RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 EHD4Q9H223 541 aa19.26■□□□□ 0.67
SIK3-211ENST00000485363 ZBTB21Q9ULJ3 1066 aa19.26■□□□□ 0.67
SIK3-211ENST00000485363 C19orf81C9J6K1 198 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 ATP5JP18859 108 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 EN2P19622 333 aaPredicted RBP19.25■□□□□ 0.67
SIK3-211ENST00000485363 BACE1P56817 501 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 JAG1P78504 1218 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 MTMR2Q13614 643 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 ANKRD13CQ8N6S4 541 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 BOLA2Q9H3K6 86 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 PAG1Q9NWQ8 432 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 TMOD4Q9NZQ9 345 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 SERPINB13Q9UIV8 391 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 ZNF532Q9HCE3 1301 aa19.25■□□□□ 0.67
SIK3-211ENST00000485363 MKI67P46013 3256 aaKnown RBP19.24■□□□□ 0.67
SIK3-211ENST00000485363 USP17L10C9JJH3 530 aa19.24■□□□□ 0.67
SIK3-211ENST00000485363 MYCP01106 439 aaPredicted RBP19.24■□□□□ 0.67
SIK3-211ENST00000485363 GRK4P32298 578 aa19.24■□□□□ 0.67
SIK3-211ENST00000485363 GCLCP48506 637 aaPredicted RBP19.24■□□□□ 0.67
SIK3-211ENST00000485363 PRKCZQ05513 592 aa19.24■□□□□ 0.67
SIK3-211ENST00000485363 FAM110CQ1W6H9 321 aa19.24■□□□□ 0.67
SIK3-211ENST00000485363 TATDN1Q6P1N9 297 aa19.24■□□□□ 0.67
SIK3-211ENST00000485363 CRNKL1Q9BZJ0 848 aaKnown RBP19.24■□□□□ 0.67
SIK3-211ENST00000485363 NAV1Q8NEY1 1877 aa19.24■□□□□ 0.67
SIK3-211ENST00000485363 TCRBV5S4A2TA0A5A2 114 aa19.23■□□□□ 0.67
SIK3-211ENST00000485363 TNPO2O14787 897 aaKnown RBP19.23■□□□□ 0.67
SIK3-211ENST00000485363 SHROOM1Q2M3G4 852 aaPredicted RBP19.23■□□□□ 0.67
SIK3-211ENST00000485363 PRPF38BQ5VTL8 546 aaKnown RBP19.23■□□□□ 0.67
SIK3-211ENST00000485363 EDC3Q96F86 508 aaKnown RBP19.23■□□□□ 0.67
SIK3-211ENST00000485363 ASCC2Q9H1I8 757 aaPredicted RBP19.23■□□□□ 0.67
SIK3-211ENST00000485363 DDX60LQ5H9U9 1706 aaKnown RBP19.22■□□□□ 0.67
SIK3-211ENST00000485363 GH2P01242 217 aa19.22■□□□□ 0.67
SIK3-211ENST00000485363 POLR3DP05423 398 aaPredicted RBP19.22■□□□□ 0.67
SIK3-211ENST00000485363 HAUS7Q99871 368 aa19.22■□□□□ 0.67
SIK3-211ENST00000485363 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.22■□□□□ 0.67
SIK3-211ENST00000485363 GABRQQ9UN88 632 aa19.22■□□□□ 0.67
SIK3-211ENST00000485363 ADD2P35612 726 aa19.21■□□□□ 0.67
SIK3-211ENST00000485363 PLCD1P51178 756 aa19.21■□□□□ 0.67
SIK3-211ENST00000485363 IRX3P78415 501 aaPredicted RBP19.21■□□□□ 0.67
SIK3-211ENST00000485363 SLAIN1Q8ND83 568 aa19.21■□□□□ 0.67
SIK3-211ENST00000485363 COA7Q96BR5 231 aa19.21■□□□□ 0.67
SIK3-211ENST00000485363 MCM9Q9NXL9 1143 aa19.21■□□□□ 0.67
SIK3-211ENST00000485363 BIN2Q9UBW5 565 aaPredicted RBP19.21■□□□□ 0.67
SIK3-211ENST00000485363 MYH7P12883 1935 aa19.2■□□□□ 0.66
SIK3-211ENST00000485363 SMARCA5O60264 1052 aaPredicted RBP19.2■□□□□ 0.66
SIK3-211ENST00000485363 HOXA7P31268 230 aaPredicted RBP19.2■□□□□ 0.66
SIK3-211ENST00000485363 FLT3LGP49771 235 aa19.2■□□□□ 0.66
SIK3-211ENST00000485363 UBXN2AP68543 259 aa19.2■□□□□ 0.66
SIK3-211ENST00000485363 CERKLQ49MI3 558 aaPredicted RBP19.2■□□□□ 0.66
SIK3-211ENST00000485363 LCORLQ8N3X6 602 aa19.2■□□□□ 0.66
SIK3-211ENST00000485363 DCTPP1Q9H773 170 aa19.2■□□□□ 0.66
SIK3-211ENST00000485363 DOCK3Q8IZD9 2030 aa19.2■□□□□ 0.66
SIK3-211ENST00000485363 IRF5Q13568 498 aa19.19■□□□□ 0.66
SIK3-211ENST00000485363 ABCB5Q2M3G0 1257 aa19.19■□□□□ 0.66
SIK3-211ENST00000485363 USP17L2Q6R6M4 530 aa19.19■□□□□ 0.66
SIK3-211ENST00000485363 SDR42E1Q8WUS8 393 aa19.19■□□□□ 0.66
SIK3-211ENST00000485363 CABP5Q9NP86 173 aa19.19■□□□□ 0.66
SIK3-211ENST00000485363 ADCY3O60266 1144 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 SHMT1P34896 483 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 RAB3GAP1Q15042 981 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 MTFR1Q15390 333 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 ZSCAN25Q6NSZ9 544 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 PXYLP1Q8TE99 480 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 FEZ1Q99689 392 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 ARMT1Q9H993 441 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 DCP1AQ9NPI6 582 aaPredicted RBP19.18■□□□□ 0.66
SIK3-211ENST00000485363 EMILIN3Q9NT22 766 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 ECHDC1Q9NTX5 307 aa19.18■□□□□ 0.66
SIK3-211ENST00000485363 MBD4O95243 580 aa19.17■□□□□ 0.66
SIK3-211ENST00000485363 GABPAQ06546 454 aa19.17■□□□□ 0.66
SIK3-211ENST00000485363 UBE3CQ15386 1083 aa19.17■□□□□ 0.66
SIK3-211ENST00000485363 NKX2-3Q8TAU0 364 aa19.17■□□□□ 0.66
SIK3-211ENST00000485363 GPATCH3Q96I76 525 aa19.17■□□□□ 0.66
SIK3-211ENST00000485363 P2RX7Q99572 595 aaKnown RBP19.17■□□□□ 0.66
SIK3-211ENST00000485363 MORF4L1Q9UBU8 362 aa19.17■□□□□ 0.66
SIK3-211ENST00000485363 CCL5P13501 91 aa19.16■□□□□ 0.66
SIK3-211ENST00000485363 USP14P54578 494 aa19.16■□□□□ 0.66
SIK3-211ENST00000485363 HERVK_113P62684 666 aa19.16■□□□□ 0.66
SIK3-211ENST00000485363 SLFNL1Q499Z3 407 aa19.16■□□□□ 0.66
SIK3-211ENST00000485363 GTF3C2Q8WUA4 911 aaPredicted RBP19.16■□□□□ 0.66
SIK3-211ENST00000485363 C12orf42Q96LP6 360 aa19.16■□□□□ 0.66
SIK3-211ENST00000485363 RNF208Q9H0X6 261 aa19.16■□□□□ 0.66
SIK3-211ENST00000485363 ATP8A2Q9NTI2 1148 aa19.16■□□□□ 0.66
SIK3-211ENST00000485363 TAOK2Q9UL54 1235 aa19.16■□□□□ 0.66
SIK3-211ENST00000485363 GJB1P08034 283 aa19.15■□□□□ 0.66
SIK3-211ENST00000485363 ELNP15502 786 aa19.15■□□□□ 0.66
SIK3-211ENST00000485363 ZYXQ15942 572 aaKnown RBP19.15■□□□□ 0.66
SIK3-211ENST00000485363 GPRC5AQ8NFJ5 357 aa19.15■□□□□ 0.66
SIK3-211ENST00000485363 KIAA1683Q9H0B3 1180 aa19.15■□□□□ 0.66
SIK3-211ENST00000485363 MYH8P13535 1937 aa19.15■□□□□ 0.66
SIK3-211ENST00000485363 BAZ2AQ9UIF9 1905 aaKnown RBP19.15■□□□□ 0.66
SIK3-211ENST00000485363 MPHOSPH10O00566 681 aaKnown RBP19.14■□□□□ 0.65
SIK3-211ENST00000485363 PRKAB2O43741 272 aa19.14■□□□□ 0.65
SIK3-211ENST00000485363 GJA8P48165 433 aa19.14■□□□□ 0.65
SIK3-211ENST00000485363 RRP1P56182 461 aaKnown RBP19.14■□□□□ 0.65
SIK3-211ENST00000485363 AMOTL1Q8IY63 956 aa19.14■□□□□ 0.65
SIK3-211ENST00000485363 DDRGK1Q96HY6 314 aa19.14■□□□□ 0.65
SIK3-211ENST00000485363 SWAP70Q9UH65 585 aa19.14■□□□□ 0.65
SIK3-211ENST00000485363 USP17L15C9J2P7 530 aa19.13■□□□□ 0.65
SIK3-211ENST00000485363 USP17L13C9JLJ4 530 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms