RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 WDR18Q9BV38 432 aa14.98□□□□□ -0.01
SPTLC1-204ENST00000469778 LSG1Q9H089 658 aaKnown RBP14.98□□□□□ -0.01
SPTLC1-204ENST00000469778 CNNM2Q9H8M5 875 aa14.98□□□□□ -0.01
SPTLC1-204ENST00000469778 SNCAIPQ9Y6H5 919 aa14.98□□□□□ -0.01
SPTLC1-204ENST00000469778 NAV1Q8NEY1 1877 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 SLC10A3P09131 477 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 PTPRAP18433 802 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 PTH1RQ03431 593 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 CCDC178Q5BJE1 867 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 STAG1Q8WVM7 1258 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 DYNLL2Q96FJ2 89 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 WNK4Q96J92 1243 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 CAPNS2Q96L46 248 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 IL25Q9H293 177 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 KANSL2Q9H9L4 492 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 SYNPO2Q9UMS6 1093 aa14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 DDX60LQ5H9U9 1706 aaKnown RBP14.97□□□□□ -0.01
SPTLC1-204ENST00000469778 MANSC4A6NHS7 340 aaPredicted RBP14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 FAM196BA6NMK8 535 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 FAM155AB1AL88 458 aaPredicted RBP14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 C19orf81C9J6K1 198 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 GTF2A2P52657 109 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 SLC4A8Q2Y0W8 1093 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 RASAL3Q86YV0 1011 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 OPTNQ96CV9 577 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 CLMNQ96JQ2 1002 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 KRT23Q9C075 422 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 ELP3Q9H9T3 547 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 ZBTB21Q9ULJ3 1066 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 ZHX2Q9Y6X8 837 aa14.96□□□□□ -0.01
SPTLC1-204ENST00000469778 WDR33Q9C0J8 1336 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 GH2P01242 217 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 ZKSCAN1P17029 563 aaPredicted RBP14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 RASA1P20936 1047 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 SREBF2Q12772 1141 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 TRDNQ13061 729 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 SNAPC2Q13487 334 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 NECTIN1Q15223 517 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 TSGA10IPQ3SY00 556 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 PAXIP1Q6ZW49 1069 aaPredicted RBP14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 DNAJC5GQ8N7S2 189 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 ZNF280CQ8ND82 737 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 NEDD1Q8NHV4 660 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 ESR2Q92731 530 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 SH2D4AQ9H788 454 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 FZD1Q9UP38 647 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 KCNH4Q9UQ05 1017 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 AFG3L2Q9Y4W6 797 aa14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 RBM8AQ9Y5S9 174 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-204ENST00000469778 BAZ2AQ9UIF9 1905 aaKnown RBP14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 TESPA1A2RU30 521 aaPredicted RBP14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 TSPY3P0CV98 308 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 TSPY8P0CW00 308 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 CETPP11597 493 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 VEGFBP49765 207 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 USP14P54578 494 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 KRT32Q14532 448 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 RRP1BQ14684 758 aaKnown RBP14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 OTUD7BQ6GQQ9 843 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 CYP4F22Q6NT55 531 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 FASTKD5Q7L8L6 764 aaKnown RBP14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 SLC44A5Q8NCS7 719 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 TTC14Q96N46 770 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 ZCCHC17Q9NP64 241 aaKnown RBP14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 TCP11L1Q9NUJ3 509 aa14.94□□□□□ -0.02
SPTLC1-204ENST00000469778 MPHOSPH10O00566 681 aaKnown RBP14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 IRF6O14896 467 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 CYP21A2P08686 494 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 MCCP23508 829 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 TM4SF4P48230 202 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 HAND2P61296 217 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 TFAP4Q01664 338 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 CTDSPL2Q05D32 466 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 OTUD5Q96G74 571 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 MTA3Q9BTC8 594 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 ARHGEF10LQ9HCE6 1279 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 NYAP2Q9P242 653 aa14.93□□□□□ -0.02
SPTLC1-204ENST00000469778 TSPY2A6NKD2 308 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 USP17L10C9JJH3 530 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 RANBP6O60518 1105 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 GDF11O95390 407 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 ALDH1A1P00352 501 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 SLURP2P0DP57 97 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 AKR1B1P15121 316 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 BACE1P56817 501 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 MAP2K1Q02750 393 aaPredicted RBP14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 SPP2Q13103 211 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 RAB3GAP1Q15042 981 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 CREB3L3Q68CJ9 461 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 IQCA1Q86XH1 822 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 NCOA7Q8NI08 942 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 KCNB2Q92953 911 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 MKL1Q969V6 931 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 KIAA1683Q9H0B3 1180 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 PLIN4Q96Q06 1357 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 SIPA1L1O43166 1804 aa14.92□□□□□ -0.02
SPTLC1-204ENST00000469778 IGKV6D-41A0A0C4DH26 115 aa14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 HMGB1P09429 215 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-204ENST00000469778 HSPA4P34932 840 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms