RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 GOLIM4O00461 696 aa17.81■□□□□ 0.44
ATG4B-223ENST00000493618 IGSF3O75054 1194 aa17.81■□□□□ 0.44
ATG4B-223ENST00000493618 ASNSP08243 561 aa17.81■□□□□ 0.44
ATG4B-223ENST00000493618 METTL16Q86W50 562 aaKnown RBP17.81■□□□□ 0.44
ATG4B-223ENST00000493618 EDC3Q96F86 508 aaKnown RBP17.81■□□□□ 0.44
ATG4B-223ENST00000493618 PNMA3Q9UL41 463 aa17.81■□□□□ 0.44
ATG4B-223ENST00000493618 ZBTB21Q9ULJ3 1066 aa17.81■□□□□ 0.44
ATG4B-223ENST00000493618 MAGEB6P1A0A0J9YX57 407 aa17.8■□□□□ 0.44
ATG4B-223ENST00000493618 TNPO2O14787 897 aaKnown RBP17.8■□□□□ 0.44
ATG4B-223ENST00000493618 SH3D19Q5HYK7 790 aa17.8■□□□□ 0.44
ATG4B-223ENST00000493618 WDR18Q9BV38 432 aa17.8■□□□□ 0.44
ATG4B-223ENST00000493618 ASCC2Q9H1I8 757 aaPredicted RBP17.8■□□□□ 0.44
ATG4B-223ENST00000493618 TAOK2Q9UL54 1235 aa17.8■□□□□ 0.44
ATG4B-223ENST00000493618 RAB11FIP3O75154 756 aa17.79■□□□□ 0.44
ATG4B-223ENST00000493618 ELNP15502 786 aa17.79■□□□□ 0.44
ATG4B-223ENST00000493618 PDE6AP16499 860 aa17.79■□□□□ 0.44
ATG4B-223ENST00000493618 FLT3LGP49771 235 aa17.79■□□□□ 0.44
ATG4B-223ENST00000493618 TTF1Q15361 905 aaPredicted RBP17.79■□□□□ 0.44
ATG4B-223ENST00000493618 SLC9C2Q5TAH2 1124 aa17.79■□□□□ 0.44
ATG4B-223ENST00000493618 RIOK1Q9BRS2 568 aaKnown RBP17.79■□□□□ 0.44
ATG4B-223ENST00000493618 TMOD4Q9NZQ9 345 aa17.79■□□□□ 0.44
ATG4B-223ENST00000493618 ZNF532Q9HCE3 1301 aa17.78■□□□□ 0.44
ATG4B-223ENST00000493618 SMARCA5O60264 1052 aaPredicted RBP17.78■□□□□ 0.44
ATG4B-223ENST00000493618 PEX10O60683 326 aa17.78■□□□□ 0.44
ATG4B-223ENST00000493618 GH2P01242 217 aa17.78■□□□□ 0.44
ATG4B-223ENST00000493618 CCL5P13501 91 aa17.78■□□□□ 0.44
ATG4B-223ENST00000493618 BACE1P56817 501 aa17.78■□□□□ 0.44
ATG4B-223ENST00000493618 PABPC4Q13310 644 aaKnown RBP eCLIP17.78■□□□□ 0.44
ATG4B-223ENST00000493618 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
ATG4B-223ENST00000493618 BOLA2Q9H3K6 86 aa17.78■□□□□ 0.44
ATG4B-223ENST00000493618 CHMP4BQ9H444 224 aaKnown RBP17.78■□□□□ 0.44
ATG4B-223ENST00000493618 ADCY3O60266 1144 aa17.77■□□□□ 0.44
ATG4B-223ENST00000493618 PLCD1P51178 756 aa17.77■□□□□ 0.44
ATG4B-223ENST00000493618 EVX2Q03828 476 aa17.77■□□□□ 0.44
ATG4B-223ENST00000493618 FAM110CQ1W6H9 321 aa17.77■□□□□ 0.44
ATG4B-223ENST00000493618 CERS3Q8IU89 383 aa17.77■□□□□ 0.44
ATG4B-223ENST00000493618 SLAIN1Q8ND83 568 aa17.77■□□□□ 0.44
ATG4B-223ENST00000493618 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.77■□□□□ 0.44
ATG4B-223ENST00000493618 SHISA4Q96DD7 197 aa17.77■□□□□ 0.44
ATG4B-223ENST00000493618 SERPINB13Q9UIV8 391 aa17.77■□□□□ 0.44
ATG4B-223ENST00000493618 TCRBV5S4A2TA0A5A2 114 aa17.76■□□□□ 0.43
ATG4B-223ENST00000493618 USP17L10C9JJH3 530 aa17.76■□□□□ 0.43
ATG4B-223ENST00000493618 POLR3DP05423 398 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-223ENST00000493618 GCLCP48506 637 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-223ENST00000493618 UBXN2AP68543 259 aa17.76■□□□□ 0.43
ATG4B-223ENST00000493618 IRX3P78415 501 aaPredicted RBP17.76■□□□□ 0.43
ATG4B-223ENST00000493618 PDE3AQ14432 1141 aa17.76■□□□□ 0.43
ATG4B-223ENST00000493618 ZYXQ15942 572 aaKnown RBP17.76■□□□□ 0.43
ATG4B-223ENST00000493618 LCORLQ8N3X6 602 aa17.76■□□□□ 0.43
ATG4B-223ENST00000493618 COA7Q96BR5 231 aa17.76■□□□□ 0.43
ATG4B-223ENST00000493618 P2RX7Q99572 595 aaKnown RBP17.76■□□□□ 0.43
ATG4B-223ENST00000493618 RNF208Q9H0X6 261 aa17.76■□□□□ 0.43
ATG4B-223ENST00000493618 UNC93B1Q9H1C4 597 aa17.76■□□□□ 0.43
ATG4B-223ENST00000493618 C19orf81C9J6K1 198 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 CHGBP05060 677 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 RAB3GAP1Q15042 981 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 TATDN1Q6P1N9 297 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 TTC6Q86TZ1 520 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 SDR42E1Q8WUS8 393 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 CRNKL1Q9BZJ0 848 aaKnown RBP17.75■□□□□ 0.43
ATG4B-223ENST00000493618 ARMT1Q9H993 441 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 GINM1Q9NU53 330 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 PAG1Q9NWQ8 432 aa17.75■□□□□ 0.43
ATG4B-223ENST00000493618 INHAP05111 366 aa17.74■□□□□ 0.43
ATG4B-223ENST00000493618 CYP2D6P10635 497 aa17.74■□□□□ 0.43
ATG4B-223ENST00000493618 SHMT1P34896 483 aa17.74■□□□□ 0.43
ATG4B-223ENST00000493618 ABCB5Q2M3G0 1257 aa17.74■□□□□ 0.43
ATG4B-223ENST00000493618 CERKLQ49MI3 558 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-223ENST00000493618 TMED8Q6PL24 325 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-223ENST00000493618 USP17L2Q6R6M4 530 aa17.74■□□□□ 0.43
ATG4B-223ENST00000493618 EHD4Q9H223 541 aa17.74■□□□□ 0.43
ATG4B-223ENST00000493618 EMILIN3Q9NT22 766 aa17.74■□□□□ 0.43
ATG4B-223ENST00000493618 ATP5JP18859 108 aa17.73■□□□□ 0.43
ATG4B-223ENST00000493618 HOXA7P31268 230 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-223ENST00000493618 HERVK_113P62684 666 aa17.73■□□□□ 0.43
ATG4B-223ENST00000493618 FEZ1Q99689 392 aa17.73■□□□□ 0.43
ATG4B-223ENST00000493618 LRRCC1Q9C099 1032 aa17.73■□□□□ 0.43
ATG4B-223ENST00000493618 TXNRD2Q9NNW7 524 aa17.73■□□□□ 0.43
ATG4B-223ENST00000493618 MCM9Q9NXL9 1143 aa17.73■□□□□ 0.43
ATG4B-223ENST00000493618 PRKAB2O43741 272 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 MBD4O95243 580 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 GJB1P08034 283 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 ADD2P35612 726 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 GJA8P48165 433 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 IRF5Q13568 498 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 HAUS7Q99871 368 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 PAGR1Q9BTK6 254 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 MORF4L1Q9UBU8 362 aa17.72■□□□□ 0.43
ATG4B-223ENST00000493618 PXYLP1Q8TE99 480 aa17.71■□□□□ 0.43
ATG4B-223ENST00000493618 CABP5Q9NP86 173 aa17.71■□□□□ 0.43
ATG4B-223ENST00000493618 DCP1AQ9NPI6 582 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-223ENST00000493618 RBPJLQ9UBG7 517 aa17.71■□□□□ 0.43
ATG4B-223ENST00000493618 MPHOSPH10O00566 681 aaKnown RBP17.7■□□□□ 0.42
ATG4B-223ENST00000493618 GUCY1A2P33402 732 aa17.7■□□□□ 0.42
ATG4B-223ENST00000493618 SEPT2Q15019 361 aa17.7■□□□□ 0.42
ATG4B-223ENST00000493618 Q3C1V9 767 aa17.7■□□□□ 0.42
ATG4B-223ENST00000493618 SLC44A5Q8NCS7 719 aa17.7■□□□□ 0.42
ATG4B-223ENST00000493618 NKX2-3Q8TAU0 364 aa17.7■□□□□ 0.42
ATG4B-223ENST00000493618 U2AF1L4Q8WU68 220 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms