RNA–Protein interactions for RNA: ENST00000486934.1

TRA2A-207, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 417 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-207ENST00000486934 MSMPQ1L6U9 139 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 SNAP47Q5SQN1 464 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 FAM196AQ6ZSG2 479 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 CBLL1Q75N03 491 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 HS2ST1Q7LGA3 356 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 TP53INP2Q8IXH6 220 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 RIN3Q8TB24 985 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 ZNF296Q8WUU4 475 aaPredicted RBP8.8□□□□□ -1
TRA2A-207ENST00000486934 HEXIM2Q96MH2 286 aaKnown RBP8.8□□□□□ -1
TRA2A-207ENST00000486934 OSBPL1AQ9BXW6 950 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 SSU72Q9NP77 194 aaKnown RBP8.8□□□□□ -1
TRA2A-207ENST00000486934 PICK1Q9NRD5 415 aa8.8□□□□□ -1
TRA2A-207ENST00000486934 SLITRK5O94991 958 aa8.79□□□□□ -1
TRA2A-207ENST00000486934 FOSL1P15407 271 aa8.79□□□□□ -1
TRA2A-207ENST00000486934 ETF1P62495 437 aaKnown RBP8.79□□□□□ -1
TRA2A-207ENST00000486934 HDLBPQ00341 1268 aaKnown RBP8.79□□□□□ -1
TRA2A-207ENST00000486934 HNRNPUQ00839 825 aaKnown RBP eCLIP8.79□□□□□ -1
TRA2A-207ENST00000486934 FAM181AQ8N9Y4 354 aa8.79□□□□□ -1
TRA2A-207ENST00000486934 ZNF507Q8TCN5 953 aa8.79□□□□□ -1
TRA2A-207ENST00000486934 ACSF2Q96CM8 615 aaPredicted RBP8.79□□□□□ -1
TRA2A-207ENST00000486934 EAF1Q96JC9 268 aaPredicted RBP8.79□□□□□ -1
TRA2A-207ENST00000486934 DPH2Q9BQC3 489 aaPredicted RBP8.79□□□□□ -1
TRA2A-207ENST00000486934 UBP1Q9NZI7 540 aa8.79□□□□□ -1
TRA2A-207ENST00000486934 GRIN3BO60391 1043 aa8.78□□□□□ -1
TRA2A-207ENST00000486934 EOMESO95936 686 aa8.78□□□□□ -1
TRA2A-207ENST00000486934 PWP1Q13610 501 aa8.78□□□□□ -1
TRA2A-207ENST00000486934 C9orf131Q5VYM1 1079 aa8.78□□□□□ -1
TRA2A-207ENST00000486934 FBXL18Q96ME1 805 aa8.78□□□□□ -1
TRA2A-207ENST00000486934 ZC3H7BQ9UGR2 993 aaKnown RBP8.78□□□□□ -1
TRA2A-207ENST00000486934 UPK3BL1B0FP48 263 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 UPK3BL2E5RIL1 263 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 CAP2P40123 477 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 PRAMEF13Q5VWM6 474 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 REC114Q7Z4M0 266 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 WFDC3Q8IUB2 231 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 LRRC4CQ9HCJ2 640 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 PRDM10Q9NQV6 1147 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 METTL5Q9NRN9 209 aaKnown RBP8.77□□□□□ -1.01
TRA2A-207ENST00000486934 TACC3Q9Y6A5 838 aa8.77□□□□□ -1.01
TRA2A-207ENST00000486934 PRNPP04156 253 aa8.76□□□□□ -1.01
TRA2A-207ENST00000486934 PGRP06401 933 aa8.76□□□□□ -1.01
TRA2A-207ENST00000486934 ITGAEP38570 1179 aa8.76□□□□□ -1.01
TRA2A-207ENST00000486934 VSIG10LQ86VR7 867 aa8.76□□□□□ -1.01
TRA2A-207ENST00000486934 HID1Q8IV36 788 aa8.76□□□□□ -1.01
TRA2A-207ENST00000486934 LRRC3Q9BY71 257 aa8.76□□□□□ -1.01
TRA2A-207ENST00000486934 FOXQ1Q9C009 403 aa8.76□□□□□ -1.01
TRA2A-207ENST00000486934 PRR36Q9H6K5 1346 aa8.76□□□□□ -1.01
TRA2A-207ENST00000486934 SCAMP3O14828 347 aaKnown RBP8.75□□□□□ -1.01
TRA2A-207ENST00000486934 CYP26A1O43174 497 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 LRIG2O94898 1065 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 CST3P01034 146 aaPredicted RBP8.75□□□□□ -1.01
TRA2A-207ENST00000486934 ITGB5P18084 799 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 MPP2Q14168 576 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 CDC37L1Q7L3B6 337 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 XAGE3Q8WTP9 111 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 RNF34Q969K3 372 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 TMEM87BQ96K49 555 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 METTL22Q9BUU2 404 aaPredicted RBP8.75□□□□□ -1.01
TRA2A-207ENST00000486934 KRTAP4-2Q9BYR5 136 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 BRMS1Q9HCU9 246 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 DDX41Q9UJV9 622 aaKnown RBP8.75□□□□□ -1.01
TRA2A-207ENST00000486934 PLAGL2Q9UPG8 496 aa8.75□□□□□ -1.01
TRA2A-207ENST00000486934 JUNBP17275 347 aaPredicted RBP8.74□□□□□ -1.01
TRA2A-207ENST00000486934 OXCT1P55809 520 aa8.74□□□□□ -1.01
TRA2A-207ENST00000486934 CPSF6Q16630 551 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRA2A-207ENST00000486934 USP48Q86UV5 1035 aa8.74□□□□□ -1.01
TRA2A-207ENST00000486934 MRPL41Q8IXM3 137 aaKnown RBP8.74□□□□□ -1.01
TRA2A-207ENST00000486934 PLD6Q8N2A8 252 aaKnown RBP8.74□□□□□ -1.01
TRA2A-207ENST00000486934 SUPT16HQ9Y5B9 1047 aaKnown RBP8.74□□□□□ -1.01
TRA2A-207ENST00000486934 HTR3BO95264 441 aa8.73□□□□□ -1.01
TRA2A-207ENST00000486934 RAD51AP2Q09MP3 1159 aa8.73□□□□□ -1.01
TRA2A-207ENST00000486934 TMEM201Q5SNT2 666 aa8.73□□□□□ -1.01
TRA2A-207ENST00000486934 DUSP27Q5VZP5 1158 aa8.73□□□□□ -1.01
TRA2A-207ENST00000486934 MCATQ8IVS2 390 aaKnown RBP8.73□□□□□ -1.01
TRA2A-207ENST00000486934 KCT2Q8NC54 265 aa8.73□□□□□ -1.01
TRA2A-207ENST00000486934 PPP1R13LQ8WUF5 828 aa8.73□□□□□ -1.01
TRA2A-207ENST00000486934 MIPEPQ99797 713 aa8.73□□□□□ -1.01
TRA2A-207ENST00000486934 REV1Q9UBZ9 1251 aa8.73□□□□□ -1.01
TRA2A-207ENST00000486934 PRR33A8MZF0 331 aa8.72□□□□□ -1.01
TRA2A-207ENST00000486934 CHURC1-FNTBB4DL54 471 aa8.72□□□□□ -1.01
TRA2A-207ENST00000486934 BPNT1O95861 308 aa8.72□□□□□ -1.01
TRA2A-207ENST00000486934 PLCG1P19174 1290 aa8.72□□□□□ -1.01
TRA2A-207ENST00000486934 CYP27A1Q02318 531 aa8.72□□□□□ -1.01
TRA2A-207ENST00000486934 CLCQ05315 142 aa8.72□□□□□ -1.01
TRA2A-207ENST00000486934 ADAM30Q9UKF2 790 aa8.72□□□□□ -1.01
TRA2A-207ENST00000486934 SEZ6Q53EL9 994 aa8.71□□□□□ -1.02
TRA2A-207ENST00000486934 LCE4AQ5TA78 99 aa8.71□□□□□ -1.02
TRA2A-207ENST00000486934 NT5DC4Q86YG4 428 aa8.71□□□□□ -1.02
TRA2A-207ENST00000486934 DNAJB8Q8NHS0 232 aa8.71□□□□□ -1.02
TRA2A-207ENST00000486934 SPON2Q9BUD6 331 aa8.71□□□□□ -1.02
TRA2A-207ENST00000486934 NT5C1AQ9BXI3 368 aa8.71□□□□□ -1.02
TRA2A-207ENST00000486934 BSDC1Q9NW68 430 aaPredicted RBP8.71□□□□□ -1.02
TRA2A-207ENST00000486934 CYP27C1Q4G0S4 372 aa8.7□□□□□ -1.02
TRA2A-207ENST00000486934 KIAA0825Q8IV33 1275 aa8.7□□□□□ -1.02
TRA2A-207ENST00000486934 FLCNQ8NFG4 579 aa8.7□□□□□ -1.02
TRA2A-207ENST00000486934 ANTXR1Q9H6X2 564 aa8.7□□□□□ -1.02
TRA2A-207ENST00000486934 PCDHB14Q9Y5E9 798 aa8.7□□□□□ -1.02
TRA2A-207ENST00000486934 CD96P40200 585 aa8.69□□□□□ -1.02
TRA2A-207ENST00000486934 RBM25P49756 843 aaKnown RBP8.69□□□□□ -1.02
TRA2A-207ENST00000486934 NKPD1Q17RQ9 610 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms