RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 ZNF444Q8N0Y2 327 aaPredicted RBP5.42□□□□□ -1.54
SHANK2-216ENST00000482659 JMYQ8N9B5 988 aa5.42□□□□□ -1.54
SHANK2-216ENST00000482659 ZKSCAN4Q969J2 545 aaPredicted RBP5.42□□□□□ -1.54
SHANK2-216ENST00000482659 OPTNQ96CV9 577 aa5.42□□□□□ -1.54
SHANK2-216ENST00000482659 DSCC1Q9BVC3 393 aa5.42□□□□□ -1.54
SHANK2-216ENST00000482659 RNF41Q9H4P4 317 aaPredicted RBP5.42□□□□□ -1.54
SHANK2-216ENST00000482659 MKNK2Q9HBH9 465 aa5.42□□□□□ -1.54
SHANK2-216ENST00000482659 SAP30BPQ9UHR5 308 aaKnown RBP5.42□□□□□ -1.54
SHANK2-216ENST00000482659 ZHX2Q9Y6X8 837 aa5.42□□□□□ -1.54
SHANK2-216ENST00000482659 CCDC171Q6TFL3 1326 aa5.42□□□□□ -1.54
SHANK2-216ENST00000482659 TESPA1A2RU30 521 aaPredicted RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 USP17L5A8MUK1 530 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 MINDY4BA8MYZ0 360 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 FAM155AB1AL88 458 aaPredicted RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 C19orf81C9J6K1 198 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 M0R2C6 588 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 HSPD1P10809 573 aaKnown RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 PTPRAP18433 802 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 CHMLP26374 656 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 INPP5BP32019 993 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 TM4SF4P48230 202 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 HTRA3P83110 453 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 KIF23Q02241 960 aaPredicted RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 GABPAQ06546 454 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 NMIQ13287 307 aaPredicted RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 PABPC4Q13310 644 aaKnown RBP eCLIP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 PPIL2Q13356 520 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 IMMTQ16891 758 aaKnown RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 ABCB5Q2M3G0 1257 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 SLFNL1Q499Z3 407 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 TMEM179Q6ZVK1 233 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 RASAL3Q86YV0 1011 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 HS6ST3Q8IZP7 471 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 ZNF280CQ8ND82 737 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 SP7Q8TDD2 431 aaPredicted RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 OTUD5Q96G74 571 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 WNK4Q96J92 1243 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 FAM227BQ96M60 508 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 SEC62Q99442 399 aaKnown RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 WDR18Q9BV38 432 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 SH2D4AQ9H788 454 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 KANSL2Q9H9L4 492 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 ELP3Q9H9T3 547 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 ZCCHC17Q9NP64 241 aaKnown RBP5.41□□□□□ -1.54
SHANK2-216ENST00000482659 SAGE1Q9NXZ1 904 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 ANAPC4Q9UJX5 808 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 SYNPO2Q9UMS6 1093 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 TRPC6Q9Y210 931 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 SNCAIPQ9Y6H5 919 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 SCN4AP35499 1836 aa5.41□□□□□ -1.54
SHANK2-216ENST00000482659 TIAM2Q8IVF5 1701 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 A0A0D9SFI3 127 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 USP17L10C9JJH3 530 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 MPHOSPH10O00566 681 aaKnown RBP5.4□□□□□ -1.54
SHANK2-216ENST00000482659 SGSM2O43147 1006 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 EPB41L2O43491 1005 aaKnown RBP5.4□□□□□ -1.54
SHANK2-216ENST00000482659 CDC45O75419 566 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 FGAP02671 866 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 CHGBP05060 677 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 CDK8P49336 464 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 PPARAQ07869 468 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 RNF20Q5VTR2 975 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 C16orf86Q6ZW13 317 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 CLMNQ96JQ2 1002 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 ARHGEF10LQ9HCE6 1279 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 WBP1LQ9NX94 342 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 TMOD4Q9NZQ9 345 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 ZBTB21Q9ULJ3 1066 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 KCNH4Q9UQ05 1017 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 AFG3L2Q9Y4W6 797 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 STK24Q9Y6E0 443 aa5.4□□□□□ -1.54
SHANK2-216ENST00000482659 ZMYM6O95789 1325 aa5.4□□□□□ -1.55
SHANK2-216ENST00000482659 MYH3P11055 1940 aa5.4□□□□□ -1.55
SHANK2-216ENST00000482659 GOLGB1Q14789 3259 aaKnown RBP5.4□□□□□ -1.55
SHANK2-216ENST00000482659 UTRNP46939 3433 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 IRF6O14896 467 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 AOC2O75106 756 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 REC8O95072 547 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 GH2P01242 217 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 TSPY3P0CV98 308 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 TSPY8P0CW00 308 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 SHMT1P34896 483 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 TIE1P35590 1138 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 USP14P54578 494 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 BACE1P56817 501 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 TRDNQ13061 729 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 SPP2Q13103 211 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 RAB3GAP1Q15042 981 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 ARHGEF6Q15052 776 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 SLC4A8Q2Y0W8 1093 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 CCDC178Q5BJE1 867 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 NOM1Q5C9Z4 860 aaKnown RBP5.39□□□□□ -1.55
SHANK2-216ENST00000482659 USP17L2Q6R6M4 530 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 CCDC129Q6ZRS4 1044 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 MFSD6Q6ZSS7 791 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 ANKRD23Q86SG2 305 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 PROCA1Q8NCQ7 364 aaPredicted RBP5.39□□□□□ -1.55
SHANK2-216ENST00000482659 LPAR1Q92633 364 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 ESR2Q92731 530 aa5.39□□□□□ -1.55
SHANK2-216ENST00000482659 MS4A4AQ96JQ5 239 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms