RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 LIG3P49916 1009 aa6.06□□□□□ -1.44
VPS36-205ENST00000492650 PSMD2Q13200 908 aa6.06□□□□□ -1.44
VPS36-205ENST00000492650 ZNF648Q5T619 568 aaPredicted RBP6.06□□□□□ -1.44
VPS36-205ENST00000492650 MEI1Q5TIA1 1274 aa6.06□□□□□ -1.44
VPS36-205ENST00000492650 PRAMEF13Q5VWM6 474 aa6.06□□□□□ -1.44
VPS36-205ENST00000492650 AGMOQ6ZNB7 445 aa6.06□□□□□ -1.44
VPS36-205ENST00000492650 MFSD4AQ8N468 514 aa6.06□□□□□ -1.44
VPS36-205ENST00000492650 JARID2Q92833 1246 aaPredicted RBP6.06□□□□□ -1.44
VPS36-205ENST00000492650 PARP2Q9UGN5 583 aa6.06□□□□□ -1.44
VPS36-205ENST00000492650 GFRA2O00451 464 aa6.05□□□□□ -1.44
VPS36-205ENST00000492650 PGRP06401 933 aa6.05□□□□□ -1.44
VPS36-205ENST00000492650 PDIA4P13667 645 aaKnown RBP6.05□□□□□ -1.44
VPS36-205ENST00000492650 CAP2P40123 477 aa6.05□□□□□ -1.44
VPS36-205ENST00000492650 XPCQ01831 940 aaPredicted RBP6.05□□□□□ -1.44
VPS36-205ENST00000492650 FZD5Q13467 585 aa6.05□□□□□ -1.44
VPS36-205ENST00000492650 ZNF746Q6NUN9 644 aaPredicted RBP6.05□□□□□ -1.44
VPS36-205ENST00000492650 TMEM40Q8WWA1 233 aa6.05□□□□□ -1.44
VPS36-205ENST00000492650 CARS2Q9HA77 564 aaKnown RBP6.05□□□□□ -1.44
VPS36-205ENST00000492650 ATP13A1Q9HD20 1204 aa6.05□□□□□ -1.44
VPS36-205ENST00000492650 H3BS24 57 aa6.04□□□□□ -1.44
VPS36-205ENST00000492650 FARP2O94887 1054 aaPredicted RBP6.04□□□□□ -1.44
VPS36-205ENST00000492650 CST3P01034 146 aaPredicted RBP6.04□□□□□ -1.44
VPS36-205ENST00000492650 CYP7A1P22680 504 aa6.04□□□□□ -1.44
VPS36-205ENST00000492650 TAF1CQ15572 869 aaPredicted RBP6.04□□□□□ -1.44
VPS36-205ENST00000492650 TSNAXIP1Q2TAA8 658 aa6.04□□□□□ -1.44
VPS36-205ENST00000492650 DIEXFQ68CQ4 756 aaKnown RBP6.04□□□□□ -1.44
VPS36-205ENST00000492650 CDH24Q86UP0 819 aa6.04□□□□□ -1.44
VPS36-205ENST00000492650 FLAD1Q8NFF5 587 aa6.04□□□□□ -1.44
VPS36-205ENST00000492650 DPH2Q9BQC3 489 aaPredicted RBP6.04□□□□□ -1.44
VPS36-205ENST00000492650 SEMA3GQ9NS98 782 aa6.04□□□□□ -1.44
VPS36-205ENST00000492650 LMCD1Q9NZU5 365 aa6.04□□□□□ -1.44
VPS36-205ENST00000492650 TLR6Q9Y2C9 796 aa6.04□□□□□ -1.44
VPS36-205ENST00000492650 ZNF865P0CJ78 1059 aaPredicted RBP6.03□□□□□ -1.44
VPS36-205ENST00000492650 RLBP1P12271 317 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 TFE3P19532 575 aaPredicted RBP6.03□□□□□ -1.44
VPS36-205ENST00000492650 DAB2P98082 770 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 PDE4BQ07343 736 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 KCNMB1Q16558 191 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 ZSWIM9Q86XI8 627 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 UBE2FQ969M7 185 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 ZSWIM5Q9P217 1185 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 TJP2Q9UDY2 1190 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 CTNND2Q9UQB3 1225 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 TACC3Q9Y6A5 838 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 CAPN6Q9Y6Q1 641 aa6.03□□□□□ -1.44
VPS36-205ENST00000492650 AFMP43652 599 aa6.02□□□□□ -1.45
VPS36-205ENST00000492650 RPL6Q02878 288 aaKnown RBP6.02□□□□□ -1.45
VPS36-205ENST00000492650 ZNF124Q15973 351 aa6.02□□□□□ -1.45
VPS36-205ENST00000492650 SLC6A19Q695T7 634 aa6.02□□□□□ -1.45
VPS36-205ENST00000492650 C22orf34Q6ZV56 151 aa6.02□□□□□ -1.45
VPS36-205ENST00000492650 NPAS4Q8IUM7 802 aa6.02□□□□□ -1.45
VPS36-205ENST00000492650 KSR1Q8IVT5 923 aa6.02□□□□□ -1.45
VPS36-205ENST00000492650 TMEM87BQ96K49 555 aa6.02□□□□□ -1.45
VPS36-205ENST00000492650 FAM161BQ96MY7 647 aa6.02□□□□□ -1.45
VPS36-205ENST00000492650 LRRC10BA6NIK2 292 aa6.01□□□□□ -1.45
VPS36-205ENST00000492650 F6X3S4 739 aa6.01□□□□□ -1.45
VPS36-205ENST00000492650 KIR3DL1P43629 444 aa6.01□□□□□ -1.45
VPS36-205ENST00000492650 TNK2Q07912 1038 aa6.01□□□□□ -1.45
VPS36-205ENST00000492650 PKN1Q16512 942 aa6.01□□□□□ -1.45
VPS36-205ENST00000492650 MRPL41Q8IXM3 137 aaKnown RBP6.01□□□□□ -1.45
VPS36-205ENST00000492650 COX4I2Q96KJ9 171 aa6.01□□□□□ -1.45
VPS36-205ENST00000492650 SLC38A3Q99624 504 aa6.01□□□□□ -1.45
VPS36-205ENST00000492650 NOC4LQ9BVI4 516 aaKnown RBP6.01□□□□□ -1.45
VPS36-205ENST00000492650 ST14Q9Y5Y6 855 aa6.01□□□□□ -1.45
VPS36-205ENST00000492650 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
VPS36-205ENST00000492650 ETV3P41162 512 aa6□□□□□ -1.45
VPS36-205ENST00000492650 ST13P50502 369 aaKnown RBP6□□□□□ -1.45
VPS36-205ENST00000492650 MLANAQ16655 118 aa6□□□□□ -1.45
VPS36-205ENST00000492650 THAP5Q7Z6K1 395 aa6□□□□□ -1.45
VPS36-205ENST00000492650 MCATQ8IVS2 390 aaKnown RBP6□□□□□ -1.45
VPS36-205ENST00000492650 FAM53CQ9NYF3 392 aa6□□□□□ -1.45
VPS36-205ENST00000492650 USP31Q70CQ4 1352 aa6□□□□□ -1.45
VPS36-205ENST00000492650 BPNT1O95861 308 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 CTSHP09668 335 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 JAG1P78504 1218 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 FYB2Q5VWT5 728 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 MPZL3Q6UWV2 235 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 DNAJC14Q6Y2X3 702 aaPredicted RBP5.99□□□□□ -1.45
VPS36-205ENST00000492650 TMC4Q7Z404 712 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 PHC3Q8NDX5 983 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 ACSF2Q96CM8 615 aaPredicted RBP5.99□□□□□ -1.45
VPS36-205ENST00000492650 LIN37Q96GY3 246 aaPredicted RBP5.99□□□□□ -1.45
VPS36-205ENST00000492650 KIRREL1Q96J84 757 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 MRS2Q9HD23 443 aa5.99□□□□□ -1.45
VPS36-205ENST00000492650 ZNF503-AS2A6NEH8 195 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 SORBS3O60504 671 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 PLCG1P19174 1290 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 GDNFP39905 211 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 TMEM67Q5HYA8 995 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 BNC2Q6ZN30 1099 aaPredicted RBP5.98□□□□□ -1.45
VPS36-205ENST00000492650 RELL1Q8IUW5 271 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 PIWIL2Q8TC59 973 aaKnown RBP5.98□□□□□ -1.45
VPS36-205ENST00000492650 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.98□□□□□ -1.45
VPS36-205ENST00000492650 SLAMF8Q9P0V8 285 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 VTI1BQ9UEU0 232 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 ADAM30Q9UKF2 790 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 CEP131Q9UPN4 1083 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 CORINQ9Y5Q5 1042 aa5.98□□□□□ -1.45
VPS36-205ENST00000492650 UPK3BL1B0FP48 263 aa5.97□□□□□ -1.45
VPS36-205ENST00000492650 UPK3BL2E5RIL1 263 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms