RNA–Protein interactions for RNA: ENST00000476535.1

LCLAT1-208, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 4

Gene LCLAT1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-208ENST00000476535 DOCK3Q8IZD9 2030 aa21.39■■□□□ 1.01
LCLAT1-208ENST00000476535 MYPNQ86TC9 1320 aa21.38■■□□□ 1.01
LCLAT1-208ENST00000476535 TCRBV5S4A2TA0A5A2 114 aa21.38■■□□□ 1.01
LCLAT1-208ENST00000476535 BACE1P56817 501 aa21.38■■□□□ 1.01
LCLAT1-208ENST00000476535 JAG1P78504 1218 aa21.38■■□□□ 1.01
LCLAT1-208ENST00000476535 TATDN1Q6P1N9 297 aa21.38■■□□□ 1.01
LCLAT1-208ENST00000476535 TTC6Q86TZ1 520 aa21.38■■□□□ 1.01
LCLAT1-208ENST00000476535 PAG1Q9NWQ8 432 aa21.38■■□□□ 1.01
LCLAT1-208ENST00000476535 ZNF532Q9HCE3 1301 aa21.37■■□□□ 1.01
LCLAT1-208ENST00000476535 C19orf81C9J6K1 198 aa21.37■■□□□ 1.01
LCLAT1-208ENST00000476535 GDF11O95390 407 aa21.37■■□□□ 1.01
LCLAT1-208ENST00000476535 FAM110CQ1W6H9 321 aa21.37■■□□□ 1.01
LCLAT1-208ENST00000476535 RAET1EQ8TD07 263 aa21.37■■□□□ 1.01
LCLAT1-208ENST00000476535 SH3TC2Q8TF17 1288 aa21.37■■□□□ 1.01
LCLAT1-208ENST00000476535 HAUS7Q99871 368 aa21.37■■□□□ 1.01
LCLAT1-208ENST00000476535 CRNKL1Q9BZJ0 848 aaKnown RBP21.37■■□□□ 1.01
LCLAT1-208ENST00000476535 ECM2O94769 699 aaPredicted RBP21.36■■□□□ 1.01
LCLAT1-208ENST00000476535 GCLCP48506 637 aaPredicted RBP21.36■■□□□ 1.01
LCLAT1-208ENST00000476535 MTMR2Q13614 643 aa21.36■■□□□ 1.01
LCLAT1-208ENST00000476535 SLC4A8Q2Y0W8 1093 aa21.36■■□□□ 1.01
LCLAT1-208ENST00000476535 EDC3Q96F86 508 aaKnown RBP21.36■■□□□ 1.01
LCLAT1-208ENST00000476535 BOLA2Q9H3K6 86 aa21.36■■□□□ 1.01
LCLAT1-208ENST00000476535 USP17L10C9JJH3 530 aa21.35■■□□□ 1.01
LCLAT1-208ENST00000476535 GRK4P32298 578 aa21.35■■□□□ 1.01
LCLAT1-208ENST00000476535 PRKCZQ05513 592 aa21.35■■□□□ 1.01
LCLAT1-208ENST00000476535 SHROOM1Q2M3G4 852 aaPredicted RBP21.35■■□□□ 1.01
LCLAT1-208ENST00000476535 ANKRD13CQ8N6S4 541 aa21.35■■□□□ 1.01
LCLAT1-208ENST00000476535 BCL11AQ9H165 835 aa21.35■■□□□ 1.01
LCLAT1-208ENST00000476535 ASCC2Q9H1I8 757 aaPredicted RBP21.35■■□□□ 1.01
LCLAT1-208ENST00000476535 TMOD4Q9NZQ9 345 aa21.35■■□□□ 1.01
LCLAT1-208ENST00000476535 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
LCLAT1-208ENST00000476535 HOXA7P31268 230 aaPredicted RBP21.34■■□□□ 1.01
LCLAT1-208ENST00000476535 ADD2P35612 726 aa21.34■■□□□ 1.01
LCLAT1-208ENST00000476535 PRPF38BQ5VTL8 546 aaKnown RBP21.34■■□□□ 1.01
LCLAT1-208ENST00000476535 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.34■■□□□ 1.01
LCLAT1-208ENST00000476535 DCTPP1Q9H773 170 aa21.34■■□□□ 1.01
LCLAT1-208ENST00000476535 GH2P01242 217 aa21.33■■□□□ 1.01
LCLAT1-208ENST00000476535 SLAIN1Q8ND83 568 aa21.33■■□□□ 1.01
LCLAT1-208ENST00000476535 TAOK2Q9UL54 1235 aa21.33■■□□□ 1.01
LCLAT1-208ENST00000476535 TNPO2O14787 897 aaKnown RBP21.32■■□□□ 1
LCLAT1-208ENST00000476535 SMARCA5O60264 1052 aaPredicted RBP21.32■■□□□ 1
LCLAT1-208ENST00000476535 POLR3DP05423 398 aaPredicted RBP21.32■■□□□ 1
LCLAT1-208ENST00000476535 PLCD1P51178 756 aa21.32■■□□□ 1
LCLAT1-208ENST00000476535 IRX3P78415 501 aaPredicted RBP21.32■■□□□ 1
LCLAT1-208ENST00000476535 GABPAQ06546 454 aa21.32■■□□□ 1
LCLAT1-208ENST00000476535 IRF5Q13568 498 aa21.32■■□□□ 1
LCLAT1-208ENST00000476535 CERKLQ49MI3 558 aaPredicted RBP21.32■■□□□ 1
LCLAT1-208ENST00000476535 LCORLQ8N3X6 602 aa21.32■■□□□ 1
LCLAT1-208ENST00000476535 DCP1AQ9NPI6 582 aaPredicted RBP21.32■■□□□ 1
LCLAT1-208ENST00000476535 GABRQQ9UN88 632 aa21.32■■□□□ 1
LCLAT1-208ENST00000476535 SHMT1P34896 483 aa21.31■■□□□ 1
LCLAT1-208ENST00000476535 UBE3CQ15386 1083 aa21.31■■□□□ 1
LCLAT1-208ENST00000476535 USP17L2Q6R6M4 530 aa21.31■■□□□ 1
LCLAT1-208ENST00000476535 MCM9Q9NXL9 1143 aa21.31■■□□□ 1
LCLAT1-208ENST00000476535 MORF4L1Q9UBU8 362 aa21.31■■□□□ 1
LCLAT1-208ENST00000476535 MYH8P13535 1937 aa21.31■■□□□ 1
LCLAT1-208ENST00000476535 BAZ2AQ9UIF9 1905 aaKnown RBP21.31■■□□□ 1
LCLAT1-208ENST00000476535 FLT3LGP49771 235 aa21.3■■□□□ 1
LCLAT1-208ENST00000476535 ABCB5Q2M3G0 1257 aa21.3■■□□□ 1
LCLAT1-208ENST00000476535 SDR42E1Q8WUS8 393 aa21.3■■□□□ 1
LCLAT1-208ENST00000476535 COA7Q96BR5 231 aa21.3■■□□□ 1
LCLAT1-208ENST00000476535 C12orf42Q96LP6 360 aa21.3■■□□□ 1
LCLAT1-208ENST00000476535 ATP8A2Q9NTI2 1148 aa21.3■■□□□ 1
LCLAT1-208ENST00000476535 ECHDC1Q9NTX5 307 aa21.3■■□□□ 1
LCLAT1-208ENST00000476535 MBD4O95243 580 aa21.29■■□□□ 1
LCLAT1-208ENST00000476535 MYCP01106 439 aaPredicted RBP21.29■■□□□ 1
LCLAT1-208ENST00000476535 UBXN2AP68543 259 aa21.29■■□□□ 1
LCLAT1-208ENST00000476535 MTFR1Q15390 333 aa21.29■■□□□ 1
LCLAT1-208ENST00000476535 ZSCAN25Q6NSZ9 544 aa21.29■■□□□ 1
LCLAT1-208ENST00000476535 PXYLP1Q8TE99 480 aa21.29■■□□□ 1
LCLAT1-208ENST00000476535 GTF3C2Q8WUA4 911 aaPredicted RBP21.29■■□□□ 1
LCLAT1-208ENST00000476535 ARMT1Q9H993 441 aa21.29■■□□□ 1
LCLAT1-208ENST00000476535 CABP5Q9NP86 173 aa21.29■■□□□ 1
LCLAT1-208ENST00000476535 EMILIN3Q9NT22 766 aa21.29■■□□□ 1
LCLAT1-208ENST00000476535 ADCY3O60266 1144 aa21.28■■□□□ 1
LCLAT1-208ENST00000476535 RRP1P56182 461 aaKnown RBP21.28■■□□□ 1
LCLAT1-208ENST00000476535 GPATCH3Q96I76 525 aa21.28■■□□□ 1
LCLAT1-208ENST00000476535 KIAA1683Q9H0B3 1180 aa21.28■■□□□ 1
LCLAT1-208ENST00000476535 USP14P54578 494 aa21.27■■□□□ 1
LCLAT1-208ENST00000476535 HERVK_113P62684 666 aa21.27■■□□□ 1
LCLAT1-208ENST00000476535 RAB3GAP1Q15042 981 aa21.27■■□□□ 1
LCLAT1-208ENST00000476535 SLFNL1Q499Z3 407 aa21.27■■□□□ 1
LCLAT1-208ENST00000476535 NKX2-3Q8TAU0 364 aa21.27■■□□□ 1
LCLAT1-208ENST00000476535 P2RX7Q99572 595 aaKnown RBP21.27■■□□□ 1
LCLAT1-208ENST00000476535 FEZ1Q99689 392 aa21.27■■□□□ 1
LCLAT1-208ENST00000476535 BIN2Q9UBW5 565 aaPredicted RBP21.27■■□□□ 1
LCLAT1-208ENST00000476535 GJB1P08034 283 aa21.26■□□□□ 0.99
LCLAT1-208ENST00000476535 CCL5P13501 91 aa21.26■□□□□ 0.99
LCLAT1-208ENST00000476535 GUCY1A2P33402 732 aa21.26■□□□□ 0.99
LCLAT1-208ENST00000476535 SWAP70Q9UH65 585 aa21.26■□□□□ 0.99
LCLAT1-208ENST00000476535 PCDHB15Q9Y5E8 787 aa21.26■□□□□ 0.99
LCLAT1-208ENST00000476535 PLXNB2O15031 1838 aa21.25■□□□□ 0.99
LCLAT1-208ENST00000476535 PRKAB2O43741 272 aa21.25■□□□□ 0.99
LCLAT1-208ENST00000476535 EVX2Q03828 476 aa21.25■□□□□ 0.99
LCLAT1-208ENST00000476535 CEP290O15078 2479 aa21.24■□□□□ 0.99
LCLAT1-208ENST00000476535 CHGBP05060 677 aa21.24■□□□□ 0.99
LCLAT1-208ENST00000476535 CYP2D6P10635 497 aa21.24■□□□□ 0.99
LCLAT1-208ENST00000476535 GJA8P48165 433 aa21.24■□□□□ 0.99
LCLAT1-208ENST00000476535 KBTBD3Q8NAB2 608 aa21.24■□□□□ 0.99
LCLAT1-208ENST00000476535 GPRC5AQ8NFJ5 357 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms