RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 FLT3LGP49771 235 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 UBXN2AP68543 259 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 FAM110CQ1W6H9 321 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 SH3D19Q5HYK7 790 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 METTL16Q86W50 562 aaKnown RBP15.75■□□□□ 0.11
FN1-226ENST00000496542 CERS3Q8IU89 383 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 SIRT2Q8IXJ6 389 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 WDR18Q9BV38 432 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 ASCC2Q9H1I8 757 aaPredicted RBP15.75■□□□□ 0.11
FN1-226ENST00000496542 TMOD4Q9NZQ9 345 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 TAOK2Q9UL54 1235 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 ZBTB21Q9ULJ3 1066 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 NAV1Q8NEY1 1877 aa15.75■□□□□ 0.11
FN1-226ENST00000496542 ADCY3O60266 1144 aa15.74■□□□□ 0.11
FN1-226ENST00000496542 ELNP15502 786 aa15.74■□□□□ 0.11
FN1-226ENST00000496542 GCLCP48506 637 aaPredicted RBP15.74■□□□□ 0.11
FN1-226ENST00000496542 BACE1P56817 501 aa15.74■□□□□ 0.11
FN1-226ENST00000496542 IRX3P78415 501 aaPredicted RBP15.74■□□□□ 0.11
FN1-226ENST00000496542 COA7Q96BR5 231 aa15.74■□□□□ 0.11
FN1-226ENST00000496542 SHISA4Q96DD7 197 aa15.74■□□□□ 0.11
FN1-226ENST00000496542 DNAJC2Q99543 621 aaKnown RBP15.74■□□□□ 0.11
FN1-226ENST00000496542 RNF208Q9H0X6 261 aa15.74■□□□□ 0.11
FN1-226ENST00000496542 PDE6AP16499 860 aa15.73■□□□□ 0.11
FN1-226ENST00000496542 TTF1Q15361 905 aaPredicted RBP15.73■□□□□ 0.11
FN1-226ENST00000496542 CHMP4BQ9H444 224 aaKnown RBP15.73■□□□□ 0.11
FN1-226ENST00000496542 GINM1Q9NU53 330 aa15.73■□□□□ 0.11
FN1-226ENST00000496542 TRIOBPQ9H2D6 2365 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 DDX60LQ5H9U9 1706 aaKnown RBP15.72■□□□□ 0.11
FN1-226ENST00000496542 MAGEB6P1A0A0J9YX57 407 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 USP17L10C9JJH3 530 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 GOLIM4O00461 696 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 RAB11FIP3O75154 756 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 GH2P01242 217 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 INHAP05111 366 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 SLC9C2Q5TAH2 1124 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 TMED8Q6PL24 325 aaPredicted RBP15.72■□□□□ 0.11
FN1-226ENST00000496542 NKX2-3Q8TAU0 364 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 RIOK1Q9BRS2 568 aaKnown RBP15.72■□□□□ 0.11
FN1-226ENST00000496542 UNC93B1Q9H1C4 597 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 SERPINB13Q9UIV8 391 aa15.72■□□□□ 0.11
FN1-226ENST00000496542 C19orf81C9J6K1 198 aa15.71■□□□□ 0.11
FN1-226ENST00000496542 GJB1P08034 283 aa15.71■□□□□ 0.11
FN1-226ENST00000496542 IRF5Q13568 498 aa15.71■□□□□ 0.11
FN1-226ENST00000496542 C20orf194Q5TEA3 1177 aa15.71■□□□□ 0.11
FN1-226ENST00000496542 TTC6Q86TZ1 520 aa15.71■□□□□ 0.11
FN1-226ENST00000496542 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.71■□□□□ 0.11
FN1-226ENST00000496542 GCC1Q96CN9 775 aa15.71■□□□□ 0.11
FN1-226ENST00000496542 EDC3Q96F86 508 aaKnown RBP15.71■□□□□ 0.11
FN1-226ENST00000496542 EHD4Q9H223 541 aa15.71■□□□□ 0.11
FN1-226ENST00000496542 ZNF532Q9HCE3 1301 aa15.7■□□□□ 0.1
FN1-226ENST00000496542 GJA8P48165 433 aa15.7■□□□□ 0.1
FN1-226ENST00000496542 ZYXQ15942 572 aaKnown RBP15.7■□□□□ 0.1
FN1-226ENST00000496542 PXYLP1Q8TE99 480 aa15.7■□□□□ 0.1
FN1-226ENST00000496542 P2RX7Q99572 595 aaKnown RBP15.7■□□□□ 0.1
FN1-226ENST00000496542 FEZ1Q99689 392 aa15.7■□□□□ 0.1
FN1-226ENST00000496542 CRNKL1Q9BZJ0 848 aaKnown RBP15.7■□□□□ 0.1
FN1-226ENST00000496542 PEX10O60683 326 aa15.69■□□□□ 0.1
FN1-226ENST00000496542 POLR3DP05423 398 aaPredicted RBP15.69■□□□□ 0.1
FN1-226ENST00000496542 HOXA7P31268 230 aaPredicted RBP15.69■□□□□ 0.1
FN1-226ENST00000496542 HERVK_113P62684 666 aa15.69■□□□□ 0.1
FN1-226ENST00000496542 RAB3GAP1Q15042 981 aa15.69■□□□□ 0.1
FN1-226ENST00000496542 CERKLQ49MI3 558 aaPredicted RBP15.69■□□□□ 0.1
FN1-226ENST00000496542 TATDN1Q6P1N9 297 aa15.69■□□□□ 0.1
FN1-226ENST00000496542 USP17L2Q6R6M4 530 aa15.69■□□□□ 0.1
FN1-226ENST00000496542 U2AF1L4Q8WU68 220 aaKnown RBP15.69■□□□□ 0.1
FN1-226ENST00000496542 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
FN1-226ENST00000496542 MORF4L1Q9UBU8 362 aa15.69■□□□□ 0.1
FN1-226ENST00000496542 MYH7P12883 1935 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 PLCD1P51178 756 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 ABCB5Q2M3G0 1257 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 LCORLQ8N3X6 602 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 TXNRD2Q9NNW7 524 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 EMILIN3Q9NT22 766 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 PAG1Q9NWQ8 432 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 MCM9Q9NXL9 1143 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 PLXNB2O15031 1838 aa15.68■□□□□ 0.1
FN1-226ENST00000496542 MYH8P13535 1937 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 BAZ2AQ9UIF9 1905 aaKnown RBP15.67■□□□□ 0.1
FN1-226ENST00000496542 TCRBV5S4A2TA0A5A2 114 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 FARP2O94887 1054 aaPredicted RBP15.67■□□□□ 0.1
FN1-226ENST00000496542 SHMT1P34896 483 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 EVX2Q03828 476 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 PDE3AQ14432 1141 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 GPRC5AQ8NFJ5 357 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 SDR42E1Q8WUS8 393 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 PAGR1Q9BTK6 254 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
FN1-226ENST00000496542 SMARCA5O60264 1052 aaPredicted RBP15.66■□□□□ 0.1
FN1-226ENST00000496542 SGPL1O95470 568 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 HMGCRP04035 888 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 ATP5JP18859 108 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 SLFNL1Q499Z3 407 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 HABP4Q5JVS0 413 aaKnown RBP15.66■□□□□ 0.1
FN1-226ENST00000496542 ACER1Q8TDN7 264 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 DPF3Q92784 378 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 DEFB118Q96PH6 123 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 LRRCC1Q9C099 1032 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 ARMT1Q9H993 441 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 GJD2Q9UKL4 321 aa15.66■□□□□ 0.1
FN1-226ENST00000496542 H0YGN5 161 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms