RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 PNMA3Q9UL41 463 aa23.35■■□□□ 1.33
CCHCR1-210ENST00000464012 ZBTB21Q9ULJ3 1066 aa23.35■■□□□ 1.33
CCHCR1-210ENST00000464012 MYPNQ86TC9 1320 aa23.34■■□□□ 1.33
CCHCR1-210ENST00000464012 TCRBV5S4A2TA0A5A2 114 aa23.34■■□□□ 1.33
CCHCR1-210ENST00000464012 FCGRTP55899 365 aa23.34■■□□□ 1.33
CCHCR1-210ENST00000464012 SLFNL1Q499Z3 407 aa23.34■■□□□ 1.33
CCHCR1-210ENST00000464012 LCORLQ8N3X6 602 aa23.34■■□□□ 1.33
CCHCR1-210ENST00000464012 HAUS7Q99871 368 aa23.34■■□□□ 1.33
CCHCR1-210ENST00000464012 SRRDQ9UH36 339 aa23.34■■□□□ 1.33
CCHCR1-210ENST00000464012 HOXD10P28358 340 aa23.33■■□□□ 1.33
CCHCR1-210ENST00000464012 PRMT2P55345 433 aa23.33■■□□□ 1.33
CCHCR1-210ENST00000464012 RRP1P56182 461 aaKnown RBP23.33■■□□□ 1.33
CCHCR1-210ENST00000464012 TTC6Q86TZ1 520 aa23.33■■□□□ 1.33
CCHCR1-210ENST00000464012 ANKRD13CQ8N6S4 541 aa23.33■■□□□ 1.33
CCHCR1-210ENST00000464012 RAET1EQ8TD07 263 aa23.33■■□□□ 1.33
CCHCR1-210ENST00000464012 WDR18Q9BV38 432 aa23.33■■□□□ 1.33
CCHCR1-210ENST00000464012 SERPINB13Q9UIV8 391 aa23.33■■□□□ 1.33
CCHCR1-210ENST00000464012 DOCK3Q8IZD9 2030 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 GH2P01242 217 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 POLR3DP05423 398 aaPredicted RBP23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 ADD2P35612 726 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 PABPC4Q13310 644 aaKnown RBP eCLIP23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 SH3D19Q5HYK7 790 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 SDR42E1Q8WUS8 393 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 TMEM106CQ9BVX2 250 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.32■■□□□ 1.322e-11■■■■□ 20.2
CCHCR1-210ENST00000464012 EHD4Q9H223 541 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 ARMT1Q9H993 441 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 TMOD4Q9NZQ9 345 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 CENPFP49454 3210 aa23.32■■□□□ 1.32
CCHCR1-210ENST00000464012 KIAA0100Q14667 2235 aaKnown RBP23.31■■□□□ 1.32
CCHCR1-210ENST00000464012 PLCD1P51178 756 aa23.31■■□□□ 1.32
CCHCR1-210ENST00000464012 BACE1P56817 501 aa23.31■■□□□ 1.32
CCHCR1-210ENST00000464012 PRKCZQ05513 592 aa23.31■■□□□ 1.32
CCHCR1-210ENST00000464012 MCM9Q9NXL9 1143 aa23.31■■□□□ 1.32
CCHCR1-210ENST00000464012 MBD4O95243 580 aa23.3■■□□□ 1.32
CCHCR1-210ENST00000464012 CHGBP05060 677 aa23.3■■□□□ 1.32
CCHCR1-210ENST00000464012 EN2P19622 333 aaPredicted RBP23.3■■□□□ 1.32
CCHCR1-210ENST00000464012 EVX2Q03828 476 aa23.3■■□□□ 1.32
CCHCR1-210ENST00000464012 ASCC2Q9H1I8 757 aaPredicted RBP23.3■■□□□ 1.32
CCHCR1-210ENST00000464012 DCTPP1Q9H773 170 aa23.3■■□□□ 1.32
CCHCR1-210ENST00000464012 GINM1Q9NU53 330 aa23.3■■□□□ 1.32
CCHCR1-210ENST00000464012 GABRQQ9UN88 632 aa23.3■■□□□ 1.32
CCHCR1-210ENST00000464012 USP17L10C9JJH3 530 aa23.29■■□□□ 1.32
CCHCR1-210ENST00000464012 TNPO2O14787 897 aaKnown RBP23.29■■□□□ 1.32
CCHCR1-210ENST00000464012 IRX3P78415 501 aaPredicted RBP23.29■■□□□ 1.32
CCHCR1-210ENST00000464012 RAB3GAP1Q15042 981 aa23.29■■□□□ 1.32
CCHCR1-210ENST00000464012 ZYXQ15942 572 aaKnown RBP23.29■■□□□ 1.32
CCHCR1-210ENST00000464012 CERKLQ49MI3 558 aaPredicted RBP23.29■■□□□ 1.32
CCHCR1-210ENST00000464012 TSHZ3Q63HK5 1081 aa23.29■■□□□ 1.32
CCHCR1-210ENST00000464012 TATDN1Q6P1N9 297 aa23.29■■□□□ 1.32
CCHCR1-210ENST00000464012 GRK4P32298 578 aa23.28■■□□□ 1.32
CCHCR1-210ENST00000464012 FEZ1Q99689 392 aa23.28■■□□□ 1.32
CCHCR1-210ENST00000464012 DCP1AQ9NPI6 582 aaPredicted RBP23.28■■□□□ 1.32
CCHCR1-210ENST00000464012 ECHDC1Q9NTX5 307 aa23.28■■□□□ 1.32
CCHCR1-210ENST00000464012 PCDHB15Q9Y5E8 787 aa23.28■■□□□ 1.32
CCHCR1-210ENST00000464012 PDE4DIPQ5VU43 2346 aa23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 C19orf81C9J6K1 198 aa23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 PRKAB2O43741 272 aa23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 CYP2D6P10635 497 aa23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 SHMT1P34896 483 aa23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 FAM110CQ1W6H9 321 aa23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 ABCB5Q2M3G0 1257 aa23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 GPATCH3Q96I76 525 aa23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 BIN2Q9UBW5 565 aaPredicted RBP23.27■■□□□ 1.32
CCHCR1-210ENST00000464012 GCLCP48506 637 aaPredicted RBP23.26■■□□□ 1.31
CCHCR1-210ENST00000464012 CRBNQ96SW2 442 aa23.26■■□□□ 1.31
CCHCR1-210ENST00000464012 CABP5Q9NP86 173 aa23.26■■□□□ 1.31
CCHCR1-210ENST00000464012 TAOK2Q9UL54 1235 aa23.26■■□□□ 1.31
CCHCR1-210ENST00000464012 MTFR1Q15390 333 aa23.25■■□□□ 1.31
CCHCR1-210ENST00000464012 ZSCAN25Q6NSZ9 544 aa23.25■■□□□ 1.31
CCHCR1-210ENST00000464012 MPHOSPH10O00566 681 aaKnown RBP23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 FLT3LGP49771 235 aa23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 GABPAQ06546 454 aa23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 UBE3CQ15386 1083 aa23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 USP17L2Q6R6M4 530 aa23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 SLC44A5Q8NCS7 719 aa23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 COA7Q96BR5 231 aa23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 EMILIN3Q9NT22 766 aa23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 PLXNB2O15031 1838 aa23.24■■□□□ 1.31
CCHCR1-210ENST00000464012 PEX10O60683 326 aa23.23■■□□□ 1.31
CCHCR1-210ENST00000464012 P2RX7Q99572 595 aaKnown RBP23.23■■□□□ 1.31
CCHCR1-210ENST00000464012 ADCY3O60266 1144 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 ELNP15502 786 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 HOXA7P31268 230 aaPredicted RBP23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 HERVK_113P62684 666 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 SEPT2Q15019 361 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 SLAIN1Q8ND83 568 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 ACER1Q8TDN7 264 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 DYNLL2Q96FJ2 89 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 PUS7LQ9H0K6 701 aaKnown RBP23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 ATP8A2Q9NTI2 1148 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 SLC4A4Q9Y6R1 1079 aa23.22■■□□□ 1.31
CCHCR1-210ENST00000464012 CYP2D7A0A087X1C5 515 aa23.21■■□□□ 1.31
CCHCR1-210ENST00000464012 GUCY1A2P33402 732 aa23.21■■□□□ 1.31
CCHCR1-210ENST00000464012 UBXN2AP68543 259 aa23.21■■□□□ 1.31
CCHCR1-210ENST00000464012 DDRGK1Q96HY6 314 aa23.21■■□□□ 1.31
CCHCR1-210ENST00000464012 CCL5P13501 91 aa23.2■■□□□ 1.3
CCHCR1-210ENST00000464012 AMOTL1Q8IY63 956 aa23.2■■□□□ 1.3
CCHCR1-210ENST00000464012 KBTBD3Q8NAB2 608 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms