RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
CDHR3-209ENST00000472116 OSBPL5Q9H0X9 879 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-209ENST00000472116 CXXC1Q9P0U4 656 aaPredicted RBP12.87□□□□□ -0.35
CDHR3-209ENST00000472116 HERVK_113P62684 666 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 ERVK-24P63145 666 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 MAP3K10Q02779 954 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 MORN1Q5T089 497 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 WDR78Q5VTH9 848 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 CCDC174Q6PII3 467 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 TSPYL6Q8N831 410 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 USP6NLQ92738 828 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 PAGR1Q9BTK6 254 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 IDI2Q9BXS1 227 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 EPHX3Q9H6B9 360 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDHR3-209ENST00000472116 C9orf78Q9NZ63 289 aaPredicted RBP12.86□□□□□ -0.35
CDHR3-209ENST00000472116 GBF1Q92538 1859 aa12.86□□□□□ -0.35
CDHR3-209ENST00000472116 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 USP17L5A8MUK1 530 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 GRM8O00222 908 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 CLTBP09497 229 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 MRE11P49959 708 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 CCNA1P78396 465 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 PICALMQ13492 652 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 SNX17Q15036 470 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 EPHA10Q5JZY3 1008 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
CDHR3-209ENST00000472116 IVNS1ABPQ9Y6Y0 642 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
CDHR3-209ENST00000472116 DDTLA6NHG4 134 aaPredicted RBP12.84□□□□□ -0.35
CDHR3-209ENST00000472116 TBC1D12O60347 775 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 PDE8BO95263 885 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 BMP1P13497 986 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 TLE2Q04725 743 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 SKIV2LQ15477 1246 aaKnown RBP12.84□□□□□ -0.35
CDHR3-209ENST00000472116 TWISTNBQ3B726 338 aaPredicted RBP12.84□□□□□ -0.35
CDHR3-209ENST00000472116 SH3D19Q5HYK7 790 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 MICALL1Q8N3F8 863 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 PORCNQ9H237 461 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
CDHR3-209ENST00000472116 GPR37L1O60883 481 aa12.83□□□□□ -0.36
CDHR3-209ENST00000472116 PRDX5P30044 214 aa12.83□□□□□ -0.36
CDHR3-209ENST00000472116 HOXA7P31268 230 aaPredicted RBP12.83□□□□□ -0.36
CDHR3-209ENST00000472116 RALBP1Q15311 655 aa12.83□□□□□ -0.36
CDHR3-209ENST00000472116 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
CDHR3-209ENST00000472116 C1orf53Q5VUE5 145 aa12.83□□□□□ -0.36
CDHR3-209ENST00000472116 TXNRD2Q9NNW7 524 aa12.83□□□□□ -0.36
CDHR3-209ENST00000472116 GNL3LQ9NVN8 582 aaKnown RBP12.83□□□□□ -0.36
CDHR3-209ENST00000472116 LRRC37A2A6NM11 1700 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 SLC5A1P13866 664 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 ADCYAP1R1P41586 468 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 EPHB4P54760 987 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 MTMR2Q13614 643 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 RAB30Q15771 203 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 ZGPATQ8N5A5 531 aaKnown RBP12.82□□□□□ -0.36
CDHR3-209ENST00000472116 FERMT2Q96AC1 680 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 PBX4Q9BYU1 374 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 TMEM39AQ9NV64 488 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 SMCHD1A6NHR9 2005 aa12.82□□□□□ -0.36
CDHR3-209ENST00000472116 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 KIAA0355O15063 1070 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 PEX10O60683 326 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 CYP2C19P33261 490 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 CAP2P40123 477 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 KCNQ1P51787 676 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 BACE1P56817 501 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 DZIP1Q86YF9 867 aaKnown RBP12.81□□□□□ -0.36
CDHR3-209ENST00000472116 SLC28A3Q9HAS3 691 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 FLRT1Q9NZU1 646 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 RBPJLQ9UBG7 517 aa12.81□□□□□ -0.36
CDHR3-209ENST00000472116 FAM196BA6NMK8 535 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 C19orf81C9J6K1 198 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 PQBP1O60828 265 aaKnown RBP12.8□□□□□ -0.36
CDHR3-209ENST00000472116 ATXN8OSP0DMR3 200 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 SLURP2P0DP57 97 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 TFF2Q03403 129 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 ADGRE1Q14246 886 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 Q3C1V9 767 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 LRRC24Q50LG9 513 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 BEND3Q5T5X7 828 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 ANO1Q5XXA6 986 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 ADAMTS8Q9UP79 889 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
CDHR3-209ENST00000472116 FAM86C2PA6NEL3 165 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 SMIM22K7EJ46 135 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 APAF1O14727 1248 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 SEPT4O43236 478 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 ASNSP08243 561 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 CYBAP13498 195 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 PTPREP23469 700 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 ITGB8P26012 769 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 PBX2P40425 430 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 PPIGQ13427 754 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDHR3-209ENST00000472116 SLC44A5Q8NCS7 719 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 HERVK_113Q902F9 699 aa12.79□□□□□ -0.36
CDHR3-209ENST00000472116 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms