RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CACNB2Q08289 660 aaPredicted RBP15.07■□□□□ 0
UBR4-211ENST00000467272 MTMR2Q13614 643 aa15.07■□□□□ 0
UBR4-211ENST00000467272 SHROOM1Q2M3G4 852 aaPredicted RBP15.07■□□□□ 0
UBR4-211ENST00000467272 Q3C1V9 767 aa15.07■□□□□ 0
UBR4-211ENST00000467272 SH3RF3Q8TEJ3 882 aaPredicted RBP15.07■□□□□ 0
UBR4-211ENST00000467272 DHX36Q9H2U1 1008 aaKnown RBP15.07■□□□□ 0
UBR4-211ENST00000467272 GINM1Q9NU53 330 aa15.07■□□□□ 0
UBR4-211ENST00000467272 ASNSP08243 561 aa15.06■□□□□ 0
UBR4-211ENST00000467272 SYN1P17600 705 aa15.06■□□□□ 0
UBR4-211ENST00000467272 ADGRA1Q86SQ6 560 aa15.06■□□□□ 0
UBR4-211ENST00000467272 TEX11Q8IYF3 940 aa15.06■□□□□ 0
UBR4-211ENST00000467272 GPRC5AQ8NFJ5 357 aa15.06■□□□□ 0
UBR4-211ENST00000467272 SOCS4Q8WXH5 440 aa15.06■□□□□ 0
UBR4-211ENST00000467272 PORCNQ9H237 461 aa15.06■□□□□ 0
UBR4-211ENST00000467272 AS3MTQ9HBK9 375 aa15.06■□□□□ 0
UBR4-211ENST00000467272 ATAD5Q96QE3 1844 aa15.06■□□□□ 0
UBR4-211ENST00000467272 PRUNE2Q8WUY3 3088 aa15.06■□□□□ 0
UBR4-211ENST00000467272 C19orf81C9J6K1 198 aa15.05■□□□□ -0
UBR4-211ENST00000467272 POTEB2H3BUK9 544 aa15.05■□□□□ -0
UBR4-211ENST00000467272 CYP2B6P20813 491 aa15.05■□□□□ -0
UBR4-211ENST00000467272 MAPK4P31152 587 aa15.05■□□□□ -0
UBR4-211ENST00000467272 RARSP54136 660 aaKnown RBP15.05■□□□□ -0
UBR4-211ENST00000467272 LRRC26Q2I0M4 334 aa15.05■□□□□ -0
UBR4-211ENST00000467272 FOXP4Q8IVH2 680 aaPredicted RBP15.05■□□□□ -0
UBR4-211ENST00000467272 TRMT44Q8IYL2 757 aaKnown RBP15.05■□□□□ -0
UBR4-211ENST00000467272 NUDT12Q9BQG2 462 aa15.05■□□□□ -0
UBR4-211ENST00000467272 EMILIN3Q9NT22 766 aa15.05■□□□□ -0
UBR4-211ENST00000467272 MUC3AQ02505 3323 aa15.04■□□□□ -0
UBR4-211ENST00000467272 FLT1P17948 1338 aa15.04■□□□□ -0
UBR4-211ENST00000467272 ZNF316A6NFI3 1004 aaPredicted RBP15.04■□□□□ -0
UBR4-211ENST00000467272 IGSF3O75054 1194 aa15.04■□□□□ -0
UBR4-211ENST00000467272 CNMDO75829 334 aa15.04■□□□□ -0
UBR4-211ENST00000467272 GNAI3P08754 354 aa15.04■□□□□ -0
UBR4-211ENST00000467272 ERVK-9P63128 1117 aa15.04■□□□□ -0
UBR4-211ENST00000467272 ERVK-24P63145 666 aa15.04■□□□□ -0
UBR4-211ENST00000467272 CCL14Q16627 93 aa15.04■□□□□ -0
UBR4-211ENST00000467272 FAM109BQ6ICB4 259 aaPredicted RBP15.04■□□□□ -0
UBR4-211ENST00000467272 TTC28Q96AY4 2481 aa15.03■□□□□ -0
UBR4-211ENST00000467272 USP17L10C9JJH3 530 aa15.03■□□□□ -0
UBR4-211ENST00000467272 CCND3P30281 292 aaPredicted RBP15.03■□□□□ -0
UBR4-211ENST00000467272 IRX3P78415 501 aaPredicted RBP15.03■□□□□ -0
UBR4-211ENST00000467272 GPR142Q7Z601 462 aa15.03■□□□□ -0
UBR4-211ENST00000467272 ZNF512BQ96KM6 892 aaPredicted RBP15.03■□□□□ -0
UBR4-211ENST00000467272 C12orf42Q96LP6 360 aa15.03■□□□□ -0
UBR4-211ENST00000467272 NEUROD6Q96NK8 337 aa15.03■□□□□ -0
UBR4-211ENST00000467272 GPR108Q9NPR9 543 aa15.03■□□□□ -0
UBR4-211ENST00000467272 RAI14Q9P0K7 980 aa15.03■□□□□ -0
UBR4-211ENST00000467272 ZBTB21Q9ULJ3 1066 aa15.03■□□□□ -0
UBR4-211ENST00000467272 PNMA6EA0A0J9YXQ4 647 aa15.02■□□□□ -0
UBR4-211ENST00000467272 CYP2E1P05181 493 aaPredicted RBP15.02■□□□□ -0
UBR4-211ENST00000467272 HOXC6P09630 235 aa15.02■□□□□ -0
UBR4-211ENST00000467272 UQCRFS1P1P0C7P4 283 aa15.02■□□□□ -0
UBR4-211ENST00000467272 TATDN1Q6P1N9 297 aa15.02■□□□□ -0
UBR4-211ENST00000467272 GTF3C2Q8WUA4 911 aaPredicted RBP15.02■□□□□ -0
UBR4-211ENST00000467272 APBA2Q99767 749 aa15.02■□□□□ -0
UBR4-211ENST00000467272 UBE2OQ9C0C9 1292 aaKnown RBP15.02■□□□□ -0
UBR4-211ENST00000467272 TMOD4Q9NZQ9 345 aa15.02■□□□□ -0
UBR4-211ENST00000467272 ZKSCAN1P17029 563 aaPredicted RBP15.01□□□□□ -0.01
UBR4-211ENST00000467272 RGS2P41220 211 aa15.01□□□□□ -0.01
UBR4-211ENST00000467272 LBX2Q6XYB7 198 aa15.01□□□□□ -0.01
UBR4-211ENST00000467272 PLEKHH3Q7Z736 793 aa15.01□□□□□ -0.01
UBR4-211ENST00000467272 TGFBRAP1Q8WUH2 860 aa15.01□□□□□ -0.01
UBR4-211ENST00000467272 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
UBR4-211ENST00000467272 AATFQ9NY61 560 aaKnown RBP eCLIP15.01□□□□□ -0.01
UBR4-211ENST00000467272 FLRT1Q9NZU1 646 aa15.01□□□□□ -0.01
UBR4-211ENST00000467272 LRP2BPQ9P2M1 347 aa15.01□□□□□ -0.01
UBR4-211ENST00000467272 PALD1Q9ULE6 856 aa15.01□□□□□ -0.01
UBR4-211ENST00000467272 GDF11O95390 407 aa15□□□□□ -0.01
UBR4-211ENST00000467272 BAG3O95817 575 aa15□□□□□ -0.01
UBR4-211ENST00000467272 PLCG2P16885 1265 aa15□□□□□ -0.01
UBR4-211ENST00000467272 POLA2Q14181 598 aa15□□□□□ -0.01
UBR4-211ENST00000467272 NAA16Q6N069 864 aaPredicted RBP15□□□□□ -0.01
UBR4-211ENST00000467272 MAPKAPK5Q8IW41 473 aa15□□□□□ -0.01
UBR4-211ENST00000467272 RABGAP1Q9Y3P9 1069 aa15□□□□□ -0.01
UBR4-211ENST00000467272 FOCADQ5VW36 1801 aa15□□□□□ -0.01
UBR4-211ENST00000467272 MAST2Q6P0Q8 1798 aa15□□□□□ -0.01
UBR4-211ENST00000467272 MAP2K5Q13163 448 aa14.99□□□□□ -0.01
UBR4-211ENST00000467272 USP17L2Q6R6M4 530 aa14.99□□□□□ -0.01
UBR4-211ENST00000467272 COL25A1Q9BXS0 654 aaPredicted RBP14.99□□□□□ -0.01
UBR4-211ENST00000467272 CDK5RAP2Q96SN8 1893 aa14.99□□□□□ -0.01
UBR4-211ENST00000467272 GNAI2P04899 355 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 TRIM27P14373 513 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 PDE3AQ14432 1141 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 GRB14Q14449 540 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 TNNI3KQ59H18 835 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 GORABQ5T7V8 394 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 CATSPERGQ6ZRH7 1159 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 TRPV1Q8NER1 839 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 DBNDD2Q9BQY9 259 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 KIAA1683Q9H0B3 1180 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 EHD4Q9H223 541 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 PIH1D3Q9NQM4 214 aaKnown RBP14.98□□□□□ -0.01
UBR4-211ENST00000467272 SNRKQ9NRH2 765 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 FPGT-TNNI3KV9GXZ4 949 aa14.98□□□□□ -0.01
UBR4-211ENST00000467272 SLC15A5A6NIM6 579 aa14.97□□□□□ -0.01
UBR4-211ENST00000467272 GH2P01242 217 aa14.97□□□□□ -0.01
UBR4-211ENST00000467272 PTPREP23469 700 aa14.97□□□□□ -0.01
UBR4-211ENST00000467272 MDM2Q00987 491 aaPredicted RBP14.97□□□□□ -0.01
UBR4-211ENST00000467272 SSH3Q8TE77 659 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms