RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GPAT2Q6NUI2 795 aa22.77■■□□□ 1.24
PTCD3-210ENST00000473829 EVI5LQ96CN4 794 aa22.77■■□□□ 1.24
PTCD3-210ENST00000473829 ZBTB21Q9ULJ3 1066 aa22.77■■□□□ 1.24
PTCD3-210ENST00000473829 GSG1L2A8MUP6 293 aa22.76■■□□□ 1.23
PTCD3-210ENST00000473829 ZMYM1Q5SVZ6 1142 aa22.76■■□□□ 1.23
PTCD3-210ENST00000473829 ANKRD23Q86SG2 305 aa22.76■■□□□ 1.23
PTCD3-210ENST00000473829 SLC44A5Q8NCS7 719 aa22.76■■□□□ 1.23
PTCD3-210ENST00000473829 OSBPL3Q9H4L5 887 aa22.76■■□□□ 1.23
PTCD3-210ENST00000473829 USP17L5A8MUK1 530 aa22.75■■□□□ 1.23
PTCD3-210ENST00000473829 USP17L12C9JPN9 530 aa22.75■■□□□ 1.23
PTCD3-210ENST00000473829 USP17L21D6R901 530 aa22.75■■□□□ 1.23
PTCD3-210ENST00000473829 ASNSP08243 561 aa22.75■■□□□ 1.23
PTCD3-210ENST00000473829 SPP2Q13103 211 aa22.75■■□□□ 1.23
PTCD3-210ENST00000473829 DGKZQ13574 1117 aa22.75■■□□□ 1.23
PTCD3-210ENST00000473829 LRRFIP1Q32MZ4 808 aaKnown RBP22.75■■□□□ 1.23
PTCD3-210ENST00000473829 DYNLL2Q96FJ2 89 aa22.75■■□□□ 1.23
PTCD3-210ENST00000473829 EPB41L4AQ9HCS5 686 aaPredicted RBP22.75■■□□□ 1.23
PTCD3-210ENST00000473829 ZCCHC17Q9NP64 241 aaKnown RBP22.75■■□□□ 1.23
PTCD3-210ENST00000473829 PDHXO00330 501 aa22.74■■□□□ 1.23
PTCD3-210ENST00000473829 GH2P01242 217 aa22.74■■□□□ 1.23
PTCD3-210ENST00000473829 C12orf60Q5U649 245 aa22.74■■□□□ 1.23
PTCD3-210ENST00000473829 CTR9Q6PD62 1173 aa22.74■■□□□ 1.23
PTCD3-210ENST00000473829 GADL1Q6ZQY3 521 aa22.74■■□□□ 1.23
PTCD3-210ENST00000473829 ZNF280CQ8ND82 737 aa22.74■■□□□ 1.23
PTCD3-210ENST00000473829 FKTNO75072 461 aa22.73■■□□□ 1.23
PTCD3-210ENST00000473829 ZFYVE28Q9HCC9 887 aa22.73■■□□□ 1.23
PTCD3-210ENST00000473829 ZSWIM8A7E2V4 1837 aa22.73■■□□□ 1.23
PTCD3-210ENST00000473829 CAP1Q01518 475 aa22.72■■□□□ 1.23
PTCD3-210ENST00000473829 CERKLQ49MI3 558 aaPredicted RBP22.72■■□□□ 1.23
PTCD3-210ENST00000473829 CCDC129Q6ZRS4 1044 aa22.72■■□□□ 1.23
PTCD3-210ENST00000473829 WDR18Q9BV38 432 aa22.72■■□□□ 1.23
PTCD3-210ENST00000473829 TBC1D2Q9BYX2 928 aa22.72■■□□□ 1.23
PTCD3-210ENST00000473829 GINM1Q9NU53 330 aa22.72■■□□□ 1.23
PTCD3-210ENST00000473829 ADGRA2Q96PE1 1338 aa22.72■■□□□ 1.23
PTCD3-210ENST00000473829 TRIM6-TRIM34B2RNG4 842 aa22.71■■□□□ 1.23
PTCD3-210ENST00000473829 GUCY1A2P33402 732 aa22.71■■□□□ 1.23
PTCD3-210ENST00000473829 HMGCS2P54868 508 aa22.71■■□□□ 1.23
PTCD3-210ENST00000473829 ABCB5Q2M3G0 1257 aa22.71■■□□□ 1.23
PTCD3-210ENST00000473829 TREML2Q5T2D2 321 aa22.71■■□□□ 1.23
PTCD3-210ENST00000473829 FASTKD5Q7L8L6 764 aaKnown RBP22.71■■□□□ 1.23
PTCD3-210ENST00000473829 DDRGK1Q96HY6 314 aa22.71■■□□□ 1.23
PTCD3-210ENST00000473829 MCOLN1Q9GZU1 580 aa22.71■■□□□ 1.23
PTCD3-210ENST00000473829 AS3MTQ9HBK9 375 aa22.71■■□□□ 1.23
PTCD3-210ENST00000473829 ARPP21Q9UBL0 812 aaPredicted RBP22.71■■□□□ 1.23
PTCD3-210ENST00000473829 A0A0D9SFI3 127 aa22.7■■□□□ 1.22
PTCD3-210ENST00000473829 FOXP2O15409 715 aa22.7■■□□□ 1.22
PTCD3-210ENST00000473829 TLR2O60603 784 aa22.7■■□□□ 1.22
PTCD3-210ENST00000473829 MTMR2Q13614 643 aa22.7■■□□□ 1.22
PTCD3-210ENST00000473829 GIMAP6Q6P9H5 292 aa22.7■■□□□ 1.22
PTCD3-210ENST00000473829 RILPL2Q969X0 211 aa22.7■■□□□ 1.22
PTCD3-210ENST00000473829 FAM227BQ96M60 508 aa22.7■■□□□ 1.22
PTCD3-210ENST00000473829 CYP2C8P10632 490 aa22.69■■□□□ 1.22
PTCD3-210ENST00000473829 GNAT2P19087 354 aa22.69■■□□□ 1.22
PTCD3-210ENST00000473829 SBK1Q52WX2 424 aa22.69■■□□□ 1.22
PTCD3-210ENST00000473829 SH3D19Q5HYK7 790 aa22.69■■□□□ 1.22
PTCD3-210ENST00000473829 C16orf86Q6ZW13 317 aa22.69■■□□□ 1.22
PTCD3-210ENST00000473829 CTU1Q7Z7A3 348 aaKnown RBP22.69■■□□□ 1.22
PTCD3-210ENST00000473829 SWAP70Q9UH65 585 aa22.69■■□□□ 1.22
PTCD3-210ENST00000473829 AGTPBP1Q9UPW5 1226 aa22.69■■□□□ 1.22
PTCD3-210ENST00000473829 HTTP42858 3142 aa22.68■■□□□ 1.22
PTCD3-210ENST00000473829 ROBO3Q96MS0 1386 aa22.68■■□□□ 1.22
PTCD3-210ENST00000473829 CDK8P49336 464 aa22.68■■□□□ 1.22
PTCD3-210ENST00000473829 BACE1P56817 501 aa22.68■■□□□ 1.22
PTCD3-210ENST00000473829 RAB3GAP1Q15042 981 aa22.68■■□□□ 1.22
PTCD3-210ENST00000473829 AMOTL1Q8IY63 956 aa22.68■■□□□ 1.22
PTCD3-210ENST00000473829 PROCA1Q8NCQ7 364 aaPredicted RBP22.68■■□□□ 1.22
PTCD3-210ENST00000473829 CD99L2Q8TCZ2 262 aa22.68■■□□□ 1.22
PTCD3-210ENST00000473829 GREB1LQ9C091 1923 aaPredicted RBP22.67■■□□□ 1.22
PTCD3-210ENST00000473829 PATL2C9JE40 543 aaKnown RBP22.67■■□□□ 1.22
PTCD3-210ENST00000473829 TDO2P48775 406 aa22.67■■□□□ 1.22
PTCD3-210ENST00000473829 SP3Q02447 781 aa22.67■■□□□ 1.22
PTCD3-210ENST00000473829 NMIQ13287 307 aaPredicted RBP22.67■■□□□ 1.22
PTCD3-210ENST00000473829 SEPT2Q15019 361 aa22.67■■□□□ 1.22
PTCD3-210ENST00000473829 VPS53Q5VIR6 699 aa22.67■■□□□ 1.22
PTCD3-210ENST00000473829 IFNL3Q8IZI9 196 aa22.67■■□□□ 1.22
PTCD3-210ENST00000473829 CPA4Q9UI42 421 aa22.67■■□□□ 1.22
PTCD3-210ENST00000473829 SLC45A1Q9Y2W3 748 aa22.67■■□□□ 1.22
PTCD3-210ENST00000473829 APPP05067 770 aa22.66■■□□□ 1.22
PTCD3-210ENST00000473829 AKR1B1P15121 316 aa22.66■■□□□ 1.22
PTCD3-210ENST00000473829 GSPT1P15170 499 aaKnown RBP22.66■■□□□ 1.22
PTCD3-210ENST00000473829 C17orf99Q6UX52 265 aa22.66■■□□□ 1.22
PTCD3-210ENST00000473829 ACER1Q8TDN7 264 aa22.66■■□□□ 1.22
PTCD3-210ENST00000473829 PARK7Q99497 189 aaKnown RBP22.66■■□□□ 1.22
PTCD3-210ENST00000473829 CABP5Q9NP86 173 aa22.66■■□□□ 1.22
PTCD3-210ENST00000473829 HELLSQ9NRZ9 838 aa22.66■■□□□ 1.22
PTCD3-210ENST00000473829 TAOK2Q9UL54 1235 aa22.66■■□□□ 1.22
PTCD3-210ENST00000473829 MINDY4BA8MYZ0 360 aa22.65■■□□□ 1.22
PTCD3-210ENST00000473829 USP17L10C9JJH3 530 aa22.65■■□□□ 1.22
PTCD3-210ENST00000473829 MPHOSPH10O00566 681 aaKnown RBP22.65■■□□□ 1.22
PTCD3-210ENST00000473829 IFFO2Q5TF58 517 aa22.65■■□□□ 1.22
PTCD3-210ENST00000473829 ZNF589Q86UQ0 364 aaPredicted RBP22.65■■□□□ 1.22
PTCD3-210ENST00000473829 TICAM2Q86XR7 235 aa22.65■■□□□ 1.22
PTCD3-210ENST00000473829 CLEC10AQ8IUN9 316 aa22.65■■□□□ 1.22
PTCD3-210ENST00000473829 STK11IPQ8N1F8 1099 aa22.65■■□□□ 1.22
PTCD3-210ENST00000473829 ABHD8Q96I13 439 aa22.65■■□□□ 1.22
PTCD3-210ENST00000473829 SDSP20132 328 aa22.64■■□□□ 1.21
PTCD3-210ENST00000473829 ZYXQ15942 572 aaKnown RBP22.64■■□□□ 1.21
PTCD3-210ENST00000473829 TTC22Q5TAA0 569 aa22.64■■□□□ 1.21
PTCD3-210ENST00000473829 ERO1AQ96HE7 468 aa22.64■■□□□ 1.21
PTCD3-210ENST00000473829 ARHGAP39Q9C0H5 1083 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms