RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PALD1Q9ULE6 856 aa19.63■□□□□ 0.73
COL1A1-205ENST00000476387 PCDHB15Q9Y5E8 787 aa19.63■□□□□ 0.73
COL1A1-205ENST00000476387 MGAMO43451 1857 aa19.62■□□□□ 0.73
COL1A1-205ENST00000476387 GOLIM4O00461 696 aa19.62■□□□□ 0.73
COL1A1-205ENST00000476387 DYNLL1P63167 89 aaKnown RBP19.62■□□□□ 0.73
COL1A1-205ENST00000476387 FAM110CQ1W6H9 321 aa19.62■□□□□ 0.73
COL1A1-205ENST00000476387 SLAIN1Q8ND83 568 aa19.62■□□□□ 0.73
COL1A1-205ENST00000476387 GPATCH3Q96I76 525 aa19.62■□□□□ 0.73
COL1A1-205ENST00000476387 MYCP01106 439 aaPredicted RBP19.61■□□□□ 0.73
COL1A1-205ENST00000476387 ATP5JP18859 108 aa19.61■□□□□ 0.73
COL1A1-205ENST00000476387 GCLCP48506 637 aaPredicted RBP19.61■□□□□ 0.73
COL1A1-205ENST00000476387 BACE1P56817 501 aa19.61■□□□□ 0.73
COL1A1-205ENST00000476387 ANKRD13CQ8N6S4 541 aa19.61■□□□□ 0.73
COL1A1-205ENST00000476387 MIGA1Q8NAN2 632 aa19.61■□□□□ 0.73
COL1A1-205ENST00000476387 BOLA2Q9H3K6 86 aa19.61■□□□□ 0.73
COL1A1-205ENST00000476387 SAP30BPQ9UHR5 308 aaKnown RBP19.61■□□□□ 0.73
COL1A1-205ENST00000476387 C19orf81C9J6K1 198 aa19.6■□□□□ 0.73
COL1A1-205ENST00000476387 TNPO2O14787 897 aaKnown RBP19.6■□□□□ 0.73
COL1A1-205ENST00000476387 USP5P45974 858 aa19.6■□□□□ 0.73
COL1A1-205ENST00000476387 UBXN2AP68543 259 aa19.6■□□□□ 0.73
COL1A1-205ENST00000476387 IRF5Q13568 498 aa19.6■□□□□ 0.73
COL1A1-205ENST00000476387 NKX2-3Q8TAU0 364 aa19.6■□□□□ 0.73
COL1A1-205ENST00000476387 PAG1Q9NWQ8 432 aa19.6■□□□□ 0.73
COL1A1-205ENST00000476387 GABRQQ9UN88 632 aa19.6■□□□□ 0.73
COL1A1-205ENST00000476387 PDE6AP16499 860 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 MTMR2Q13614 643 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 MTFR1Q15390 333 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 SLC9C2Q5TAH2 1124 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 PXYLP1Q8TE99 480 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 GCC1Q96CN9 775 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 ASCC2Q9H1I8 757 aaPredicted RBP19.59■□□□□ 0.73
COL1A1-205ENST00000476387 EHD4Q9H223 541 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 TMOD4Q9NZQ9 345 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 ZBTB21Q9ULJ3 1066 aa19.59■□□□□ 0.73
COL1A1-205ENST00000476387 HOXA7P31268 230 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-205ENST00000476387 FLT3LGP49771 235 aa19.58■□□□□ 0.72
COL1A1-205ENST00000476387 JAG1P78504 1218 aa19.58■□□□□ 0.72
COL1A1-205ENST00000476387 AAMPQ13685 434 aa19.58■□□□□ 0.72
COL1A1-205ENST00000476387 COA7Q96BR5 231 aa19.58■□□□□ 0.72
COL1A1-205ENST00000476387 EDC3Q96F86 508 aaKnown RBP19.58■□□□□ 0.72
COL1A1-205ENST00000476387 HAUS7Q99871 368 aa19.58■□□□□ 0.72
COL1A1-205ENST00000476387 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.58■□□□□ 0.72
COL1A1-205ENST00000476387 ECHDC1Q9NTX5 307 aa19.58■□□□□ 0.72
COL1A1-205ENST00000476387 BIN2Q9UBW5 565 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-205ENST00000476387 ZBTB47Q9UFB7 747 aaPredicted RBP19.58■□□□□ 0.72
COL1A1-205ENST00000476387 DDX60LQ5H9U9 1706 aaKnown RBP19.58■□□□□ 0.72
COL1A1-205ENST00000476387 MAGEB6P1A0A0J9YX57 407 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 USP17L10C9JJH3 530 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 ADCY3O60266 1144 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 GDF11O95390 407 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 GJB1P08034 283 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 CCL5P13501 91 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 TATDN1Q6P1N9 297 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 TTC6Q86TZ1 520 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 RIOK1Q9BRS2 568 aaKnown RBP19.57■□□□□ 0.72
COL1A1-205ENST00000476387 SERPINB13Q9UIV8 391 aa19.57■□□□□ 0.72
COL1A1-205ENST00000476387 ZNF532Q9HCE3 1301 aa19.56■□□□□ 0.72
COL1A1-205ENST00000476387 GJA8P48165 433 aa19.56■□□□□ 0.72
COL1A1-205ENST00000476387 IRX3P78415 501 aaPredicted RBP19.56■□□□□ 0.72
COL1A1-205ENST00000476387 SHISA4Q96DD7 197 aa19.56■□□□□ 0.72
COL1A1-205ENST00000476387 RNF208Q9H0X6 261 aa19.56■□□□□ 0.72
COL1A1-205ENST00000476387 MORF4L1Q9UBU8 362 aa19.56■□□□□ 0.72
COL1A1-205ENST00000476387 MYH8P13535 1937 aa19.55■□□□□ 0.72
COL1A1-205ENST00000476387 SHROOM1Q2M3G4 852 aaPredicted RBP19.55■□□□□ 0.72
COL1A1-205ENST00000476387 CEP290O15078 2479 aa19.54■□□□□ 0.72
COL1A1-205ENST00000476387 DOCK3Q8IZD9 2030 aa19.54■□□□□ 0.72
COL1A1-205ENST00000476387 GH2P01242 217 aa19.54■□□□□ 0.72
COL1A1-205ENST00000476387 CAPN2P17655 700 aa19.54■□□□□ 0.72
COL1A1-205ENST00000476387 CRNKL1Q9BZJ0 848 aaKnown RBP19.54■□□□□ 0.72
COL1A1-205ENST00000476387 BAZ2AQ9UIF9 1905 aaKnown RBP19.53■□□□□ 0.72
COL1A1-205ENST00000476387 TCRBV5S4A2TA0A5A2 114 aa19.53■□□□□ 0.72
COL1A1-205ENST00000476387 INHAP05111 366 aa19.53■□□□□ 0.72
COL1A1-205ENST00000476387 ELNP15502 786 aa19.53■□□□□ 0.72
COL1A1-205ENST00000476387 ZSCAN25Q6NSZ9 544 aa19.53■□□□□ 0.72
COL1A1-205ENST00000476387 USP17L2Q6R6M4 530 aa19.53■□□□□ 0.72
COL1A1-205ENST00000476387 GTF3C2Q8WUA4 911 aaPredicted RBP19.53■□□□□ 0.72
COL1A1-205ENST00000476387 UNC93B1Q9H1C4 597 aa19.53■□□□□ 0.72
COL1A1-205ENST00000476387 ADD2P35612 726 aa19.52■□□□□ 0.72
COL1A1-205ENST00000476387 HERVK_113P62684 666 aa19.52■□□□□ 0.72
COL1A1-205ENST00000476387 HDAC1Q13547 482 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-205ENST00000476387 CERKLQ49MI3 558 aaPredicted RBP19.52■□□□□ 0.72
COL1A1-205ENST00000476387 TSHZ3Q63HK5 1081 aa19.52■□□□□ 0.72
COL1A1-205ENST00000476387 C12orf42Q96LP6 360 aa19.52■□□□□ 0.72
COL1A1-205ENST00000476387 P2RX7Q99572 595 aaKnown RBP19.52■□□□□ 0.72
COL1A1-205ENST00000476387 EMILIN3Q9NT22 766 aa19.52■□□□□ 0.72
COL1A1-205ENST00000476387 TAOK2Q9UL54 1235 aa19.52■□□□□ 0.72
COL1A1-205ENST00000476387 TTC41PQ6P2S7 1318 aa19.51■□□□□ 0.71
COL1A1-205ENST00000476387 ERC2O15083 957 aa19.51■□□□□ 0.71
COL1A1-205ENST00000476387 PLCD1P51178 756 aa19.51■□□□□ 0.71
COL1A1-205ENST00000476387 ABCB5Q2M3G0 1257 aa19.51■□□□□ 0.71
COL1A1-205ENST00000476387 UBE2Q1Q7Z7E8 422 aa19.51■□□□□ 0.71
COL1A1-205ENST00000476387 GPRC5AQ8NFJ5 357 aa19.51■□□□□ 0.71
COL1A1-205ENST00000476387 U2AF1L4Q8WU68 220 aaKnown RBP19.51■□□□□ 0.71
COL1A1-205ENST00000476387 SUPT16HQ9Y5B9 1047 aaKnown RBP19.51■□□□□ 0.71
COL1A1-205ENST00000476387 POLR3DP05423 398 aaPredicted RBP19.5■□□□□ 0.71
COL1A1-205ENST00000476387 SHMT1P34896 483 aa19.5■□□□□ 0.71
COL1A1-205ENST00000476387 USP14P54578 494 aa19.5■□□□□ 0.71
COL1A1-205ENST00000476387 GABPAQ06546 454 aa19.5■□□□□ 0.71
COL1A1-205ENST00000476387 FEZ1Q99689 392 aa19.5■□□□□ 0.71
COL1A1-205ENST00000476387 KIAA1683Q9H0B3 1180 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms