RNA–Protein interactions for RNA: ENST00000465200.5

LCLAT1-204, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-204ENST00000465200 ZNF333Q96JL9 665 aa12.5□□□□□ -0.41
LCLAT1-204ENST00000465200 IDI2Q9BXS1 227 aa12.5□□□□□ -0.41
LCLAT1-204ENST00000465200 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
LCLAT1-204ENST00000465200 DDX60LQ5H9U9 1706 aaKnown RBP12.5□□□□□ -0.41
LCLAT1-204ENST00000465200 COL2A1P02458 1487 aaPredicted RBP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 IGF2BP3O00425 579 aaKnown RBP eCLIP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 ST18O60284 1047 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 CASTP20810 708 aaKnown RBP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 NT5C2P49902 561 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 RBM5P52756 815 aaKnown RBP eCLIP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 DLGAP5Q15398 846 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 NBPF9Q3BBW0 867 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 SLC9C1Q4G0N8 1177 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 MAPKAPK5Q8IW41 473 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 AMOTL1Q8IY63 956 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 ZBED3Q96IU2 234 aaPredicted RBP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 NEK1Q96PY6 1258 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 UPF3BQ9BZI7 483 aaKnown RBP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 OSBPL5Q9H0X9 879 aaPredicted RBP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 RNF41Q9H4P4 317 aaPredicted RBP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 MCM9Q9NXL9 1143 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 ANGEL1Q9UNK9 670 aaKnown RBP12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 PCDHAC2Q9Y5I4 1007 aa12.49□□□□□ -0.41
LCLAT1-204ENST00000465200 CENPFP49454 3210 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 USP17L12C9JPN9 530 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 USP17L21D6R901 530 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 RPS6KB1P23443 525 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 CRHR2Q13324 411 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 AKNAD1Q5T1N1 836 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 BLOC1S2Q6QNY1 142 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 RUFY3Q7L099 469 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 DPF3Q92784 378 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 PRMT6Q96LA8 375 aaPredicted RBP12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 TTC14Q96N46 770 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 DDX4Q9NQI0 724 aaKnown RBP12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 LAMA4Q16363 1823 aa12.48□□□□□ -0.41
LCLAT1-204ENST00000465200 CEP290O15078 2479 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 NEDD4P46934 1319 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 MINDY4BA8MYZ0 360 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 SLC3A2P08195 630 aaKnown RBP12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 FGRP09769 529 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 MCM2P49736 904 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 NEK4P51957 841 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 INHBEP58166 350 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 SP3Q02447 781 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 NFIAQ12857 509 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 TRDNQ13061 729 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 PICALMQ13492 652 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 BECN1Q14457 450 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 SPDYE2Q495Y8 402 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 C12orf60Q5U649 245 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 FKBP1CQ5VVH2 108 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 RALYLQ86SE5 291 aaKnown RBP12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 NBPF11Q86T75 865 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 HSCBQ8IWL3 235 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 MB21D2Q8IYB1 491 aaPredicted RBP12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 NCOA7Q8NI08 942 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 CNNM2Q9H8M5 875 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 TMOD2Q9NZR1 351 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 TAOK2Q9UL54 1235 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 PTCH2Q9Y6C5 1203 aa12.47□□□□□ -0.41
LCLAT1-204ENST00000465200 ATRNL1Q5VV63 1379 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 CYP2D7A0A087X1C5 515 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 WNT10BO00744 389 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 MYO1BO43795 1136 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 ENTPD3O75355 529 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 CD2BP2O95400 341 aaKnown RBP12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 CYP2D6P10635 497 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 CAP1Q01518 475 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 LDLRAD1Q5T700 205 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 MFSD6Q6ZSS7 791 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 DHX32Q7L7V1 743 aaKnown RBP12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 SLC10A4Q96EP9 437 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 TBC1D2Q9BYX2 928 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 KRT23Q9C075 422 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 TDRD3Q9H7E2 651 aaKnown RBP12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 FAM198AQ9UFP1 575 aa12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.46□□□□□ -0.41
LCLAT1-204ENST00000465200 CUL9Q8IWT3 2517 aa12.46□□□□□ -0.42
LCLAT1-204ENST00000465200 MYH2Q9UKX2 1941 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 NAV1Q8NEY1 1877 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 ORC4O43929 436 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 POLR3DP05423 398 aaPredicted RBP12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 CPA1P15085 419 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 COL9A3Q14050 684 aaPredicted RBP12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 TTC6Q86TZ1 520 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 FBXL16Q8N461 479 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 WNK4Q96J92 1243 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 IPO9Q96P70 1041 aaKnown RBP12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 EHD4Q9H223 541 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 DHX36Q9H2U1 1008 aaKnown RBP12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 PDRG1Q9NUG6 133 aa12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 ZNF70Q9UC06 446 aaPredicted RBP12.45□□□□□ -0.42
LCLAT1-204ENST00000465200 SAP30BPQ9UHR5 308 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms