RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 PAG1Q9NWQ8 432 aa10.95□□□□□ -0.66
USF1-204ENST00000472217 ZBTB21Q9ULJ3 1066 aa10.95□□□□□ -0.66
USF1-204ENST00000472217 HTTP42858 3142 aa10.94□□□□□ -0.66
USF1-204ENST00000472217 MYPNQ86TC9 1320 aa10.94□□□□□ -0.66
USF1-204ENST00000472217 MAGEB6P1A0A0J9YX57 407 aa10.94□□□□□ -0.66
USF1-204ENST00000472217 FCGRTP55899 365 aa10.94□□□□□ -0.66
USF1-204ENST00000472217 MTMR2Q13614 643 aa10.94□□□□□ -0.66
USF1-204ENST00000472217 WDR18Q9BV38 432 aa10.94□□□□□ -0.66
USF1-204ENST00000472217 CRNKL1Q9BZJ0 848 aaKnown RBP10.94□□□□□ -0.66
USF1-204ENST00000472217 EHD4Q9H223 541 aa10.94□□□□□ -0.66
USF1-204ENST00000472217 PNMA3Q9UL41 463 aa10.94□□□□□ -0.66
USF1-204ENST00000472217 TNRC18O15417 2968 aaPredicted RBP10.93□□□□□ -0.66
USF1-204ENST00000472217 MYCP01106 439 aaPredicted RBP10.93□□□□□ -0.66
USF1-204ENST00000472217 EN2P19622 333 aaPredicted RBP10.93□□□□□ -0.66
USF1-204ENST00000472217 HOXD10P28358 340 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 BACE1P56817 501 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 PRKCZQ05513 592 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 TATDN1Q6P1N9 297 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 TTC6Q86TZ1 520 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 LCORLQ8N3X6 602 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 ANKRD13CQ8N6S4 541 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 HAUS7Q99871 368 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 TMEM106CQ9BVX2 250 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 ASCC2Q9H1I8 757 aaPredicted RBP10.93□□□□□ -0.66
USF1-204ENST00000472217 GINM1Q9NU53 330 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 SERPINB13Q9UIV8 391 aa10.93□□□□□ -0.66
USF1-204ENST00000472217 MYH7P12883 1935 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 TNPO2O14787 897 aaKnown RBP10.92□□□□□ -0.66
USF1-204ENST00000472217 GH2P01242 217 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 CHGBP05060 677 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 GRK4P32298 578 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 ADD2P35612 726 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 PLCD1P51178 756 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 EVX2Q03828 476 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.663e-6■■■■□ 26.6
USF1-204ENST00000472217 SLFNL1Q499Z3 407 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 RAET1EQ8TD07 263 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 SDR42E1Q8WUS8 393 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 ARMT1Q9H993 441 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 TMOD4Q9NZQ9 345 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 GABRQQ9UN88 632 aa10.92□□□□□ -0.66
USF1-204ENST00000472217 C19orf81C9J6K1 198 aa10.91□□□□□ -0.66
USF1-204ENST00000472217 USP17L10C9JJH3 530 aa10.91□□□□□ -0.66
USF1-204ENST00000472217 POLR3DP05423 398 aaPredicted RBP10.91□□□□□ -0.66
USF1-204ENST00000472217 SHMT1P34896 483 aa10.91□□□□□ -0.66
USF1-204ENST00000472217 GCLCP48506 637 aaPredicted RBP10.91□□□□□ -0.66
USF1-204ENST00000472217 RRP1P56182 461 aaKnown RBP10.91□□□□□ -0.66
USF1-204ENST00000472217 MTFR1Q15390 333 aa10.91□□□□□ -0.66
USF1-204ENST00000472217 FAM110CQ1W6H9 321 aa10.91□□□□□ -0.66
USF1-204ENST00000472217 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.91□□□□□ -0.66
USF1-204ENST00000472217 DCTPP1Q9H773 170 aa10.91□□□□□ -0.66
USF1-204ENST00000472217 DCP1AQ9NPI6 582 aaPredicted RBP10.91□□□□□ -0.66
USF1-204ENST00000472217 MCM9Q9NXL9 1143 aa10.91□□□□□ -0.66
USF1-204ENST00000472217 PRKAB2O43741 272 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 MBD4O95243 580 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 HOXA7P31268 230 aaPredicted RBP10.9□□□□□ -0.66
USF1-204ENST00000472217 FLT3LGP49771 235 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 IRX3P78415 501 aaPredicted RBP10.9□□□□□ -0.66
USF1-204ENST00000472217 GABPAQ06546 454 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 RAB3GAP1Q15042 981 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 ABCB5Q2M3G0 1257 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 CERKLQ49MI3 558 aaPredicted RBP10.9□□□□□ -0.66
USF1-204ENST00000472217 P2RX7Q99572 595 aaKnown RBP10.9□□□□□ -0.66
USF1-204ENST00000472217 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 ECHDC1Q9NTX5 307 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 MORF4L1Q9UBU8 362 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 PCDHB15Q9Y5E8 787 aa10.9□□□□□ -0.66
USF1-204ENST00000472217 ADCY3O60266 1144 aa10.89□□□□□ -0.67
USF1-204ENST00000472217 CYP2D6P10635 497 aa10.89□□□□□ -0.67
USF1-204ENST00000472217 UBE3CQ15386 1083 aa10.89□□□□□ -0.67
USF1-204ENST00000472217 ZYXQ15942 572 aaKnown RBP10.89□□□□□ -0.67
USF1-204ENST00000472217 PRPF38BQ5VTL8 546 aaKnown RBP10.89□□□□□ -0.67
USF1-204ENST00000472217 TSHZ3Q63HK5 1081 aa10.89□□□□□ -0.67
USF1-204ENST00000472217 SLAIN1Q8ND83 568 aa10.89□□□□□ -0.67
USF1-204ENST00000472217 COA7Q96BR5 231 aa10.89□□□□□ -0.67
USF1-204ENST00000472217 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
USF1-204ENST00000472217 FEZ1Q99689 392 aa10.89□□□□□ -0.67
USF1-204ENST00000472217 KIAA1683Q9H0B3 1180 aa10.89□□□□□ -0.67
USF1-204ENST00000472217 BIN2Q9UBW5 565 aaPredicted RBP10.89□□□□□ -0.67
USF1-204ENST00000472217 BAZ2AQ9UIF9 1905 aaKnown RBP10.88□□□□□ -0.67
USF1-204ENST00000472217 SMIM22K7EJ46 135 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 PEX10O60683 326 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 CCL5P13501 91 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 ELNP15502 786 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 GUCY1A2P33402 732 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 HERVK_113P62684 666 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 IRF5Q13568 498 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 ZSCAN25Q6NSZ9 544 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 USP17L2Q6R6M4 530 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 SLC44A5Q8NCS7 719 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 ACER1Q8TDN7 264 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 SHISA4Q96DD7 197 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 GPATCH3Q96I76 525 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 C12orf42Q96LP6 360 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 PUS7LQ9H0K6 701 aaKnown RBP10.88□□□□□ -0.67
USF1-204ENST00000472217 TXNRD2Q9NNW7 524 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 CABP5Q9NP86 173 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 ATP8A2Q9NTI2 1148 aa10.88□□□□□ -0.67
USF1-204ENST00000472217 PLXNB2O15031 1838 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms