RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 IL1RAPL2Q9NP60 686 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 ATP8A2Q9NTI2 1148 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 SWAP70Q9UH65 585 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 PTCH2Q9Y6C5 1203 aa9.03□□□□□ -0.96
CPNE1-226ENST00000486021 DDX60LQ5H9U9 1706 aaKnown RBP9.02□□□□□ -0.96
CPNE1-226ENST00000486021 BAZ2AQ9UIF9 1905 aaKnown RBP9.02□□□□□ -0.97
CPNE1-226ENST00000486021 APBB1O00213 710 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 ERC2O15083 957 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 BCRP11274 1271 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 ATP5JP18859 108 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 HOXA7P31268 230 aaPredicted RBP9.02□□□□□ -0.97
CPNE1-226ENST00000486021 HMGCS2P54868 508 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 IRF5Q13568 498 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 GPAT2Q6NUI2 795 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 PAG1Q9NWQ8 432 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 PALD1Q9ULE6 856 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 SIPA1L1O43166 1804 aa9.02□□□□□ -0.97
CPNE1-226ENST00000486021 ZFYP08048 801 aaPredicted RBP9.01□□□□□ -0.97
CPNE1-226ENST00000486021 CYP2C8P10632 490 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 MAPK4P31152 587 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 ABCB5Q2M3G0 1257 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 DOCK3Q8IZD9 2030 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 ANKRD13CQ8N6S4 541 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 MIGA1Q8NAN2 632 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 ZNF384Q8TF68 577 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 SOCS4Q8WXH5 440 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 CCDC17Q96LX7 622 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 ARHGEF10LQ9HCE6 1279 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 PIH1D3Q9NQM4 214 aaKnown RBP9.01□□□□□ -0.97
CPNE1-226ENST00000486021 MCM9Q9NXL9 1143 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.01□□□□□ -0.97
CPNE1-226ENST00000486021 ADGRA2Q96PE1 1338 aa9.01□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L15C9J2P7 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L13C9JLJ4 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L11C9JVI0 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L18D6R9N7 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L22D6RA61 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L17D6RBQ6 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L19D6RCP7 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L20D6RJB6 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 GOLIM4O00461 696 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 ADCY3O60266 1144 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 GNAT2P19087 354 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 USP17L24Q0WX57 530 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 MTMR2Q13614 643 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 MOGSQ13724 837 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 RAB3GAP1Q15042 981 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 UBE3CQ15386 1083 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 TATDN1Q6P1N9 297 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 GPRC5AQ8NFJ5 357 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 HAUS7Q99871 368 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 NUDT12Q9BQG2 462 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 RNF208Q9H0X6 261 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 BCL11AQ9H165 835 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 ASCC2Q9H1I8 757 aaPredicted RBP9□□□□□ -0.97
CPNE1-226ENST00000486021 SLC5A4Q9NY91 659 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 TLR7Q9NYK1 1049 aaKnown RBP9□□□□□ -0.97
CPNE1-226ENST00000486021 SAP30BPQ9UHR5 308 aaKnown RBP9□□□□□ -0.97
CPNE1-226ENST00000486021 ZBTB21Q9ULJ3 1066 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 IVNS1ABPQ9Y6Y0 642 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 ZSWIM8A7E2V4 1837 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 ZNF532Q9HCE3 1301 aa9□□□□□ -0.97
CPNE1-226ENST00000486021 FAM196BA6NMK8 535 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 MPHOSPH10O00566 681 aaKnown RBP8.99□□□□□ -0.97
CPNE1-226ENST00000486021 GJB1P08034 283 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 PDE6AP16499 860 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 DYNLL1P63167 89 aaKnown RBP8.99□□□□□ -0.97
CPNE1-226ENST00000486021 PPP4R3BQ5MIZ7 849 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 TMEM179Q6ZVK1 233 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 SH3TC2Q8TF17 1288 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 BOLA2Q9H3K6 86 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 ECHDC1Q9NTX5 307 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 HOXC10Q9NYD6 342 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 MORF4L1Q9UBU8 362 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 NR2E3Q9Y5X4 410 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 MYH4Q9Y623 1939 aa8.99□□□□□ -0.97
CPNE1-226ENST00000486021 ZNFX1Q9P2E3 1918 aaKnown RBP8.98□□□□□ -0.97
CPNE1-226ENST00000486021 POTEFA5A3E0 1075 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 GDF11O95390 407 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 GH2P01242 217 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 TFRCP02786 760 aaKnown RBP8.98□□□□□ -0.97
CPNE1-226ENST00000486021 HMGCRP04035 888 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 SLC3A2P08195 630 aaKnown RBP8.98□□□□□ -0.97
CPNE1-226ENST00000486021 ADD2P35612 726 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 GJA8P48165 433 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 FLT3LGP49771 235 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 HERVK_113P62684 666 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 PRKCZQ05513 592 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 GIMAP6Q6P9H5 292 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 ADGRA1Q86SQ6 560 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 ANKLE1Q8NAG6 615 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 LPAR1Q92633 364 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 C12orf42Q96LP6 360 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 RIOK1Q9BRS2 568 aaKnown RBP8.98□□□□□ -0.97
CPNE1-226ENST00000486021 NACAP1Q9BZK3 213 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 ARHGAP39Q9C0H5 1083 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 KIAA1683Q9H0B3 1180 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 ANTXR1Q9H6X2 564 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 DCTPP1Q9H773 170 aa8.98□□□□□ -0.97
CPNE1-226ENST00000486021 HMX1Q9NP08 348 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms