnown RBP eCLIP15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 CLEC4GQ6UXB4 293 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 TC2NQ8N9U0 490 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 DESI2Q9BSY9 194 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 BCCIPQ9P287 314 aaKnown RBP eCLIP15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 U3KPZ7 1027 aaPredicted RBP15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 C4AP0C0L4 1744 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 LRP5O75197 1615 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 RPS6KA4O75676 772 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 SYF2O95926 243 aaKnown RBP15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 CLIC4Q9Y696 253 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 SALL1Q9NSC2 1324 aa15.79■□□□□ 0.12
ATP13A1-214ENST00000497556 GOLIM4O00461 696 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 SHOX2O60902 331 aaPredicted RBP15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 RHOXF2BP0C7M4 288 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 LINC00301Q8NCQ3 95 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 RHOXF2Q9BQY4 288 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 VIPAS39Q9H9C1 493 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 TAOK2Q9UL54 1235 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 FAM169AQ9Y6X4 670 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 ZNF202O95125 648 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 EXOSC10Q01780 885 aaKnown RBP15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 TRDNQ13061 729 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 LDHAL6AQ6ZMR3 332 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 DHX32Q7L7V1 743 aaKnown RBP15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 KRT27Q7Z3Y8 459 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 CNPY4Q8N129 248 aa15.78■□□□□ 0.12
ATP13A1-214ENST00000497556 MYO1BO43795 1136 aa15.77■□□□□ 0.12
ATP13A1-214ENST00000497556 POLR3DP05423 398 aaPredicted RBP15.77■□□□□ 0.12
ATP13A1-214ENST00000497556 AMIGO3Q86WK7 504 aa15.77■□□□□ 0.12
ATP13A1-214ENST00000497556 FAM212AQ96EL1 285 aa15.77■□□□□ 0.12
ATP13A1-214ENST00000497556 HAUS7Q99871 368 aa15.77■□□□□ 0.12
ATP13A1-214ENST00000497556 TACO1Q9BSH4 297 aaKnown RBP15.77■□□□□ 0.12
ATP13A1-214ENST00000497556 A1CFQ9NQ94 594 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms