RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 CYP2C8P10632 490 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 HMGCS2P54868 508 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 EVX2Q03828 476 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 MTMR2Q13614 643 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 PKN2Q16513 984 aaKnown RBP15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 CERKLQ49MI3 558 aaPredicted RBP15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 SMC5Q8IY18 1101 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 APPBP2Q92624 585 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 OSBP2Q969R2 916 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 TBC1D2Q9BYX2 928 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 ATP8A2Q9NTI2 1148 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 CPA4Q9UI42 421 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
PPP1R3F-204ENST00000471261 MPHOSPH10O00566 681 aaKnown RBP15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 PDE1AP54750 535 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 RAB3GAP1Q15042 981 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 ABCB5Q2M3G0 1257 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 TATDN1Q6P1N9 297 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 OTOP1Q7RTM1 612 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 CHD1LQ86WJ1 897 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 STRBPQ96SI9 672 aaKnown RBP15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 AGTPBP1Q9UPW5 1226 aa15.16■□□□□ 0.02
PPP1R3F-204ENST00000471261 MYH1P12882 1939 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 CYP2D7A0A087X1C5 515 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 USP17L12C9JPN9 530 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 USP17L21D6R901 530 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 M0R2C6 588 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 SHMT1P34896 483 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 NUCB1Q02818 461 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 KIF22Q14807 665 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 SMCR8Q8TEV9 937 aaPredicted RBP15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 DYNLL2Q96FJ2 89 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 CABP5Q9NP86 173 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 GINM1Q9NU53 330 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
PPP1R3F-204ENST00000471261 NAV1Q8NEY1 1877 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 USP17L10C9JJH3 530 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 GPAA1O43292 621 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 APPP05067 770 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 BACE1P56817 501 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 GABPAQ06546 454 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 ARHGEF6Q15052 776 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 FBXO46Q6PJ61 603 aaPredicted RBP15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 C17orf99Q6UX52 265 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 PROCA1Q8NCQ7 364 aaPredicted RBP15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 SLC44A5Q8NCS7 719 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 FEZ1Q99689 392 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 HPS5Q9UPZ3 1129 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 SLC45A1Q9Y2W3 748 aa15.14■□□□□ 0.01
PPP1R3F-204ENST00000471261 LACTBP83111 547 aaPredicted RBP15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 CAP1Q01518 475 aa15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 ZYXQ15942 572 aaKnown RBP15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 DDX60LQ5H9U9 1706 aaKnown RBP15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 CTR9Q6PD62 1173 aa15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 EVI5LQ96CN4 794 aa15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 SEC62Q99442 399 aaKnown RBP15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 ARHGAP39Q9C0H5 1083 aa15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 SWAP70Q9UH65 585 aa15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 PNMA3Q9UL41 463 aa15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 ATAD5Q96QE3 1844 aa15.13■□□□□ 0.01
PPP1R3F-204ENST00000471261 MYH7P12883 1935 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 GSG1L2A8MUP6 293 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 TRIM6-TRIM34B2RNG4 842 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 C19orf81C9J6K1 198 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 SMIM22K7EJ46 135 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 GNAT2P19087 354 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 TDO2P48775 406 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 PABPC4Q13310 644 aaKnown RBP eCLIP15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 SH3D19Q5HYK7 790 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 STK11IPQ8N1F8 1099 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 ARPP21Q9UBL0 812 aaPredicted RBP15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 PHIPQ8WWQ0 1821 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 ADGRA2Q96PE1 1338 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 HTTP42858 3142 aa15.12■□□□□ 0.01
PPP1R3F-204ENST00000471261 MINDY4BA8MYZ0 360 aa15.11■□□□□ 0.01
PPP1R3F-204ENST00000471261 OSBPP22059 807 aa15.11■□□□□ 0.01
PPP1R3F-204ENST00000471261 IRX3P78415 501 aaPredicted RBP15.11■□□□□ 0.01
PPP1R3F-204ENST00000471261 SEPT2Q15019 361 aa15.11■□□□□ 0.01
PPP1R3F-204ENST00000471261 ZMYM1Q5SVZ6 1142 aa15.11■□□□□ 0.01
PPP1R3F-204ENST00000471261 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
PPP1R3F-204ENST00000471261 PTPN22Q9Y2R2 807 aa15.11■□□□□ 0.01
PPP1R3F-204ENST00000471261 CENPFP49454 3210 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 PATL2C9JE40 543 aaKnown RBP15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 FMNL1O95466 1100 aaPredicted RBP15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 PSMC4P43686 418 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 CDK8P49336 464 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 GIMAP6Q6P9H5 292 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 USP17L2Q6R6M4 530 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 CCDC129Q6ZRS4 1044 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 C16orf86Q6ZW13 317 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 PLEKHM2Q8IWE5 1019 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 ANKRD13CQ8N6S4 541 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 ACER1Q8TDN7 264 aa15.1■□□□□ 0.01
PPP1R3F-204ENST00000471261 NACAP1Q9BZK3 213 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms