RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CALM3P0DP25 149 aa30■■■□□ 2.39
HLA-C-208ENST00000487245 IQCA1Q86XH1 822 aa30■■■□□ 2.39
HLA-C-208ENST00000487245 DIS3L2Q8IYB7 885 aaKnown RBP30■■■□□ 2.39
HLA-C-208ENST00000487245 PDCL2Q8N4E4 241 aa30■■■□□ 2.39
HLA-C-208ENST00000487245 NUP133Q8WUM0 1156 aa30■■■□□ 2.39
HLA-C-208ENST00000487245 USP27XA6NNY8 438 aa29.99■■■□□ 2.39
HLA-C-208ENST00000487245 BIN1O00499 593 aa29.99■■■□□ 2.39
HLA-C-208ENST00000487245 XBP1P17861 261 aa29.99■■■□□ 2.39
HLA-C-208ENST00000487245 STK11IPQ8N1F8 1099 aa29.99■■■□□ 2.39
HLA-C-208ENST00000487245 CRNKL1Q9BZJ0 848 aaKnown RBP29.99■■■□□ 2.39
HLA-C-208ENST00000487245 RBM28Q9NW13 759 aaKnown RBP29.99■■■□□ 2.39
HLA-C-208ENST00000487245 DUOX1Q9NRD9 1551 aa29.99■■■□□ 2.39
HLA-C-208ENST00000487245 SMC2O95347 1197 aa29.99■■■□□ 2.39
HLA-C-208ENST00000487245 GUCY1A2P33402 732 aa29.99■■■□□ 2.39
HLA-C-208ENST00000487245 AKAP17AQ02040 695 aaKnown RBP29.99■■■□□ 2.39
HLA-C-208ENST00000487245 CATIPQ7Z7H3 387 aa29.99■■■□□ 2.39
HLA-C-208ENST00000487245 KRI1Q8N9T8 703 aaKnown RBP29.99■■■□□ 2.39
HLA-C-208ENST00000487245 BTBD18B2RXH4 712 aa29.98■■■□□ 2.39
HLA-C-208ENST00000487245 NCBP1Q09161 790 aaKnown RBP29.98■■■□□ 2.39
HLA-C-208ENST00000487245 HSD3B7Q9H2F3 369 aa29.98■■■□□ 2.39
HLA-C-208ENST00000487245 ATP8A2Q9NTI2 1148 aa29.98■■■□□ 2.39
HLA-C-208ENST00000487245 SPTY2D1Q68D10 685 aaPredicted RBP29.97■■■□□ 2.39
HLA-C-208ENST00000487245 CTR9Q6PD62 1173 aa29.97■■■□□ 2.39
HLA-C-208ENST00000487245 KRBA2Q6ZNG9 492 aa29.97■■■□□ 2.39
HLA-C-208ENST00000487245 PTF1AQ7RTS3 328 aa29.97■■■□□ 2.39
HLA-C-208ENST00000487245 ZNF384Q8TF68 577 aa29.97■■■□□ 2.39
HLA-C-208ENST00000487245 MORC2Q9Y6X9 1032 aaPredicted RBP29.97■■■□□ 2.39
HLA-C-208ENST00000487245 MYH13Q9UKX3 1938 aa29.97■■■□□ 2.39
HLA-C-208ENST00000487245 PSDA5PKW4 1024 aaPredicted RBP29.97■■■□□ 2.39
HLA-C-208ENST00000487245 FANCCQ00597 558 aa29.97■■■□□ 2.39
HLA-C-208ENST00000487245 MECOMQ03112 1051 aa29.97■■■□□ 2.39
HLA-C-208ENST00000487245 CEP131Q9UPN4 1083 aa29.97■■■□□ 2.39
HLA-C-208ENST00000487245 ORC4O43929 436 aa29.96■■■□□ 2.39
HLA-C-208ENST00000487245 MYL5Q02045 173 aa29.96■■■□□ 2.39
HLA-C-208ENST00000487245 IFIT1BQ5T764 474 aaKnown RBP29.96■■■□□ 2.39
HLA-C-208ENST00000487245 ARMCX5Q6P1M9 558 aa29.96■■■□□ 2.39
HLA-C-208ENST00000487245 TMC6Q7Z403 805 aa29.96■■■□□ 2.39
HLA-C-208ENST00000487245 ENAHQ8N8S7 591 aaPredicted RBP29.96■■■□□ 2.39
HLA-C-208ENST00000487245 NOL10Q9BSC4 688 aaKnown RBP29.96■■■□□ 2.39
HLA-C-208ENST00000487245 KCNH3Q9ULD8 1083 aa29.96■■■□□ 2.39
HLA-C-208ENST00000487245 THSD7AQ9UPZ6 1657 aa29.96■■■□□ 2.39
HLA-C-208ENST00000487245 CBFA2T2O43439 604 aa29.95■■■□□ 2.39
HLA-C-208ENST00000487245 TUBB4AP04350 444 aa29.95■■■□□ 2.39
HLA-C-208ENST00000487245 NT5C2P49902 561 aa29.95■■■□□ 2.39
HLA-C-208ENST00000487245 METTL16Q86W50 562 aaKnown RBP29.95■■■□□ 2.39
HLA-C-208ENST00000487245 SMAP1Q8IYB5 467 aaPredicted RBP29.95■■■□□ 2.39
HLA-C-208ENST00000487245 ARHGEF1Q92888 912 aaKnown RBP29.95■■■□□ 2.39
HLA-C-208ENST00000487245 KCNJ14Q9UNX9 436 aa29.95■■■□□ 2.39
HLA-C-208ENST00000487245 UBE2Q2LH0YL09 131 aa29.95■■■□□ 2.38
HLA-C-208ENST00000487245 TM4SF1P30408 202 aa29.95■■■□□ 2.38
HLA-C-208ENST00000487245 SMIM5Q71RC9 77 aa29.95■■■□□ 2.38
HLA-C-208ENST00000487245 HOOK1Q9UJC3 728 aaKnown RBP29.95■■■□□ 2.38
HLA-C-208ENST00000487245 USP21Q9UK80 565 aa29.95■■■□□ 2.38
HLA-C-208ENST00000487245 TAOK2Q9UL54 1235 aa29.95■■■□□ 2.38
HLA-C-208ENST00000487245 PRPF3O43395 683 aaKnown RBP29.94■■■□□ 2.38
HLA-C-208ENST00000487245 NRDCO43847 1150 aa29.94■■■□□ 2.38
HLA-C-208ENST00000487245 DDAH1O94760 285 aa29.94■■■□□ 2.38
HLA-C-208ENST00000487245 SBK1Q52WX2 424 aa29.94■■■□□ 2.38
HLA-C-208ENST00000487245 ZNF579Q8NAF0 562 aaKnown RBP29.94■■■□□ 2.38
HLA-C-208ENST00000487245 CLIC6Q96NY7 704 aa29.94■■■□□ 2.38
HLA-C-208ENST00000487245 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.94■■■□□ 2.38
HLA-C-208ENST00000487245 MAST2Q6P0Q8 1798 aa29.94■■■□□ 2.38
HLA-C-208ENST00000487245 USP17L12C9JPN9 530 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 USP17L21D6R901 530 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 SFPQP23246 707 aaKnown RBP eCLIP29.93■■■□□ 2.38
HLA-C-208ENST00000487245 PTPREP23469 700 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 DLEC1Q9Y238 1755 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 KLRK1P26718 216 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 TOB1P50616 345 aaPredicted RBP29.93■■■□□ 2.38
HLA-C-208ENST00000487245 PNOCQ13519 176 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 LONRF3Q496Y0 759 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 PPP4R3BQ5MIZ7 849 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 OLFM4Q6UX06 510 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 TFCP2L1Q9NZI6 479 aa29.93■■■□□ 2.38
HLA-C-208ENST00000487245 ARPP21Q9UBL0 812 aaPredicted RBP29.93■■■□□ 2.38
HLA-C-208ENST00000487245 BAZ2AQ9UIF9 1905 aaKnown RBP29.92■■■□□ 2.38
HLA-C-208ENST00000487245 MDM2Q00987 491 aaPredicted RBP29.92■■■□□ 2.38
HLA-C-208ENST00000487245 CCDC82Q8N4S0 544 aa29.92■■■□□ 2.38
HLA-C-208ENST00000487245 CNNM3Q8NE01 707 aa29.92■■■□□ 2.38
HLA-C-208ENST00000487245 FBXO2Q9UK22 296 aaPredicted RBP29.92■■■□□ 2.38
HLA-C-208ENST00000487245 MYH2Q9UKX2 1941 aa29.92■■■□□ 2.38
HLA-C-208ENST00000487245 SPATA31A6Q5VVP1 1343 aa29.92■■■□□ 2.38
HLA-C-208ENST00000487245 E4F1Q66K89 784 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-208ENST00000487245 DCP1AQ9NPI6 582 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-208ENST00000487245 LEMD3Q9Y2U8 911 aa29.91■■■□□ 2.38
HLA-C-208ENST00000487245 MYH6P13533 1939 aa29.91■■■□□ 2.38
HLA-C-208ENST00000487245 CCDC88AQ3V6T2 1871 aa29.91■■■□□ 2.38
HLA-C-208ENST00000487245 LMOD1P29536 600 aaPredicted RBP29.91■■■□□ 2.38
HLA-C-208ENST00000487245 RFC4P35249 363 aa29.91■■■□□ 2.38
HLA-C-208ENST00000487245 TRAPPC3LQ5T215 181 aa29.91■■■□□ 2.38
HLA-C-208ENST00000487245 KIF18AQ8NI77 898 aa29.91■■■□□ 2.38
HLA-C-208ENST00000487245 LY75O60449 1722 aa29.9■■■□□ 2.38
HLA-C-208ENST00000487245 CYP2D7A0A087X1C5 515 aa29.9■■■□□ 2.38
HLA-C-208ENST00000487245 NT5DC1Q5TFE4 455 aa29.9■■■□□ 2.38
HLA-C-208ENST00000487245 NPHP1O15259 732 aa29.89■■■□□ 2.38
HLA-C-208ENST00000487245 FUT2Q10981 343 aa29.89■■■□□ 2.38
HLA-C-208ENST00000487245 CMTR1Q8N1G2 835 aaKnown RBP29.89■■■□□ 2.38
HLA-C-208ENST00000487245 AATFQ9NY61 560 aaKnown RBP eCLIP29.89■■■□□ 2.38
HLA-C-208ENST00000487245 CGNQ9P2M7 1197 aaKnown RBP29.89■■■□□ 2.38
HLA-C-208ENST00000487245 TAF1LQ8IZX4 1826 aa29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms