RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 WIPI1Q5MNZ9 446 aaPredicted RBP6.73□□□□□ -1.33
CMSS1-204ENST00000479555 SFRP5Q5T4F7 317 aa6.73□□□□□ -1.33
CMSS1-204ENST00000479555 FAM53CQ9NYF3 392 aa6.73□□□□□ -1.33
CMSS1-204ENST00000479555 PPM1HQ9ULR3 514 aa6.73□□□□□ -1.33
CMSS1-204ENST00000479555 ST14Q9Y5Y6 855 aa6.73□□□□□ -1.33
CMSS1-204ENST00000479555 CAPN6Q9Y6Q1 641 aa6.73□□□□□ -1.33
CMSS1-204ENST00000479555 WASH4PA8MWX3 477 aa6.72□□□□□ -1.33
CMSS1-204ENST00000479555 USP17L7P0C7H9 530 aa6.72□□□□□ -1.33
CMSS1-204ENST00000479555 C1QTNF9P0C862 333 aa6.72□□□□□ -1.33
CMSS1-204ENST00000479555 ETF1P62495 437 aaKnown RBP6.72□□□□□ -1.33
CMSS1-204ENST00000479555 FMR1Q06787 632 aaKnown RBP eCLIP6.72□□□□□ -1.33
CMSS1-204ENST00000479555 TMEM67Q5HYA8 995 aa6.72□□□□□ -1.33
CMSS1-204ENST00000479555 HOMEZQ8IX15 550 aa6.72□□□□□ -1.33
CMSS1-204ENST00000479555 LRRC56Q8IYG6 542 aaPredicted RBP6.72□□□□□ -1.33
CMSS1-204ENST00000479555 KCT2Q8NC54 265 aa6.72□□□□□ -1.33
CMSS1-204ENST00000479555 DPH2Q9BQC3 489 aaPredicted RBP6.72□□□□□ -1.33
CMSS1-204ENST00000479555 NSUN3Q9H649 340 aaKnown RBP6.72□□□□□ -1.33
CMSS1-204ENST00000479555 LMCD1Q9NZU5 365 aa6.72□□□□□ -1.33
CMSS1-204ENST00000479555 TSPAN15O95858 294 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 ERVFC1P60507 584 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 PRAMEF13Q5VWM6 474 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 LETMD1Q6P1Q0 360 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 UBE2FQ969M7 185 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 WNT10AQ9GZT5 417 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 SLAMF8Q9P0V8 285 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 ZSWIM5Q9P217 1185 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 CYP8B1Q9UNU6 501 aa6.71□□□□□ -1.34
CMSS1-204ENST00000479555 GNEQ9Y223 722 aaKnown RBP6.71□□□□□ -1.34
CMSS1-204ENST00000479555 GRK4P32298 578 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 SEPT6Q14141 434 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 RALGPS1Q5JS13 557 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 HDXQ7Z353 690 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 CDH24Q86UP0 819 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 FBF1Q8TES7 1133 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 TOX2Q96NM4 488 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 C12orf49Q9H741 205 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 TTF2Q9UNY4 1162 aaKnown RBP6.7□□□□□ -1.34
CMSS1-204ENST00000479555 PCDHB5Q9Y5E4 795 aa6.7□□□□□ -1.34
CMSS1-204ENST00000479555 DNAJC25-GNG10A0A024R161 153 aa6.69□□□□□ -1.34
CMSS1-204ENST00000479555 GDNFP39905 211 aa6.69□□□□□ -1.34
CMSS1-204ENST00000479555 NPAS4Q8IUM7 802 aa6.69□□□□□ -1.34
CMSS1-204ENST00000479555 SRCIN1Q9C0H9 1055 aa6.69□□□□□ -1.34
CMSS1-204ENST00000479555 ZSCAN22P10073 491 aaPredicted RBP6.68□□□□□ -1.34
CMSS1-204ENST00000479555 TNK2Q07912 1038 aa6.68□□□□□ -1.34
CMSS1-204ENST00000479555 TTBK2Q6IQ55 1244 aa6.68□□□□□ -1.34
CMSS1-204ENST00000479555 C22orf34Q6ZV56 151 aa6.68□□□□□ -1.34
CMSS1-204ENST00000479555 TTC6Q86TZ1 520 aa6.68□□□□□ -1.34
CMSS1-204ENST00000479555 BHLHE22Q8NFJ8 381 aaPredicted RBP6.68□□□□□ -1.34
CMSS1-204ENST00000479555 ALPK1Q96QP1 1244 aa6.68□□□□□ -1.34
CMSS1-204ENST00000479555 RNF19AQ9NV58 838 aa6.68□□□□□ -1.34
CMSS1-204ENST00000479555 P4HBP07237 508 aaKnown RBP6.67□□□□□ -1.34
CMSS1-204ENST00000479555 TRHRP34981 398 aaPredicted RBP6.67□□□□□ -1.34
CMSS1-204ENST00000479555 HK2P52789 917 aa6.67□□□□□ -1.34
CMSS1-204ENST00000479555 MAP3K11Q16584 847 aa6.67□□□□□ -1.34
CMSS1-204ENST00000479555 ALG1LQ6GMV1 187 aa6.67□□□□□ -1.34
CMSS1-204ENST00000479555 ANKLE2Q86XL3 938 aa6.67□□□□□ -1.34
CMSS1-204ENST00000479555 HID1Q8IV36 788 aa6.67□□□□□ -1.34
CMSS1-204ENST00000479555 MFSD2AQ8NA29 543 aa6.67□□□□□ -1.34
CMSS1-204ENST00000479555 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
CMSS1-204ENST00000479555 FAM8A1Q9UBU6 413 aa6.67□□□□□ -1.34
CMSS1-204ENST00000479555 NPIPB6E9PJ23 425 aa6.66□□□□□ -1.34
CMSS1-204ENST00000479555 CST3P01034 146 aaPredicted RBP6.66□□□□□ -1.34
CMSS1-204ENST00000479555 ESR1P03372 595 aa6.66□□□□□ -1.34
CMSS1-204ENST00000479555 KRTAP5-3Q6L8H2 238 aa6.66□□□□□ -1.34
CMSS1-204ENST00000479555 FBXO15Q8NCQ5 510 aaPredicted RBP6.66□□□□□ -1.34
CMSS1-204ENST00000479555 SPG7Q9UQ90 795 aa6.66□□□□□ -1.34
CMSS1-204ENST00000479555 CAP2P40123 477 aa6.65□□□□□ -1.34
CMSS1-204ENST00000479555 ABHD4Q8TB40 342 aa6.65□□□□□ -1.34
CMSS1-204ENST00000479555 ZSCAN18Q8TBC5 510 aaPredicted RBP6.65□□□□□ -1.34
CMSS1-204ENST00000479555 ANKRD24Q8TF21 1146 aa6.65□□□□□ -1.34
CMSS1-204ENST00000479555 ASB16Q96NS5 453 aa6.65□□□□□ -1.34
CMSS1-204ENST00000479555 DCP1AQ9NPI6 582 aaPredicted RBP6.65□□□□□ -1.34
CMSS1-204ENST00000479555 TJP2Q9UDY2 1190 aa6.65□□□□□ -1.34
CMSS1-204ENST00000479555 IVNS1ABPQ9Y6Y0 642 aa6.65□□□□□ -1.34
CMSS1-204ENST00000479555 NFIBO00712 420 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 GIPC1O14908 333 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 ATP2B2Q01814 1243 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 SCARA3Q6AZY7 606 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 SV2BQ7L1I2 683 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 THAP5Q7Z6K1 395 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 CREG2Q8IUH2 290 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 ZSCAN29Q8IWY8 852 aaPredicted RBP6.64□□□□□ -1.35
CMSS1-204ENST00000479555 Q96M66 194 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 ADAMTS10Q9H324 1103 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 SNCAIPQ9Y6H5 919 aa6.64□□□□□ -1.35
CMSS1-204ENST00000479555 GFRA2O00451 464 aa6.63□□□□□ -1.35
CMSS1-204ENST00000479555 BRD1O95696 1058 aa6.63□□□□□ -1.35
CMSS1-204ENST00000479555 PGRP06401 933 aa6.63□□□□□ -1.35
CMSS1-204ENST00000479555 LDHBP07195 334 aaKnown RBP6.63□□□□□ -1.35
CMSS1-204ENST00000479555 CCDC85BQ15834 202 aaPredicted RBP6.63□□□□□ -1.35
CMSS1-204ENST00000479555 TTBK1Q5TCY1 1321 aaPredicted RBP6.63□□□□□ -1.35
CMSS1-204ENST00000479555 ATG14Q6ZNE5 492 aa6.63□□□□□ -1.35
CMSS1-204ENST00000479555 EPB41L4BQ9H329 900 aa6.63□□□□□ -1.35
CMSS1-204ENST00000479555 ETV2O00321 342 aaPredicted RBP6.62□□□□□ -1.35
CMSS1-204ENST00000479555 PDE4CQ08493 712 aa6.62□□□□□ -1.35
CMSS1-204ENST00000479555 LILRA6Q6PI73 481 aa6.62□□□□□ -1.35
CMSS1-204ENST00000479555 C19orf44Q9H6X5 657 aa6.62□□□□□ -1.35
CMSS1-204ENST00000479555 TMEM59LQ9UK28 342 aa6.62□□□□□ -1.35
CMSS1-204ENST00000479555 TMEM253P0C7T8 217 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms