RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 DEFB118Q96PH6 123 aa9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 DNAJC18Q9H819 358 aa9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 AKAP2Q9Y2D5 859 aa9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 COG6Q9Y2V7 657 aa9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 PARP14Q460N5 1801 aa9.75□□□□□ -0.85
CDC42BPA-210ENST00000462553 RLFQ13129 1914 aa9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 MAP4K4O95819 1239 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 MNX1P50219 401 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 HMGCS2P54868 508 aa9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 JAG1P78504 1218 aa9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 ATP8B2P98198 1209 aa9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 SPP2Q13103 211 aa9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 SHROOM1Q2M3G4 852 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 ZNF280CQ8ND82 737 aa9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 SH3RF3Q8TEJ3 882 aaPredicted RBP9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 PNMA3Q9UL41 463 aa9.74□□□□□ -0.85
CDC42BPA-210ENST00000462553 A0A0G2JMZ2 1700 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 SOX1O00570 391 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 CAP2P40123 477 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 TRIM32Q13049 653 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 SH3D19Q5HYK7 790 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 ADGRA1Q86SQ6 560 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 TEX11Q8IYF3 940 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 NEUROD6Q96NK8 337 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 PHF12Q96QT6 1004 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 ASCC2Q9H1I8 757 aaPredicted RBP9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 ZBTB40Q9NUA8 1239 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 GJD2Q9UKL4 321 aa9.73□□□□□ -0.85
CDC42BPA-210ENST00000462553 LTBP2Q14767 1821 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 SPTBN5Q9NRC6 3674 aaKnown RBP9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 MYH7P12883 1935 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 PEX10O60683 326 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 HMGCRP04035 888 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 MS4A1P11836 297 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 GCLCP48506 637 aaPredicted RBP9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 GSTO1P78417 241 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 METTL16Q86W50 562 aaKnown RBP9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 SIRT2Q8IXJ6 389 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 TRIB2Q92519 343 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 COA7Q96BR5 231 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 PAWRQ96IZ0 340 aaKnown RBP9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 TBC1D2Q9BYX2 928 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 RAI14Q9P0K7 980 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 MORF4L1Q9UBU8 362 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 HERC5Q9UII4 1024 aaKnown RBP9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 TAOK2Q9UL54 1235 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 DDX19BQ9UMR2 479 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 NOP58Q9Y2X3 529 aaKnown RBP9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 NR2E3Q9Y5X4 410 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 FLT1P17948 1338 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 ZNF236Q9UL36 1845 aa9.72□□□□□ -0.85
CDC42BPA-210ENST00000462553 A0A1W2PPC1 479 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 USP17L5A8MUK1 530 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 POTEB2H3BUK9 544 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 EVI5O60447 810 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 TFRCP02786 760 aaKnown RBP9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 LDHCP07864 332 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 CAPN2P17655 700 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 MTMR2Q13614 643 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 MAP3K21Q5TCX8 1036 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 POTEEQ6S8J3 1075 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 WDR18Q9BV38 432 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 TXNRD2Q9NNW7 524 aa9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 AATFQ9NY61 560 aaKnown RBP eCLIP9.71□□□□□ -0.86
CDC42BPA-210ENST00000462553 COL11A1P12107 1806 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 ZNFX1Q9P2E3 1918 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 BAZ2AQ9UIF9 1905 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 CYP2E1P05181 493 aaPredicted RBP9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 UQCRFS1P1P0C7P4 283 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 RRP1P56182 461 aaKnown RBP9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 BACE1P56817 501 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 PPP4CP60510 307 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 G3BP1Q13283 466 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 PABPC4Q13310 644 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 TNNI3KQ59H18 835 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 POTEGQ6S5H5 508 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 MAPKAPK5Q8IW41 473 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 ANKLE1Q8NAG6 615 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 LRCH3Q96II8 777 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 GDF15Q99988 308 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 DBNDD2Q9BQY9 259 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 GPR108Q9NPR9 543 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 SNRKQ9NRH2 765 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 PI4KBQ9UBF8 816 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 STAP2Q9UGK3 403 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 FPGT-TNNI3KV9GXZ4 949 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 PFASO15067 1338 aa9.7□□□□□ -0.86
CDC42BPA-210ENST00000462553 GDF11O95390 407 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 ASNSP08243 561 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 HOXA7P31268 230 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 HERVK_113P62684 666 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 GORABQ5T7V8 394 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 NAA16Q6N069 864 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 MAMSTRQ6ZN01 415 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 NECAB2Q7Z6G3 386 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 C7orf61Q8IZ16 206 aa9.69□□□□□ -0.86
CDC42BPA-210ENST00000462553 RPTORQ8N122 1335 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms