RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 HLA-CQ95604 372 aa8.84□□□□□ -0.99
SND1-205ENST00000467238 VEZTQ9HBM0 779 aa8.84□□□□□ -0.99
SND1-205ENST00000467238 SERPINA10Q9UK55 444 aa8.84□□□□□ -0.99
SND1-205ENST00000467238 FZD1Q9UP38 647 aa8.84□□□□□ -0.99
SND1-205ENST00000467238 DOCK3Q8IZD9 2030 aa8.83□□□□□ -1
SND1-205ENST00000467238 PDE8BO95263 885 aa8.83□□□□□ -1
SND1-205ENST00000467238 RBM5P52756 815 aaKnown RBP eCLIP8.83□□□□□ -1
SND1-205ENST00000467238 USP46P62068 366 aa8.83□□□□□ -1
SND1-205ENST00000467238 SREBF2Q12772 1141 aa8.83□□□□□ -1
SND1-205ENST00000467238 METTL24Q5JXM2 366 aa8.83□□□□□ -1
SND1-205ENST00000467238 FBXO33Q7Z6M2 555 aa8.83□□□□□ -1
SND1-205ENST00000467238 KLHDC4Q8TBB5 520 aa8.83□□□□□ -1
SND1-205ENST00000467238 TTF2Q9UNY4 1162 aaKnown RBP8.83□□□□□ -1
SND1-205ENST00000467238 UNCXA6NJT0 531 aa8.82□□□□□ -1
SND1-205ENST00000467238 PPP1R12BO60237 982 aaPredicted RBP8.82□□□□□ -1
SND1-205ENST00000467238 TBC1D8O95759 1140 aa8.82□□□□□ -1
SND1-205ENST00000467238 CT47B1P0C2W7 299 aaPredicted RBP8.82□□□□□ -1
SND1-205ENST00000467238 RFX5P48382 616 aaPredicted RBP8.82□□□□□ -1
SND1-205ENST00000467238 MDM2Q00987 491 aaPredicted RBP8.82□□□□□ -1
SND1-205ENST00000467238 GRIK5Q16478 980 aa8.82□□□□□ -1
SND1-205ENST00000467238 SUPT20HL1Q3ZLR7 823 aa8.82□□□□□ -1
SND1-205ENST00000467238 NOM1Q5C9Z4 860 aaKnown RBP8.82□□□□□ -1
SND1-205ENST00000467238 XP32Q5T750 250 aa8.82□□□□□ -1
SND1-205ENST00000467238 NBPF12Q5TAG4 269 aaPredicted RBP8.82□□□□□ -1
SND1-205ENST00000467238 CTU1Q7Z7A3 348 aaKnown RBP8.82□□□□□ -1
SND1-205ENST00000467238 VPS37DQ86XT2 251 aa8.82□□□□□ -1
SND1-205ENST00000467238 ZNF296Q8WUU4 475 aaPredicted RBP8.82□□□□□ -1
SND1-205ENST00000467238 CFHR5Q9BXR6 569 aa8.82□□□□□ -1
SND1-205ENST00000467238 SMC4Q9NTJ3 1288 aa8.82□□□□□ -1
SND1-205ENST00000467238 IQSEC3Q9UPP2 1182 aaPredicted RBP8.82□□□□□ -1
SND1-205ENST00000467238 PTPRFP10586 1907 aa8.82□□□□□ -1
SND1-205ENST00000467238 KIF16BQ96L93 1317 aa8.81□□□□□ -1
SND1-205ENST00000467238 ZBTB48P10074 688 aaPredicted RBP8.81□□□□□ -1
SND1-205ENST00000467238 FGFR2P21802 821 aa8.81□□□□□ -1
SND1-205ENST00000467238 CLCN1P35523 988 aa8.81□□□□□ -1
SND1-205ENST00000467238 CRKP46108 304 aa8.81□□□□□ -1
SND1-205ENST00000467238 MLLT1Q03111 559 aaPredicted RBP8.81□□□□□ -1
SND1-205ENST00000467238 CHAF1AQ13111 956 aaPredicted RBP8.81□□□□□ -1
SND1-205ENST00000467238 TNFAIP1Q13829 316 aa8.81□□□□□ -1
SND1-205ENST00000467238 RASA3Q14644 834 aa8.81□□□□□ -1
SND1-205ENST00000467238 CAVIN4Q5BKX8 364 aa8.81□□□□□ -1
SND1-205ENST00000467238 MRPL14Q6P1L8 145 aaKnown RBP8.81□□□□□ -1
SND1-205ENST00000467238 DZIP1LQ8IYY4 767 aaKnown RBP8.81□□□□□ -1
SND1-205ENST00000467238 TBC1D22AQ8WUA7 517 aa8.81□□□□□ -1
SND1-205ENST00000467238 CLMNQ96JQ2 1002 aa8.81□□□□□ -1
SND1-205ENST00000467238 PURBQ96QR8 312 aaKnown RBP8.81□□□□□ -1
SND1-205ENST00000467238 TDRD3Q9H7E2 651 aaKnown RBP8.81□□□□□ -1
SND1-205ENST00000467238 ZNF70Q9UC06 446 aaPredicted RBP8.81□□□□□ -1
SND1-205ENST00000467238 MYO5AQ9Y4I1 1855 aaKnown RBP8.81□□□□□ -1
SND1-205ENST00000467238 DOCK2Q92608 1830 aa8.8□□□□□ -1
SND1-205ENST00000467238 MANSC4A6NHS7 340 aaPredicted RBP8.8□□□□□ -1
SND1-205ENST00000467238 CCER2I3L3R5 266 aa8.8□□□□□ -1
SND1-205ENST00000467238 GPR25O00155 361 aa8.8□□□□□ -1
SND1-205ENST00000467238 EYA2O00167 538 aa8.8□□□□□ -1
SND1-205ENST00000467238 HOXA2O43364 376 aa8.8□□□□□ -1
SND1-205ENST00000467238 USP2O75604 605 aaPredicted RBP8.8□□□□□ -1
SND1-205ENST00000467238 IREB2P48200 963 aaKnown RBP8.8□□□□□ -1
SND1-205ENST00000467238 HDLBPQ00341 1268 aaKnown RBP8.8□□□□□ -1
SND1-205ENST00000467238 PUM3Q15397 648 aaKnown RBP8.8□□□□□ -1
SND1-205ENST00000467238 SLC10A4Q96EP9 437 aa8.8□□□□□ -1
SND1-205ENST00000467238 WNK4Q96J92 1243 aa8.8□□□□□ -1
SND1-205ENST00000467238 TEPSINQ96N21 525 aa8.8□□□□□ -1
SND1-205ENST00000467238 R3HDMLQ9H3Y0 253 aa8.8□□□□□ -1
SND1-205ENST00000467238 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
SND1-205ENST00000467238 FAM217BQ9NTX9 383 aaPredicted RBP8.8□□□□□ -1
SND1-205ENST00000467238 TRIOBPQ9H2D6 2365 aa8.8□□□□□ -1
SND1-205ENST00000467238 RBBP6Q7Z6E9 1792 aaKnown RBP8.79□□□□□ -1
SND1-205ENST00000467238 FRAT2O75474 233 aaPredicted RBP8.79□□□□□ -1
SND1-205ENST00000467238 IFIT1P09914 478 aaKnown RBP8.79□□□□□ -1
SND1-205ENST00000467238 UBTFL1P0CB47 393 aaPredicted RBP8.79□□□□□ -1
SND1-205ENST00000467238 GJA5P36382 358 aa8.79□□□□□ -1
SND1-205ENST00000467238 INHBEP58166 350 aa8.79□□□□□ -1
SND1-205ENST00000467238 SH3BP2P78314 561 aa8.79□□□□□ -1
SND1-205ENST00000467238 KRT76Q01546 638 aa8.79□□□□□ -1
SND1-205ENST00000467238 PKN2Q16513 984 aaKnown RBP8.79□□□□□ -1
SND1-205ENST00000467238 ATG9AQ7Z3C6 839 aa8.79□□□□□ -1
SND1-205ENST00000467238 ANKRD13AQ8IZ07 590 aa8.79□□□□□ -1
SND1-205ENST00000467238 MRIQ9BWK5 157 aa8.79□□□□□ -1
SND1-205ENST00000467238 TMEM39BQ9GZU3 492 aa8.79□□□□□ -1
SND1-205ENST00000467238 NOB1Q9ULX3 412 aaKnown RBP8.79□□□□□ -1
SND1-205ENST00000467238 SUGT1Q9Y2Z0 365 aa8.79□□□□□ -1
SND1-205ENST00000467238 TCP10L2B9ZVM9 353 aa8.78□□□□□ -1
SND1-205ENST00000467238 IGF2BP3O00425 579 aaKnown RBP eCLIP8.78□□□□□ -1
SND1-205ENST00000467238 FKTNO75072 461 aa8.78□□□□□ -1
SND1-205ENST00000467238 CIAO1O76071 339 aa8.78□□□□□ -1
SND1-205ENST00000467238 SLC5A1P13866 664 aa8.78□□□□□ -1
SND1-205ENST00000467238 TNNI2P48788 182 aa8.78□□□□□ -1
SND1-205ENST00000467238 RARSP54136 660 aaKnown RBP8.78□□□□□ -1
SND1-205ENST00000467238 APOBEC3HQ6NTF7 200 aaKnown RBP8.78□□□□□ -1
SND1-205ENST00000467238 LPIN2Q92539 896 aa8.78□□□□□ -1
SND1-205ENST00000467238 TEKT1Q969V4 418 aa8.78□□□□□ -1
SND1-205ENST00000467238 ZDHHC15Q96MV8 337 aa8.78□□□□□ -1
SND1-205ENST00000467238 API5Q9BZZ5 524 aaKnown RBP8.78□□□□□ -1
SND1-205ENST00000467238 MGAMO43451 1857 aa8.78□□□□□ -1
SND1-205ENST00000467238 CDK5RAP2Q96SN8 1893 aa8.78□□□□□ -1
SND1-205ENST00000467238 MAST3O60307 1309 aa8.78□□□□□ -1
SND1-205ENST00000467238 ZSWIM8A7E2V4 1837 aa8.77□□□□□ -1
SND1-205ENST00000467238 RPAP1Q9BWH6 1393 aaPredicted RBP8.77□□□□□ -1.01
SND1-205ENST00000467238 JUNDP17535 347 aa8.77□□□□□ -1.01
SND1-205ENST00000467238 CACNB3P54284 484 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms