RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 C16orf86Q6ZW13 317 aa17.2■□□□□ 0.34
HLA-F-229ENST00000489502 IRF6O14896 467 aa17.19■□□□□ 0.34
HLA-F-229ENST00000489502 GH2P01242 217 aa17.19■□□□□ 0.34
HLA-F-229ENST00000489502 PTPRAP18433 802 aa17.19■□□□□ 0.34
HLA-F-229ENST00000489502 CDK8P49336 464 aa17.19■□□□□ 0.34
HLA-F-229ENST00000489502 PPARAQ07869 468 aa17.19■□□□□ 0.34
HLA-F-229ENST00000489502 PPIL2Q13356 520 aa17.19■□□□□ 0.34
HLA-F-229ENST00000489502 JMYQ8N9B5 988 aa17.19■□□□□ 0.34
HLA-F-229ENST00000489502 SWAP70Q9UH65 585 aa17.19■□□□□ 0.34
HLA-F-229ENST00000489502 SGSM2O43147 1006 aa17.18■□□□□ 0.34
HLA-F-229ENST00000489502 FGAP02671 866 aa17.18■□□□□ 0.34
HLA-F-229ENST00000489502 MAP2K2P36507 400 aa17.18■□□□□ 0.34
HLA-F-229ENST00000489502 HAND2P61296 217 aa17.18■□□□□ 0.34
HLA-F-229ENST00000489502 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
HLA-F-229ENST00000489502 CERKLQ49MI3 558 aaPredicted RBP17.18■□□□□ 0.34
HLA-F-229ENST00000489502 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
HLA-F-229ENST00000489502 ZHX2Q9Y6X8 837 aa17.18■□□□□ 0.34
HLA-F-229ENST00000489502 ZMYM6O95789 1325 aa17.18■□□□□ 0.34
HLA-F-229ENST00000489502 GREB1LQ9C091 1923 aaPredicted RBP17.17■□□□□ 0.34
HLA-F-229ENST00000489502 MPHOSPH10O00566 681 aaKnown RBP17.17■□□□□ 0.34
HLA-F-229ENST00000489502 CDC45O75419 566 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 PRDM1O75626 825 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 ASNSP08243 561 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 AKR1B1P15121 316 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 PPATQ06203 517 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 ALX1Q15699 326 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 ABCB5Q2M3G0 1257 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 CLEC10AQ8IUN9 316 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
HLA-F-229ENST00000489502 LOC285556D6RIA3 1793 aa17.16■□□□□ 0.34
HLA-F-229ENST00000489502 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
HLA-F-229ENST00000489502 TRIM75PA6NK02 468 aa17.16■□□□□ 0.34
HLA-F-229ENST00000489502 CCL15Q16663 113 aa17.16■□□□□ 0.34
HLA-F-229ENST00000489502 BRI3BPQ8WY22 251 aa17.16■□□□□ 0.34
HLA-F-229ENST00000489502 MS4A4AQ96JQ5 239 aa17.16■□□□□ 0.34
HLA-F-229ENST00000489502 DSCC1Q9BVC3 393 aa17.16■□□□□ 0.34
HLA-F-229ENST00000489502 MANSC4A6NHS7 340 aaPredicted RBP17.15■□□□□ 0.34
HLA-F-229ENST00000489502 USP17L5A8MUK1 530 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 RASA1P20936 1047 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 GTF2A2P52657 109 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 PTH1RQ03431 593 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 SREBF2Q12772 1141 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 SNAPC2Q13487 334 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 RAB3GAP1Q15042 981 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 TBC1D10CQ8IV04 446 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 NBPF3Q9H094 633 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 KCNH4Q9UQ05 1017 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 TACC3Q9Y6A5 838 aa17.15■□□□□ 0.34
HLA-F-229ENST00000489502 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
HLA-F-229ENST00000489502 HSPA1AP0DMV8 641 aaKnown RBP17.14■□□□□ 0.33
HLA-F-229ENST00000489502 HSPA1BP0DMV9 641 aaKnown RBP17.14■□□□□ 0.33
HLA-F-229ENST00000489502 GUCY1A2P33402 732 aa17.14■□□□□ 0.33
HLA-F-229ENST00000489502 DGKZQ13574 1117 aa17.14■□□□□ 0.33
HLA-F-229ENST00000489502 SEPT2Q15019 361 aa17.14■□□□□ 0.33
HLA-F-229ENST00000489502 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
HLA-F-229ENST00000489502 CABP5Q9NP86 173 aa17.14■□□□□ 0.33
HLA-F-229ENST00000489502 INCENPQ9NQS7 918 aa17.14■□□□□ 0.33
HLA-F-229ENST00000489502 AFG3L2Q9Y4W6 797 aa17.14■□□□□ 0.33
HLA-F-229ENST00000489502 SLC3A2P08195 630 aaKnown RBP17.13■□□□□ 0.33
HLA-F-229ENST00000489502 MAP2K1Q02750 393 aaPredicted RBP17.13■□□□□ 0.33
HLA-F-229ENST00000489502 SPP2Q13103 211 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 MTMR2Q13614 643 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 ZNF280CQ8ND82 737 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 GINM1Q9NU53 330 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 WBP1LQ9NX94 342 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 TSKSQ9UJT2 592 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
HLA-F-229ENST00000489502 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
HLA-F-229ENST00000489502 A0A0G2JLL6 359 aaPredicted RBP17.12■□□□□ 0.33
HLA-F-229ENST00000489502 CETPP11597 493 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 PDE4BQ07343 736 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 CASC1Q6TDU7 716 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 GADL1Q6ZQY3 521 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 TMEM179Q6ZVK1 233 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 PRRT2Q7Z6L0 340 aaPredicted RBP17.12■□□□□ 0.33
HLA-F-229ENST00000489502 IFNL1Q8IU54 200 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 CCDC17Q96LX7 622 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 PTPN18Q99952 460 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 AS3MTQ9HBK9 375 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 TOMM22Q9NS69 142 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 NEDD4P46934 1319 aa17.12■□□□□ 0.33
HLA-F-229ENST00000489502 TESPA1A2RU30 521 aaPredicted RBP17.11■□□□□ 0.33
HLA-F-229ENST00000489502 CXCL11O14625 94 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 TM4SF4P48230 202 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 HMGCS2P54868 508 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 ICA1Q05084 483 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 MOGSQ13724 837 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
HLA-F-229ENST00000489502 FAM47AQ5JRC9 791 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
HLA-F-229ENST00000489502 FAM43AQ8N2R8 423 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 FEZ1Q99689 392 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 WDR18Q9BV38 432 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.11■□□□□ 0.33
HLA-F-229ENST00000489502 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
HLA-F-229ENST00000489502 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
HLA-F-229ENST00000489502 BTBD19C9JJ37 291 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms