RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 CDK5RAP2Q96SN8 1893 aa13.76□□□□□ -0.21
ACTB-209ENST00000473257 CYP7A1P22680 504 aa13.75□□□□□ -0.21
ACTB-209ENST00000473257 GCLCP48506 637 aaPredicted RBP13.75□□□□□ -0.21
ACTB-209ENST00000473257 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
ACTB-209ENST00000473257 IRX3P78415 501 aaPredicted RBP13.75□□□□□ -0.21
ACTB-209ENST00000473257 ZYXQ15942 572 aaKnown RBP13.75□□□□□ -0.21
ACTB-209ENST00000473257 Q3C1V9 767 aa13.75□□□□□ -0.21
ACTB-209ENST00000473257 SH3D19Q5HYK7 790 aa13.75□□□□□ -0.21
ACTB-209ENST00000473257 C7orf61Q8IZ16 206 aa13.75□□□□□ -0.21
ACTB-209ENST00000473257 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
ACTB-209ENST00000473257 LRCH3Q96II8 777 aa13.75□□□□□ -0.21
ACTB-209ENST00000473257 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
ACTB-209ENST00000473257 ZBTB21Q9ULJ3 1066 aa13.75□□□□□ -0.21
ACTB-209ENST00000473257 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 HMGCRP04035 888 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 SYN1P17600 705 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 BACE1P56817 501 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 PPP4CP60510 307 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 HERVK_113P62684 666 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 ATP8B2P98198 1209 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 EVX2Q03828 476 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 CCL14Q16627 93 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 CCDC158Q5M9N0 1113 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 ZKSCAN2Q63HK3 967 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 SSH3Q8TE77 659 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 PAGR1Q9BTK6 254 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 WDR18Q9BV38 432 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 BCL11AQ9H165 835 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 PORCNQ9H237 461 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 ANTXR1Q9H6X2 564 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 EMILIN3Q9NT22 766 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 TMOD4Q9NZQ9 345 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 RBPJLQ9UBG7 517 aa13.74□□□□□ -0.21
ACTB-209ENST00000473257 MAST2Q6P0Q8 1798 aa13.73□□□□□ -0.21
ACTB-209ENST00000473257 IDH1O75874 414 aaKnown RBP13.73□□□□□ -0.21
ACTB-209ENST00000473257 BAG3O95817 575 aa13.73□□□□□ -0.21
ACTB-209ENST00000473257 MAP4K4O95819 1239 aaPredicted RBP13.73□□□□□ -0.21
ACTB-209ENST00000473257 GH2P01242 217 aa13.73□□□□□ -0.21
ACTB-209ENST00000473257 PABPC4Q13310 644 aaKnown RBP eCLIP13.73□□□□□ -0.21
ACTB-209ENST00000473257 ITPRIPQ8IWB1 547 aa13.73□□□□□ -0.21
ACTB-209ENST00000473257 EAF2Q96CJ1 260 aaPredicted RBP13.73□□□□□ -0.21
ACTB-209ENST00000473257 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
ACTB-209ENST00000473257 AS3MTQ9HBK9 375 aa13.73□□□□□ -0.21
ACTB-209ENST00000473257 MORF4L1Q9UBU8 362 aa13.73□□□□□ -0.21
ACTB-209ENST00000473257 ASNSP08243 561 aa13.72□□□□□ -0.21
ACTB-209ENST00000473257 PRKAR2AP13861 404 aaKnown RBP13.72□□□□□ -0.21
ACTB-209ENST00000473257 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
ACTB-209ENST00000473257 MAGEB6Q8N7X4 407 aa13.72□□□□□ -0.21
ACTB-209ENST00000473257 DHX36Q9H2U1 1008 aaKnown RBP13.72□□□□□ -0.21
ACTB-209ENST00000473257 GPR108Q9NPR9 543 aa13.72□□□□□ -0.21
ACTB-209ENST00000473257 DDX60LQ5H9U9 1706 aaKnown RBP13.71□□□□□ -0.21
ACTB-209ENST00000473257 USP17L10C9JJH3 530 aa13.71□□□□□ -0.21
ACTB-209ENST00000473257 PLCG2P16885 1265 aa13.71□□□□□ -0.21
ACTB-209ENST00000473257 CCND3P30281 292 aaPredicted RBP13.71□□□□□ -0.21
ACTB-209ENST00000473257 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.21
ACTB-209ENST00000473257 GPRC5AQ8NFJ5 357 aa13.71□□□□□ -0.21
ACTB-209ENST00000473257 ACER1Q8TDN7 264 aa13.71□□□□□ -0.21
ACTB-209ENST00000473257 HMX1Q9NP08 348 aaPredicted RBP13.71□□□□□ -0.21
ACTB-209ENST00000473257 EXOC6BQ9Y2D4 811 aa13.71□□□□□ -0.21
ACTB-209ENST00000473257 FOCADQ5VW36 1801 aa13.71□□□□□ -0.22
ACTB-209ENST00000473257 CUL9Q8IWT3 2517 aa13.7□□□□□ -0.22
ACTB-209ENST00000473257 RPTORQ8N122 1335 aa13.7□□□□□ -0.22
ACTB-209ENST00000473257 CNMDO75829 334 aa13.7□□□□□ -0.22
ACTB-209ENST00000473257 HOXA7P31268 230 aaPredicted RBP13.7□□□□□ -0.22
ACTB-209ENST00000473257 USP5P45974 858 aa13.7□□□□□ -0.22
ACTB-209ENST00000473257 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
ACTB-209ENST00000473257 ERVK-24P63145 666 aa13.7□□□□□ -0.22
ACTB-209ENST00000473257 CACNB2Q08289 660 aaPredicted RBP13.7□□□□□ -0.22
ACTB-209ENST00000473257 FOXP4Q8IVH2 680 aaPredicted RBP13.7□□□□□ -0.22
ACTB-209ENST00000473257 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
ACTB-209ENST00000473257 PANK1Q8TE04 598 aa13.7□□□□□ -0.22
ACTB-209ENST00000473257 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
ACTB-209ENST00000473257 PFASO15067 1338 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 APBB1O00213 710 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 HLA-DOAP06340 250 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 PLCD1P51178 756 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 HNRNPUQ00839 825 aaKnown RBP eCLIP13.69□□□□□ -0.22
ACTB-209ENST00000473257 RAB3GAP1Q15042 981 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 SLFNL1Q499Z3 407 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 MAP3K21Q5TCX8 1036 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 GPR142Q7Z601 462 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 FEZ1Q99689 392 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 NUDT12Q9BQG2 462 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 NBPF3Q9H094 633 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 C11orf49Q9H6J7 331 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 IL1RAPL2Q9NP60 686 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 FLRT1Q9NZU1 646 aa13.69□□□□□ -0.22
ACTB-209ENST00000473257 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
ACTB-209ENST00000473257 MYH1P12882 1939 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 C19orf81C9J6K1 198 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 ZKSCAN1P17029 563 aaPredicted RBP13.68□□□□□ -0.22
ACTB-209ENST00000473257 MAGEA10P43363 369 aaPredicted RBP13.68□□□□□ -0.22
ACTB-209ENST00000473257 MORN1Q5T089 497 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 WDR78Q5VTH9 848 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 CEP85Q6P2H3 762 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 Q7L0L9 218 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 AACSQ86V21 672 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 USP6NLQ92738 828 aa13.68□□□□□ -0.22
ACTB-209ENST00000473257 ZNF512BQ96KM6 892 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms