RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 KLHDC7BQ96G42 594 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 MRFAP1L1Q96HT8 127 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 ZC3H12CQ9C0D7 883 aaKnown RBP8.29□□□□□ -1.08
CKS1B-204ENST00000471245 TBX22Q9Y458 520 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 WDR7Q9Y4E6 1490 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 KIAA0556O60303 1618 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 SYNGAP1Q96PV0 1343 aa8.29□□□□□ -1.08
CKS1B-204ENST00000471245 PTPRMP28827 1452 aa8.28□□□□□ -1.08
CKS1B-204ENST00000471245 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
CKS1B-204ENST00000471245 LRRFIP1Q32MZ4 808 aaKnown RBP8.28□□□□□ -1.08
CKS1B-204ENST00000471245 FBXW10Q5XX13 1052 aa8.28□□□□□ -1.08
CKS1B-204ENST00000471245 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
CKS1B-204ENST00000471245 HDXQ7Z353 690 aa8.28□□□□□ -1.08
CKS1B-204ENST00000471245 C19orf47Q8N9M1 422 aaKnown RBP8.28□□□□□ -1.08
CKS1B-204ENST00000471245 GALNT11Q8NCW6 608 aa8.28□□□□□ -1.08
CKS1B-204ENST00000471245 PLPPR2Q96GM1 343 aa8.28□□□□□ -1.08
CKS1B-204ENST00000471245 ACTR10Q9NZ32 417 aa8.28□□□□□ -1.08
CKS1B-204ENST00000471245 PCF11O94913 1555 aaKnown RBP8.27□□□□□ -1.09
CKS1B-204ENST00000471245 CARMIL1Q5VZK9 1371 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 BCORL1Q5H9F3 1711 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 LOC100289279A0A1B0GTE1 492 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 CTSBP07858 339 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 CASP7P55210 303 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 PDE3AQ14432 1141 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 GRIK4Q16099 956 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
CKS1B-204ENST00000471245 UGGT2Q9NYU1 1516 aa8.27□□□□□ -1.09
CKS1B-204ENST00000471245 GRIN3BO60391 1043 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 HTR3BO95264 441 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 CDK8P49336 464 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 NLRP12P59046 1061 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 INPP5AQ14642 412 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 CYFIP1Q7L576 1253 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 ELMO3Q96BJ8 720 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 MSRB2Q9Y3D2 182 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 CD109Q6YHK3 1445 aa8.26□□□□□ -1.09
CKS1B-204ENST00000471245 MADDQ8WXG6 1647 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 ADAM11O75078 769 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 PDE4BQ07343 736 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 MLECQ14165 292 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 ADGRE1Q14246 886 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 RASA3Q14644 834 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 FOXD4L6Q3SYB3 417 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-204ENST00000471245 FOXD4L3Q6VB84 417 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-204ENST00000471245 CD163Q86VB7 1156 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 TAB3Q8N5C8 712 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-204ENST00000471245 TMEM40Q8WWA1 233 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 PUS7Q96PZ0 661 aaKnown RBP8.25□□□□□ -1.09
CKS1B-204ENST00000471245 DEPDC7Q96QD5 511 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 SRPK1Q96SB4 655 aaKnown RBP8.25□□□□□ -1.09
CKS1B-204ENST00000471245 TM9SF2Q99805 663 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 SNTG2Q9NY99 539 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 PCDHGC5Q9Y5F6 944 aa8.25□□□□□ -1.09
CKS1B-204ENST00000471245 CTTNBP2Q8WZ74 1663 aa8.24□□□□□ -1.09
CKS1B-204ENST00000471245 ARAP3Q8WWN8 1544 aa8.24□□□□□ -1.09
CKS1B-204ENST00000471245 C1QTNF9BB2RNN3 333 aa8.24□□□□□ -1.09
CKS1B-204ENST00000471245 DDR2Q16832 855 aa8.24□□□□□ -1.09
CKS1B-204ENST00000471245 ZC3H12AQ5D1E8 599 aaKnown RBP8.24□□□□□ -1.09
CKS1B-204ENST00000471245 SDE2Q6IQ49 451 aa8.24□□□□□ -1.09
CKS1B-204ENST00000471245 JAZF1Q86VZ6 243 aa8.24□□□□□ -1.09
CKS1B-204ENST00000471245 WDR89Q96FK6 387 aaPredicted RBP8.24□□□□□ -1.09
CKS1B-204ENST00000471245 WDR18Q9BV38 432 aa8.24□□□□□ -1.09
CKS1B-204ENST00000471245 GMIPQ9P107 970 aa8.24□□□□□ -1.09
CKS1B-204ENST00000471245 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
CKS1B-204ENST00000471245 SLFN14P0C7P3 912 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 LIG1P18858 919 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 PLA2G4EQ3MJ16 856 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 TMEM201Q5SNT2 666 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 NLGN1Q8N2Q7 840 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 CELF2-AS1Q8N7Q2 184 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 KRTAP4-8Q9BYQ9 185 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 CCDC113Q9H0I3 377 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 REV1Q9UBZ9 1251 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 ADAM30Q9UKF2 790 aa8.23□□□□□ -1.09
CKS1B-204ENST00000471245 ABCA8O94911 1581 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 MEGF11A6BM72 1044 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 AOC2O75106 756 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 ITGB2P05107 769 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 GUCY2CP25092 1073 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 ERVK-24P63145 666 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 RING1Q06587 406 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 FXNQ16595 210 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 CORINQ9Y5Q5 1042 aa8.22□□□□□ -1.09
CKS1B-204ENST00000471245 DCDC2CA8MYV0 355 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 DDX3YO15523 660 aaKnown RBP8.21□□□□□ -1.1
CKS1B-204ENST00000471245 DLGAP3O95886 979 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 CHRNA4P43681 627 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 MBTPS1Q14703 1052 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 DUOXA2Q1HG44 320 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 EXOSC6Q5RKV6 272 aaKnown RBP8.21□□□□□ -1.1
CKS1B-204ENST00000471245 GPAT2Q6NUI2 795 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 SHISA2Q6UWI4 295 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 TNKS2Q9H2K2 1166 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 KCNK4Q9NYG8 393 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 MAPK8IP1Q9UQF2 711 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 SLC12A7Q9Y666 1083 aa8.21□□□□□ -1.1
CKS1B-204ENST00000471245 FRMPD1Q5SYB0 1578 aa8.2□□□□□ -1.1
CKS1B-204ENST00000471245 PRAMEF27A3QJZ7 478 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms