RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 ERO1AQ96HE7 468 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 ARHGAP39Q9C0H5 1083 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 PUS7LQ9H0K6 701 aaKnown RBP8.69□□□□□ -1.02
LSAMP-203ENST00000474851 EHD4Q9H223 541 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 ARMT1Q9H993 441 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 GINM1Q9NU53 330 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 CPA4Q9UI42 421 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 PTPN22Q9Y2R2 807 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 SLC45A1Q9Y2W3 748 aa8.69□□□□□ -1.02
LSAMP-203ENST00000474851 HTTP42858 3142 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 SMIM22K7EJ46 135 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 MBD4O95243 580 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 HLA-DOAP06340 250 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 ASNSP08243 561 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 CD44P16070 742 aaKnown RBP8.68□□□□□ -1.02
LSAMP-203ENST00000474851 SHMT1P34896 483 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 BACE1P56817 501 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 LACTBP83111 547 aaPredicted RBP8.68□□□□□ -1.02
LSAMP-203ENST00000474851 TREML2Q5T2D2 321 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 TTC6Q86TZ1 520 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 CRACR2BQ8N4Y2 399 aaPredicted RBP8.68□□□□□ -1.02
LSAMP-203ENST00000474851 KBTBD3Q8NAB2 608 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 CRNKL1Q9BZJ0 848 aaKnown RBP8.68□□□□□ -1.02
LSAMP-203ENST00000474851 SERPINB13Q9UIV8 391 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 SALL3Q9BXA9 1300 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 ARAP2Q8WZ64 1704 aa8.68□□□□□ -1.02
LSAMP-203ENST00000474851 GDF11O95390 407 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 GH2P01242 217 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 IGHDP01880 384 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 POLR3DP05423 398 aaPredicted RBP8.67□□□□□ -1.02
LSAMP-203ENST00000474851 PRR29P0C7W0 189 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 CYP2D6P10635 497 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 GUCY1A2P33402 732 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 HMGCS2P54868 508 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 AAMPQ13685 434 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 ANKRD45Q5TZF3 282 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 GADL1Q6ZQY3 521 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 PROCA1Q8NCQ7 364 aaPredicted RBP8.67□□□□□ -1.02
LSAMP-203ENST00000474851 EXOC6Q8TAG9 804 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 OSBP2Q969R2 916 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 STRBPQ96SI9 672 aaKnown RBP8.67□□□□□ -1.02
LSAMP-203ENST00000474851 PARK7Q99497 189 aaKnown RBP8.67□□□□□ -1.02
LSAMP-203ENST00000474851 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.67□□□□□ -1.02
LSAMP-203ENST00000474851 EMILIN3Q9NT22 766 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 ATP8A2Q9NTI2 1148 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 MCM9Q9NXL9 1143 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 STAP2Q9UGK3 403 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 ZBTB21Q9ULJ3 1066 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 AGTPBP1Q9UPW5 1226 aa8.67□□□□□ -1.02
LSAMP-203ENST00000474851 TTC41PQ6P2S7 1318 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 USP17L12C9JPN9 530 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 USP17L21D6R901 530 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 RNF113AO15541 343 aaKnown RBP8.66□□□□□ -1.02
LSAMP-203ENST00000474851 HOXA7P31268 230 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-203ENST00000474851 CERKLQ49MI3 558 aaPredicted RBP8.66□□□□□ -1.02
LSAMP-203ENST00000474851 C12orf60Q5U649 245 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 ZSCAN25Q6NSZ9 544 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 POTEEQ6S8J3 1075 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 SIAH1Q8IUQ4 282 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 SMC5Q8IY18 1101 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 ARMC5Q96C12 935 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 GCC1Q96CN9 775 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 DYNLL2Q96FJ2 89 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 AS3MTQ9HBK9 375 aa8.66□□□□□ -1.02
LSAMP-203ENST00000474851 CYP2D7A0A087X1C5 515 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 GSG1L2A8MUP6 293 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 C19orf81C9J6K1 198 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 USP17L10C9JJH3 530 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 GLRX3O76003 335 aaKnown RBP8.65□□□□□ -1.02
LSAMP-203ENST00000474851 GNRH1P01148 92 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 MX1P20591 662 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 PSMC4P43686 418 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 PDE1AP54750 535 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 MTMR2Q13614 643 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 ARHGEF6Q15052 776 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 CTR9Q6PD62 1173 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 PLCD3Q8N3E9 789 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 SLC44A5Q8NCS7 719 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 ACER1Q8TDN7 264 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 APPBP2Q92624 585 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 GPATCH3Q96I76 525 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 P2RX7Q99572 595 aaKnown RBP8.65□□□□□ -1.02
LSAMP-203ENST00000474851 TRIM34Q9BYJ4 488 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 ASCC2Q9H1I8 757 aaPredicted RBP8.65□□□□□ -1.02
LSAMP-203ENST00000474851 SRRDQ9UH36 339 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 PTCH2Q9Y6C5 1203 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 SLC4A4Q9Y6R1 1079 aa8.65□□□□□ -1.02
LSAMP-203ENST00000474851 A0A1W2PRG0 241 aa8.64□□□□□ -1.03
LSAMP-203ENST00000474851 M0R2C6 588 aa8.64□□□□□ -1.03
LSAMP-203ENST00000474851 ERC2O15083 957 aa8.64□□□□□ -1.03
LSAMP-203ENST00000474851 ECM2O94769 699 aaPredicted RBP8.64□□□□□ -1.03
LSAMP-203ENST00000474851 NEFLP07196 543 aa8.64□□□□□ -1.03
LSAMP-203ENST00000474851 OSBPP22059 807 aa8.64□□□□□ -1.03
LSAMP-203ENST00000474851 CDK8P49336 464 aa8.64□□□□□ -1.03
LSAMP-203ENST00000474851 SOX10P56693 466 aa8.64□□□□□ -1.03
LSAMP-203ENST00000474851 SEPT2Q15019 361 aa8.64□□□□□ -1.03
LSAMP-203ENST00000474851 ABCB5Q2M3G0 1257 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms